RNA–Protein interactions for RNA: ENST00000418212.5

BDNF-208, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,125 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-208ENST00000418212 FUNDC2Q9BWH2 189 aa12.53□□□□□ -0.4
BDNF-208ENST00000418212 ALOXE3Q9BYJ1 711 aa12.53□□□□□ -0.4
BDNF-208ENST00000418212 PTGES2Q9H7Z7 377 aa12.53□□□□□ -0.4
BDNF-208ENST00000418212 LAMP5Q9UJQ1 280 aa12.53□□□□□ -0.4
BDNF-208ENST00000418212 OR7A17O14581 309 aa12.53□□□□□ -0.4
BDNF-208ENST00000418212 ORC5O43913 435 aa12.53□□□□□ -0.4
BDNF-208ENST00000418212 B3GALT4O96024 378 aa12.53□□□□□ -0.4
BDNF-208ENST00000418212 RETP07949 1114 aa12.53□□□□□ -0.4
BDNF-208ENST00000418212 MTHFD2P13995 350 aa12.53□□□□□ -0.4
BDNF-208ENST00000418212 CBLBQ13191 982 aa12.53□□□□□ -0.4
BDNF-208ENST00000418212 ZNF791Q3KP31 576 aaPredicted RBP12.53□□□□□ -0.4
BDNF-208ENST00000418212 TMEM151AQ8N4L1 468 aa12.53□□□□□ -0.4
BDNF-208ENST00000418212 TMIEQ8NEW7 156 aa12.53□□□□□ -0.4
BDNF-208ENST00000418212 GNPDA2Q8TDQ7 276 aa12.53□□□□□ -0.4
BDNF-208ENST00000418212 HCAR2Q8TDS4 363 aa12.53□□□□□ -0.4
BDNF-208ENST00000418212 PDLIM5Q96HC4 596 aaKnown RBP12.53□□□□□ -0.4
BDNF-208ENST00000418212 TEX37Q96LM6 180 aa12.53□□□□□ -0.4
BDNF-208ENST00000418212 DCAF13Q9NV06 445 aaKnown RBP12.53□□□□□ -0.4
BDNF-208ENST00000418212 RIMS3Q9UJD0 308 aa12.53□□□□□ -0.4
BDNF-208ENST00000418212 NRAPQ86VF7 1730 aa12.53□□□□□ -0.4
BDNF-208ENST00000418212 FAM171A2A8MVW0 826 aa12.52□□□□□ -0.4
BDNF-208ENST00000418212 K7ESM1 405 aa12.52□□□□□ -0.4
BDNF-208ENST00000418212 MT-ND5P03915 603 aa12.52□□□□□ -0.4
BDNF-208ENST00000418212 MMP2P08253 660 aa12.52□□□□□ -0.4
BDNF-208ENST00000418212 NDUFV2P19404 249 aa12.52□□□□□ -0.4
BDNF-208ENST00000418212 DDCP20711 480 aa12.52□□□□□ -0.4
BDNF-208ENST00000418212 CPOXP36551 454 aa12.52□□□□□ -0.4
BDNF-208ENST00000418212 STARP49675 285 aa12.52□□□□□ -0.4
BDNF-208ENST00000418212 FCHO2Q0JRZ9 810 aa12.52□□□□□ -0.4
BDNF-208ENST00000418212 CCINQ13939 588 aa12.52□□□□□ -0.4
BDNF-208ENST00000418212 SYPL1Q16563 259 aa12.52□□□□□ -0.4
BDNF-208ENST00000418212 OR56A3Q8NH54 315 aa12.52□□□□□ -0.4
BDNF-208ENST00000418212 ZNF300Q96RE9 604 aaPredicted RBP12.52□□□□□ -0.4
BDNF-208ENST00000418212 SIAEQ9HAT2 523 aa12.52□□□□□ -0.4
BDNF-208ENST00000418212 MCCC2Q9HCC0 563 aa12.52□□□□□ -0.4
BDNF-208ENST00000418212 ARMC1Q9NVT9 282 aa12.52□□□□□ -0.4
BDNF-208ENST00000418212 USP36Q9P275 1121 aaKnown RBP12.52□□□□□ -0.4
BDNF-208ENST00000418212 UNC13CQ8NB66 2214 aa12.52□□□□□ -0.4
BDNF-208ENST00000418212 EP400Q96L91 3159 aa12.52□□□□□ -0.4
BDNF-208ENST00000418212 ZNF20P17024 532 aa12.52□□□□□ -0.4
BDNF-208ENST00000418212 FBLP22087 321 aaKnown RBP12.52□□□□□ -0.4
BDNF-208ENST00000418212 SCRN3Q0VDG4 424 aa12.52□□□□□ -0.4
BDNF-208ENST00000418212 TUBA3CQ13748 450 aa12.52□□□□□ -0.4
BDNF-208ENST00000418212 PLBD1Q6P4A8 553 aa12.52□□□□□ -0.4
BDNF-208ENST00000418212 KLBQ86Z14 1044 aa12.52□□□□□ -0.4
BDNF-208ENST00000418212 DCP2Q8IU60 420 aaKnown RBP12.52□□□□□ -0.4
BDNF-208ENST00000418212 FUNDC1Q8IVP5 155 aa12.52□□□□□ -0.4
BDNF-208ENST00000418212 ADAMTS19Q8TE59 1207 aa12.52□□□□□ -0.4
BDNF-208ENST00000418212 TRUB1Q8WWH5 349 aaKnown RBP12.52□□□□□ -0.4
BDNF-208ENST00000418212 NMNAT1Q9HAN9 279 aaPredicted RBP12.52□□□□□ -0.4
BDNF-208ENST00000418212 DIABLOQ9NR28 239 aa12.52□□□□□ -0.4
BDNF-208ENST00000418212 PAK1IP1Q9NWT1 392 aaPredicted RBP12.52□□□□□ -0.4
BDNF-208ENST00000418212 PRSS38A1L453 326 aa12.52□□□□□ -0.41
BDNF-208ENST00000418212 HIST1H1TP22492 207 aaPredicted RBP12.52□□□□□ -0.41
BDNF-208ENST00000418212 DCKP27707 260 aa12.52□□□□□ -0.41
BDNF-208ENST00000418212 OR2B6P58173 313 aa12.52□□□□□ -0.41
BDNF-208ENST00000418212 CLCA4Q14CN2 919 aa12.52□□□□□ -0.41
BDNF-208ENST00000418212 TMEM240Q5SV17 173 aa12.52□□□□□ -0.41
BDNF-208ENST00000418212 FCRLBQ6BAA4 426 aa12.52□□□□□ -0.41
BDNF-208ENST00000418212 PLXDC1Q8IUK5 500 aa12.52□□□□□ -0.41
BDNF-208ENST00000418212 CDCA3Q99618 268 aaPredicted RBP12.52□□□□□ -0.41
BDNF-208ENST00000418212 BRF2Q9HAW0 419 aa12.52□□□□□ -0.41
BDNF-208ENST00000418212 C14orf119Q9NWQ9 140 aa12.52□□□□□ -0.41
BDNF-208ENST00000418212 CPNE7Q9UBL6 633 aa12.52□□□□□ -0.41
BDNF-208ENST00000418212 TBX21Q9UL17 535 aa12.52□□□□□ -0.41
BDNF-208ENST00000418212 PCDHGA8Q9Y5G5 932 aa12.52□□□□□ -0.41
BDNF-208ENST00000418212 CSNK1G3Q9Y6M4 447 aa12.52□□□□□ -0.41
BDNF-208ENST00000418212 PRRT4C9JH25 899 aa12.52□□□□□ -0.41
BDNF-208ENST00000418212 AQP9O43315 295 aa12.52□□□□□ -0.41
BDNF-208ENST00000418212 ITGA3P26006 1051 aa12.52□□□□□ -0.41
BDNF-208ENST00000418212 MMP12P39900 470 aa12.52□□□□□ -0.41
BDNF-208ENST00000418212 ZNF41P51814 821 aaPredicted RBP12.52□□□□□ -0.41
BDNF-208ENST00000418212 EXOSC7Q15024 291 aaKnown RBP12.52□□□□□ -0.41
BDNF-208ENST00000418212 MAPK14Q16539 360 aa12.52□□□□□ -0.41
BDNF-208ENST00000418212 LRFN4Q6PJG9 635 aa12.52□□□□□ -0.41
BDNF-208ENST00000418212 Q6ZPB1 254 aaPredicted RBP12.52□□□□□ -0.41
BDNF-208ENST00000418212 TSPYL5Q86VY4 417 aaPredicted RBP12.52□□□□□ -0.41
BDNF-208ENST00000418212 MCOLN1Q9GZU1 580 aa12.52□□□□□ -0.41
BDNF-208ENST00000418212 C19orf25Q9UFG5 118 aaPredicted RBP12.52□□□□□ -0.41
BDNF-208ENST00000418212 PLCL2Q9UPR0 1127 aa12.52□□□□□ -0.41
BDNF-208ENST00000418212 PCDHGB1Q9Y5G3 927 aa12.52□□□□□ -0.41
BDNF-208ENST00000418212 DOCK3Q8IZD9 2030 aa12.51□□□□□ -0.41
BDNF-208ENST00000418212 COL4A1P02462 1669 aa12.51□□□□□ -0.41
BDNF-208ENST00000418212 PRAMEF26H0Y7S4 382 aa12.51□□□□□ -0.41
BDNF-208ENST00000418212 H7C0S8 307 aa12.51□□□□□ -0.41
BDNF-208ENST00000418212 NPC1O15118 1278 aa12.51□□□□□ -0.41
BDNF-208ENST00000418212 CACNG3O60359 315 aa12.51□□□□□ -0.41
BDNF-208ENST00000418212 ZNF217O75362 1048 aa12.51□□□□□ -0.41
BDNF-208ENST00000418212 OR3A3P47888 321 aa12.51□□□□□ -0.41
BDNF-208ENST00000418212 OR3A2P47893 321 aa12.51□□□□□ -0.41
BDNF-208ENST00000418212 NR0B1P51843 470 aaKnown RBP12.51□□□□□ -0.41
BDNF-208ENST00000418212 EMP3P54852 163 aa12.51□□□□□ -0.41
BDNF-208ENST00000418212 RASGEF1BQ0VAM2 473 aa12.51□□□□□ -0.41
BDNF-208ENST00000418212 SF3B4Q15427 424 aaKnown RBP eCLIP12.51□□□□□ -0.41
BDNF-208ENST00000418212 TUBA3EQ6PEY2 450 aa12.51□□□□□ -0.41
BDNF-208ENST00000418212 LCTLQ6UWM7 567 aa12.51□□□□□ -0.41
BDNF-208ENST00000418212 ANKRD33Q7Z3H0 272 aa12.51□□□□□ -0.41
BDNF-208ENST00000418212 IGFN1Q86VF2 1251 aa12.51□□□□□ -0.41
BDNF-208ENST00000418212 ACBD7Q8N6N7 88 aa12.51□□□□□ -0.41
BDNF-208ENST00000418212 SAMD12Q8N8I0 201 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms