RNA–Protein interactions for RNA: ENST00000404424.5

CLIP4-204, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLIP4, Length 2,480 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-204ENST00000404424 CALML5Q9NZT1 146 aa10.1□□□□□ -0.79
CLIP4-204ENST00000404424 GPR89AB7ZAQ6 455 aa10.1□□□□□ -0.79
CLIP4-204ENST00000404424 TIMP1P01033 207 aa10.1□□□□□ -0.79
CLIP4-204ENST00000404424 HLA-DQB1P01920 261 aa10.1□□□□□ -0.79
CLIP4-204ENST00000404424 HMGN2P05204 90 aaKnown RBP10.1□□□□□ -0.79
CLIP4-204ENST00000404424 SERPIND1P05546 499 aa10.1□□□□□ -0.79
CLIP4-204ENST00000404424 FHP07954 510 aa10.1□□□□□ -0.79
CLIP4-204ENST00000404424 GPR89BP0CG08 455 aa10.1□□□□□ -0.79
CLIP4-204ENST00000404424 CEBPBP17676 345 aa10.1□□□□□ -0.79
CLIP4-204ENST00000404424 PRKAG1P54619 331 aa10.1□□□□□ -0.79
CLIP4-204ENST00000404424 TAS2R41P59536 307 aa10.1□□□□□ -0.79
CLIP4-204ENST00000404424 ST3GAL3Q11203 375 aa10.1□□□□□ -0.79
CLIP4-204ENST00000404424 LASP1Q14847 261 aaKnown RBP10.1□□□□□ -0.79
CLIP4-204ENST00000404424 GPR19Q15760 415 aa10.1□□□□□ -0.79
CLIP4-204ENST00000404424 GPAT3Q53EU6 434 aa10.1□□□□□ -0.79
CLIP4-204ENST00000404424 ZNF793Q6ZN11 406 aa10.1□□□□□ -0.79
CLIP4-204ENST00000404424 ADCK2Q7Z695 626 aa10.1□□□□□ -0.79
CLIP4-204ENST00000404424 LINC01555Q8NAE3 123 aa10.1□□□□□ -0.79
CLIP4-204ENST00000404424 LILRB4Q8NHJ6 448 aa10.1□□□□□ -0.79
CLIP4-204ENST00000404424 SLC7A6Q92536 515 aa10.1□□□□□ -0.79
CLIP4-204ENST00000404424 NRTNQ99748 197 aa10.1□□□□□ -0.79
CLIP4-204ENST00000404424 ARHGDIGQ99819 225 aa10.1□□□□□ -0.79
CLIP4-204ENST00000404424 SLX1AQ9BQ83 275 aa10.1□□□□□ -0.79
CLIP4-204ENST00000404424 MMP28Q9H239 520 aa10.1□□□□□ -0.79
CLIP4-204ENST00000404424 EGLN3Q9H6Z9 239 aa10.1□□□□□ -0.79
CLIP4-204ENST00000404424 RNF121Q9H920 327 aa10.1□□□□□ -0.79
CLIP4-204ENST00000404424 DEC1Q9P2X7 70 aa10.1□□□□□ -0.79
CLIP4-204ENST00000404424 PRKAG2Q9UGJ0 569 aa10.1□□□□□ -0.79
CLIP4-204ENST00000404424 SLC13A4Q9UKG4 626 aa10.1□□□□□ -0.79
CLIP4-204ENST00000404424 ENTPD4Q9Y227 616 aa10.1□□□□□ -0.79
CLIP4-204ENST00000404424 FAM170BA6NMN3 283 aa10.09□□□□□ -0.79
CLIP4-204ENST00000404424 B4DXG7 233 aa10.09□□□□□ -0.79
CLIP4-204ENST00000404424 TFECO14948 347 aaPredicted RBP10.09□□□□□ -0.79
CLIP4-204ENST00000404424 CHST10O43529 356 aa10.09□□□□□ -0.79
CLIP4-204ENST00000404424 YES1P07947 543 aa10.09□□□□□ -0.79
CLIP4-204ENST00000404424 CFL1P23528 166 aaKnown RBP10.09□□□□□ -0.79
CLIP4-204ENST00000404424 MYL9P24844 172 aa10.09□□□□□ -0.79
CLIP4-204ENST00000404424 HLA-DMAP28067 261 aa10.09□□□□□ -0.79
CLIP4-204ENST00000404424 P2RY2P41231 377 aa10.09□□□□□ -0.79
CLIP4-204ENST00000404424 MLLT3P42568 568 aaPredicted RBP10.09□□□□□ -0.79
CLIP4-204ENST00000404424 CLCNKAP51800 687 aa10.09□□□□□ -0.79
CLIP4-204ENST00000404424 LSM11P83369 360 aaKnown RBP eCLIP10.09□□□□□ -0.79
CLIP4-204ENST00000404424 PRR5P85299 388 aa10.09□□□□□ -0.79
CLIP4-204ENST00000404424 ACSM1Q08AH1 577 aa10.09□□□□□ -0.79
CLIP4-204ENST00000404424 SLAMF1Q13291 335 aa10.09□□□□□ -0.79
CLIP4-204ENST00000404424 DSG2Q14126 1118 aa10.09□□□□□ -0.79
CLIP4-204ENST00000404424 ZNF234Q14588 700 aa10.09□□□□□ -0.79
CLIP4-204ENST00000404424 ZIC1Q15915 447 aa10.09□□□□□ -0.79
CLIP4-204ENST00000404424 ZNF311Q5JNZ3 666 aa10.09□□□□□ -0.79
CLIP4-204ENST00000404424 LCN1P1Q5VSP4 162 aa10.09□□□□□ -0.79
CLIP4-204ENST00000404424 MRM1Q6IN84 353 aaKnown RBP10.09□□□□□ -0.79
CLIP4-204ENST00000404424 RRM2BQ7LG56 351 aa10.09□□□□□ -0.79
CLIP4-204ENST00000404424 PRICKLE2Q7Z3G6 844 aa10.09□□□□□ -0.79
CLIP4-204ENST00000404424 GALNT12Q8IXK2 581 aa10.09□□□□□ -0.79
CLIP4-204ENST00000404424 POGLUT1Q8NBL1 392 aa10.09□□□□□ -0.79
CLIP4-204ENST00000404424 ZNF485Q8NCK3 441 aa10.09□□□□□ -0.79
CLIP4-204ENST00000404424 PSD4Q8NDX1 1056 aa10.09□□□□□ -0.79
CLIP4-204ENST00000404424 ING5Q8WYH8 240 aa10.09□□□□□ -0.79
CLIP4-204ENST00000404424 ZC3HAV1LQ96H79 300 aaKnown RBP10.09□□□□□ -0.79
CLIP4-204ENST00000404424 TM7SF3Q9NS93 570 aa10.09□□□□□ -0.79
CLIP4-204ENST00000404424 MED17Q9NVC6 651 aa10.09□□□□□ -0.79
CLIP4-204ENST00000404424 LIPT1Q9Y234 373 aa10.09□□□□□ -0.79
CLIP4-204ENST00000404424 COL4A3Q01955 1670 aa10.09□□□□□ -0.79
CLIP4-204ENST00000404424 A0A0G2JN53 185 aa10.09□□□□□ -0.79
CLIP4-204ENST00000404424 LINC00854A0A1B0GVQ3 168 aa10.09□□□□□ -0.79
CLIP4-204ENST00000404424 EMC8O43402 210 aa10.09□□□□□ -0.79
CLIP4-204ENST00000404424 SCO2O43819 266 aa10.09□□□□□ -0.79
CLIP4-204ENST00000404424 ERAL1O75616 437 aaKnown RBP10.09□□□□□ -0.79
CLIP4-204ENST00000404424 NFATC1O95644 943 aa10.09□□□□□ -0.79
CLIP4-204ENST00000404424 HLA-DPB1P04440 258 aa10.09□□□□□ -0.79
CLIP4-204ENST00000404424 PCCBP05166 539 aa10.09□□□□□ -0.79
CLIP4-204ENST00000404424 LIMS3P0CW19 117 aa10.09□□□□□ -0.79
CLIP4-204ENST00000404424 LIMS4P0CW20 117 aa10.09□□□□□ -0.79
CLIP4-204ENST00000404424 ACRP10323 421 aa10.09□□□□□ -0.79
CLIP4-204ENST00000404424 ITGB8P26012 769 aa10.09□□□□□ -0.79
CLIP4-204ENST00000404424 STAT5AP42229 794 aa10.09□□□□□ -0.79
CLIP4-204ENST00000404424 SLC6A11P48066 632 aa10.09□□□□□ -0.79
CLIP4-204ENST00000404424 RAB28P51157 221 aa10.09□□□□□ -0.79
CLIP4-204ENST00000404424 FABP5Q01469 135 aa10.09□□□□□ -0.79
CLIP4-204ENST00000404424 DMPKQ09013 629 aa10.09□□□□□ -0.79
CLIP4-204ENST00000404424 MESP2Q0VG99 397 aa10.09□□□□□ -0.79
CLIP4-204ENST00000404424 TYW3Q6IPR3 259 aaKnown RBP10.09□□□□□ -0.79
CLIP4-204ENST00000404424 CAMKK1Q8N5S9 505 aa10.09□□□□□ -0.79
CLIP4-204ENST00000404424 OR52P1PQ8NH57 321 aa10.09□□□□□ -0.79
CLIP4-204ENST00000404424 PIGXQ8TBF5 258 aa10.09□□□□□ -0.79
CLIP4-204ENST00000404424 ENKURQ8TC29 256 aa10.09□□□□□ -0.79
CLIP4-204ENST00000404424 OSTF1Q92882 214 aa10.09□□□□□ -0.79
CLIP4-204ENST00000404424 CHFRQ96EP1 664 aa10.09□□□□□ -0.79
CLIP4-204ENST00000404424 FERD3LQ96RJ6 166 aa10.09□□□□□ -0.79
CLIP4-204ENST00000404424 SOSTQ9BQB4 213 aa10.09□□□□□ -0.79
CLIP4-204ENST00000404424 YIPF2Q9BWQ6 316 aa10.09□□□□□ -0.79
CLIP4-204ENST00000404424 RAB11FIP5Q9BXF6 653 aa10.09□□□□□ -0.79
CLIP4-204ENST00000404424 AICDAQ9GZX7 198 aa10.09□□□□□ -0.79
CLIP4-204ENST00000404424 SLA2Q9H6Q3 261 aa10.09□□□□□ -0.79
CLIP4-204ENST00000404424 TRIM45Q9H8W5 580 aaPredicted RBP10.09□□□□□ -0.79
CLIP4-204ENST00000404424 YARS2Q9Y2Z4 477 aaKnown RBP10.09□□□□□ -0.79
CLIP4-204ENST00000404424 ASB4Q9Y574 426 aa10.09□□□□□ -0.79
CLIP4-204ENST00000404424 PCDHGB7Q9Y5F8 929 aa10.09□□□□□ -0.79
CLIP4-204ENST00000404424 DENND4AQ7Z401 1863 aa10.09□□□□□ -0.79
CLIP4-204ENST00000404424 TCF20Q9UGU0 1960 aaKnown RBP10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms