RNA–Protein interactions for RNA: ENST00000395757.5

SREBF1-205, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SREBF1, Length 3,696 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-205ENST00000395757 ADAMTS16Q8TE57 1224 aa13.6□□□□□ -0.23
SREBF1-205ENST00000395757 TRNT1Q96Q11 434 aaKnown RBP13.6□□□□□ -0.23
SREBF1-205ENST00000395757 TEX12Q9BXU0 123 aa13.6□□□□□ -0.23
SREBF1-205ENST00000395757 NKX2-4Q9H2Z4 354 aa13.6□□□□□ -0.23
SREBF1-205ENST00000395757 NCKAP1Q9Y2A7 1128 aa13.6□□□□□ -0.23
SREBF1-205ENST00000395757 C2orf92A0A1B0GVN3 265 aa13.59□□□□□ -0.23
SREBF1-205ENST00000395757 A0A1W2PR48 441 aa13.59□□□□□ -0.23
SREBF1-205ENST00000395757 ZC3H12DA2A288 527 aaKnown RBP13.59□□□□□ -0.23
SREBF1-205ENST00000395757 SPINT1O43278 529 aa13.59□□□□□ -0.23
SREBF1-205ENST00000395757 GYPBP06028 91 aa13.59□□□□□ -0.23
SREBF1-205ENST00000395757 NR4A2P43354 598 aa13.59□□□□□ -0.23
SREBF1-205ENST00000395757 CENPAP49450 140 aa13.59□□□□□ -0.23
SREBF1-205ENST00000395757 EXOSC7Q15024 291 aaKnown RBP13.59□□□□□ -0.23
SREBF1-205ENST00000395757 DDI2Q5TDH0 399 aa13.59□□□□□ -0.23
SREBF1-205ENST00000395757 FAM111BQ6SJ93 734 aa13.59□□□□□ -0.23
SREBF1-205ENST00000395757 SHISA5Q8N114 240 aa13.59□□□□□ -0.23
SREBF1-205ENST00000395757 GPR32P1Q8NGA4 272 aa13.59□□□□□ -0.23
SREBF1-205ENST00000395757 PIK3R3Q92569 461 aa13.59□□□□□ -0.23
SREBF1-205ENST00000395757 IL21RQ9HBE5 538 aa13.59□□□□□ -0.23
SREBF1-205ENST00000395757 WDR45Q9Y484 360 aa13.59□□□□□ -0.23
SREBF1-205ENST00000395757 PCDHGA3Q9Y5H0 932 aa13.59□□□□□ -0.23
SREBF1-205ENST00000395757 USP34Q70CQ2 3546 aa13.59□□□□□ -0.23
SREBF1-205ENST00000395757 KNTC1P50748 2209 aa13.59□□□□□ -0.23
SREBF1-205ENST00000395757 B4DGG1 531 aa13.59□□□□□ -0.23
SREBF1-205ENST00000395757 H3BQ06 376 aaPredicted RBP13.59□□□□□ -0.23
SREBF1-205ENST00000395757 REM1O75628 298 aa13.59□□□□□ -0.23
SREBF1-205ENST00000395757 PRKACAP17612 351 aa13.59□□□□□ -0.23
SREBF1-205ENST00000395757 MRPL19P49406 292 aaKnown RBP13.59□□□□□ -0.23
SREBF1-205ENST00000395757 KHKP50053 298 aa13.59□□□□□ -0.23
SREBF1-205ENST00000395757 PPP2CBP62714 309 aa13.59□□□□□ -0.23
SREBF1-205ENST00000395757 PPP2CAP67775 309 aa13.59□□□□□ -0.23
SREBF1-205ENST00000395757 INAVAQ3KP66 663 aa13.59□□□□□ -0.23
SREBF1-205ENST00000395757 ITPRIPL2Q3MIP1 535 aa13.59□□□□□ -0.23
SREBF1-205ENST00000395757 TIMM50Q3ZCQ8 353 aa13.59□□□□□ -0.23
SREBF1-205ENST00000395757 ZNF776Q68DI1 518 aaPredicted RBP13.59□□□□□ -0.23
SREBF1-205ENST00000395757 ACSM5Q6NUN0 579 aa13.59□□□□□ -0.23
SREBF1-205ENST00000395757 LCTLQ6UWM7 567 aa13.59□□□□□ -0.23
SREBF1-205ENST00000395757 SLC16A11Q8NCK7 471 aa13.59□□□□□ -0.23
SREBF1-205ENST00000395757 SETD7Q8WTS6 366 aaKnown RBP13.59□□□□□ -0.23
SREBF1-205ENST00000395757 ZFPM2Q8WW38 1151 aa13.59□□□□□ -0.23
SREBF1-205ENST00000395757 PMEPA1Q969W9 287 aa13.59□□□□□ -0.23
SREBF1-205ENST00000395757 NLGN3Q9NZ94 848 aa13.59□□□□□ -0.23
SREBF1-205ENST00000395757 PADI2Q9Y2J8 665 aa13.59□□□□□ -0.23
SREBF1-205ENST00000395757 RP1L1Q8IWN7 2480 aaPredicted RBP13.59□□□□□ -0.23
SREBF1-205ENST00000395757 CD8B2A6NJW9 211 aa13.59□□□□□ -0.23
SREBF1-205ENST00000395757 FOXE1O00358 373 aaPredicted RBP13.59□□□□□ -0.23
SREBF1-205ENST00000395757 PRKYO43930 277 aa13.59□□□□□ -0.23
SREBF1-205ENST00000395757 TSC22D2O75157 780 aa13.59□□□□□ -0.23
SREBF1-205ENST00000395757 CCNKO75909 580 aa13.59□□□□□ -0.23
SREBF1-205ENST00000395757 NCR1O76036 304 aa13.59□□□□□ -0.23
SREBF1-205ENST00000395757 CD8BP10966 210 aa13.59□□□□□ -0.23
SREBF1-205ENST00000395757 LAMP2P13473 410 aa13.59□□□□□ -0.23
SREBF1-205ENST00000395757 ANXA11P50995 505 aaKnown RBP13.59□□□□□ -0.23
SREBF1-205ENST00000395757 ZNF91Q05481 1191 aa13.59□□□□□ -0.23
SREBF1-205ENST00000395757 SYT6Q5T7P8 510 aaPredicted RBP13.59□□□□□ -0.23
SREBF1-205ENST00000395757 CCBE1Q6UXH8 406 aaPredicted RBP13.59□□□□□ -0.23
SREBF1-205ENST00000395757 AMIGO1Q86WK6 493 aa13.59□□□□□ -0.23
SREBF1-205ENST00000395757 OR5T3Q8NGG3 340 aa13.59□□□□□ -0.23
SREBF1-205ENST00000395757 RERGQ96A58 199 aaPredicted RBP13.59□□□□□ -0.23
SREBF1-205ENST00000395757 SLC38A2Q96QD8 506 aa13.59□□□□□ -0.23
SREBF1-205ENST00000395757 HDHD2Q9H0R4 259 aa13.59□□□□□ -0.23
SREBF1-205ENST00000395757 NECTIN3Q9NQS3 549 aa13.59□□□□□ -0.23
SREBF1-205ENST00000395757 TBC1D29Q9UFV1 150 aa13.59□□□□□ -0.23
SREBF1-205ENST00000395757 GLULP15104 373 aa13.58□□□□□ -0.24
SREBF1-205ENST00000395757 ELAVL4P26378 380 aaKnown RBP13.58□□□□□ -0.24
SREBF1-205ENST00000395757 ACADLP28330 430 aa13.58□□□□□ -0.24
SREBF1-205ENST00000395757 DRD3P35462 400 aa13.58□□□□□ -0.24
SREBF1-205ENST00000395757 BSGP35613 385 aa13.58□□□□□ -0.24
SREBF1-205ENST00000395757 STEAP3Q658P3 488 aa13.58□□□□□ -0.24
SREBF1-205ENST00000395757 UNC5DQ6UXZ4 953 aa13.58□□□□□ -0.24
SREBF1-205ENST00000395757 CDS1Q92903 461 aa13.58□□□□□ -0.24
SREBF1-205ENST00000395757 TRIM45Q9H8W5 580 aaPredicted RBP13.58□□□□□ -0.24
SREBF1-205ENST00000395757 CLCA3PQ9Y6N3 262 aa13.58□□□□□ -0.24
SREBF1-205ENST00000395757 TCF20Q9UGU0 1960 aaKnown RBP13.58□□□□□ -0.24
SREBF1-205ENST00000395757 FFAR1O14842 300 aa13.58□□□□□ -0.24
SREBF1-205ENST00000395757 SSX4O60224 188 aa13.58□□□□□ -0.24
SREBF1-205ENST00000395757 EFEMP2O95967 443 aa13.58□□□□□ -0.24
SREBF1-205ENST00000395757 OSMP13725 252 aa13.58□□□□□ -0.24
SREBF1-205ENST00000395757 HIST1H1TP22492 207 aaPredicted RBP13.58□□□□□ -0.24
SREBF1-205ENST00000395757 ACSL1P33121 698 aa13.58□□□□□ -0.24
SREBF1-205ENST00000395757 OPRD1P41143 372 aa13.58□□□□□ -0.24
SREBF1-205ENST00000395757 XCR1P46094 333 aa13.58□□□□□ -0.24
SREBF1-205ENST00000395757 VSX2P58304 361 aaPredicted RBP13.58□□□□□ -0.24
SREBF1-205ENST00000395757 COPZ1P61923 177 aa13.58□□□□□ -0.24
SREBF1-205ENST00000395757 METRNLQ641Q3 311 aa13.58□□□□□ -0.24
SREBF1-205ENST00000395757 BHLHB9Q6PI77 547 aa13.58□□□□□ -0.24
SREBF1-205ENST00000395757 RFPL4BQ6ZWI9 263 aa13.58□□□□□ -0.24
SREBF1-205ENST00000395757 COX18Q8N8Q8 333 aa13.58□□□□□ -0.24
SREBF1-205ENST00000395757 TMIEQ8NEW7 156 aa13.58□□□□□ -0.24
SREBF1-205ENST00000395757 AMDHD1Q96NU7 426 aa13.58□□□□□ -0.24
SREBF1-205ENST00000395757 IER2Q9BTL4 223 aa13.58□□□□□ -0.24
SREBF1-205ENST00000395757 USP36Q9P275 1121 aaKnown RBP13.58□□□□□ -0.24
SREBF1-205ENST00000395757 GTF2A1LQ9UNN4 478 aa13.58□□□□□ -0.24
SREBF1-205ENST00000395757 PLXNA3P51805 1871 aa13.58□□□□□ -0.24
SREBF1-205ENST00000395757 EML2O95834 649 aa13.58□□□□□ -0.24
SREBF1-205ENST00000395757 MMP11P24347 488 aa13.58□□□□□ -0.24
SREBF1-205ENST00000395757 TLX1P31314 330 aaPredicted RBP13.58□□□□□ -0.24
SREBF1-205ENST00000395757 MVDP53602 400 aa13.58□□□□□ -0.24
SREBF1-205ENST00000395757 CDH11P55287 796 aa13.58□□□□□ -0.24
SREBF1-205ENST00000395757 EIF4HQ15056 248 aaKnown RBP13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms