RNA–Protein interactions for RNA: ENST00000392455.7

CCDC50-201, Transcript of coiled-coil domain containing 50, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CCDC50, Length 8,429 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-201ENST00000392455 OXSMQ9NWU1 459 aa14.08□□□□□ -0.15
CCDC50-201ENST00000392455 UNC119BA6NIH7 251 aa14.08□□□□□ -0.16
CCDC50-201ENST00000392455 GAAP10253 952 aa14.08□□□□□ -0.16
CCDC50-201ENST00000392455 PGCP20142 388 aa14.08□□□□□ -0.16
CCDC50-201ENST00000392455 PPT1P50897 306 aa14.08□□□□□ -0.16
CCDC50-201ENST00000392455 IRF9Q00978 393 aa14.08□□□□□ -0.16
CCDC50-201ENST00000392455 DCUN1D4Q92564 292 aa14.08□□□□□ -0.16
CCDC50-201ENST00000392455 ISOC1Q96CN7 298 aa14.08□□□□□ -0.16
CCDC50-201ENST00000392455 MAN2C1Q9NTJ4 1040 aa14.08□□□□□ -0.16
CCDC50-201ENST00000392455 CD300LBA8K4G0 201 aa14.08□□□□□ -0.16
CCDC50-201ENST00000392455 PCDH17O14917 1159 aa14.08□□□□□ -0.16
CCDC50-201ENST00000392455 PRAMEF2O60811 474 aa14.08□□□□□ -0.16
CCDC50-201ENST00000392455 FHP07954 510 aa14.08□□□□□ -0.16
CCDC50-201ENST00000392455 CHRM5P08912 532 aaPredicted RBP14.08□□□□□ -0.16
CCDC50-201ENST00000392455 MSX1P28360 303 aa14.08□□□□□ -0.16
CCDC50-201ENST00000392455 CNN3Q15417 329 aaKnown RBP14.08□□□□□ -0.16
CCDC50-201ENST00000392455 TMEM53Q6P2H8 277 aa14.08□□□□□ -0.16
CCDC50-201ENST00000392455 FAM111BQ6SJ93 734 aa14.08□□□□□ -0.16
CCDC50-201ENST00000392455 KRBOX1C9JBD0 128 aa14.08□□□□□ -0.16
CCDC50-201ENST00000392455 ARVCFO00192 962 aa14.08□□□□□ -0.16
CCDC50-201ENST00000392455 KNG1P01042 644 aa14.08□□□□□ -0.16
CCDC50-201ENST00000392455 SHMT2P34897 504 aa14.08□□□□□ -0.16
CCDC50-201ENST00000392455 ZNF321PQ8N8H1 164 aa14.08□□□□□ -0.16
CCDC50-201ENST00000392455 HINT2Q9BX68 163 aa14.08□□□□□ -0.16
CCDC50-201ENST00000392455 CACFD1Q9UGQ2 172 aa14.08□□□□□ -0.16
CCDC50-201ENST00000392455 CHD2O14647 1828 aaKnown RBP14.08□□□□□ -0.16
CCDC50-201ENST00000392455 CDHR4A6H8M9 788 aa14.08□□□□□ -0.16
CCDC50-201ENST00000392455 TFP02787 698 aa14.08□□□□□ -0.16
CCDC50-201ENST00000392455 LIPJQ5W064 366 aa14.08□□□□□ -0.16
CCDC50-201ENST00000392455 SPARTQ8N0X7 666 aa14.08□□□□□ -0.16
CCDC50-201ENST00000392455 CLEC4CQ8WTT0 213 aa14.08□□□□□ -0.16
CCDC50-201ENST00000392455 SPOCK3Q9BQ16 436 aa14.08□□□□□ -0.16
CCDC50-201ENST00000392455 ISYNA1Q9NPH2 558 aa14.08□□□□□ -0.16
CCDC50-201ENST00000392455 FMN2Q9NZ56 1722 aa14.08□□□□□ -0.16
CCDC50-201ENST00000392455 IFT172Q9UG01 1749 aa14.08□□□□□ -0.16
CCDC50-201ENST00000392455 GCSHP23434 173 aa14.08□□□□□ -0.16
CCDC50-201ENST00000392455 ACBD7Q8N6N7 88 aa14.08□□□□□ -0.16
CCDC50-201ENST00000392455 TRUB1Q8WWH5 349 aaKnown RBP14.08□□□□□ -0.16
CCDC50-201ENST00000392455 PLEK2Q9NYT0 353 aa14.08□□□□□ -0.16
CCDC50-201ENST00000392455 ZNF891A8MT65 544 aaPredicted RBP14.07□□□□□ -0.16
CCDC50-201ENST00000392455 ECI2O75521 394 aa14.07□□□□□ -0.16
CCDC50-201ENST00000392455 JRKO75564 520 aa14.07□□□□□ -0.16
CCDC50-201ENST00000392455 INHAP05111 366 aa14.07□□□□□ -0.16
CCDC50-201ENST00000392455 RAB7AP51149 207 aa14.07□□□□□ -0.16
CCDC50-201ENST00000392455 RAB28P51157 221 aa14.07□□□□□ -0.16
CCDC50-201ENST00000392455 DGKEP52429 567 aa14.07□□□□□ -0.16
CCDC50-201ENST00000392455 EMX2Q04743 252 aa14.07□□□□□ -0.16
CCDC50-201ENST00000392455 CRYZQ08257 329 aaKnown RBP14.07□□□□□ -0.16
CCDC50-201ENST00000392455 TMIGD1Q6UXZ0 262 aa14.07□□□□□ -0.16
CCDC50-201ENST00000392455 ZNF574Q6ZN55 896 aaPredicted RBP14.07□□□□□ -0.16
CCDC50-201ENST00000392455 COX15Q7KZN9 410 aa14.07□□□□□ -0.16
CCDC50-201ENST00000392455 ERMP1Q7Z2K6 904 aa14.07□□□□□ -0.16
CCDC50-201ENST00000392455 KIAA1191Q96A73 305 aa14.07□□□□□ -0.16
CCDC50-201ENST00000392455 PBX4Q9BYU1 374 aa14.07□□□□□ -0.16
CCDC50-201ENST00000392455 A0A1W2PRU2 124 aa14.07□□□□□ -0.16
CCDC50-201ENST00000392455 TTC24A2A3L6 582 aaPredicted RBP14.07□□□□□ -0.16
CCDC50-201ENST00000392455 MMP20O60882 483 aa14.07□□□□□ -0.16
CCDC50-201ENST00000392455 RFPL3O75679 317 aa14.07□□□□□ -0.16
CCDC50-201ENST00000392455 PRSS3P35030 304 aa14.07□□□□□ -0.16
CCDC50-201ENST00000392455 HES5Q5TA89 166 aa14.07□□□□□ -0.16
CCDC50-201ENST00000392455 ESPNLQ6ZVH7 1005 aa14.07□□□□□ -0.16
CCDC50-201ENST00000392455 GCNT2Q8N0V5 402 aa14.07□□□□□ -0.16
CCDC50-201ENST00000392455 SCAMP5Q8TAC9 235 aa14.07□□□□□ -0.16
CCDC50-201ENST00000392455 ZNF541Q9H0D2 1346 aa14.07□□□□□ -0.16
CCDC50-201ENST00000392455 ADGRB2O60241 1585 aa14.07□□□□□ -0.16
CCDC50-201ENST00000392455 SCO1O75880 301 aa14.07□□□□□ -0.16
CCDC50-201ENST00000392455 TOX4O94842 621 aa14.07□□□□□ -0.16
CCDC50-201ENST00000392455 EBLN1P0CF75 366 aa14.07□□□□□ -0.16
CCDC50-201ENST00000392455 STAG3L2P0CL84 134 aa14.07□□□□□ -0.16
CCDC50-201ENST00000392455 DLX2Q07687 328 aaPredicted RBP14.07□□□□□ -0.16
CCDC50-201ENST00000392455 GDPD4Q6W3E5 623 aa14.07□□□□□ -0.16
CCDC50-201ENST00000392455 SUMF1Q8NBK3 374 aa14.07□□□□□ -0.16
CCDC50-201ENST00000392455 FAM156AQ8NDB6 213 aa14.07□□□□□ -0.16
CCDC50-201ENST00000392455 ESAMQ96AP7 390 aa14.07□□□□□ -0.16
CCDC50-201ENST00000392455 LRIG1Q96JA1 1093 aa14.07□□□□□ -0.16
CCDC50-201ENST00000392455 A8MU76 341 aa14.07□□□□□ -0.16
CCDC50-201ENST00000392455 ADAMTS4O75173 837 aa14.07□□□□□ -0.16
CCDC50-201ENST00000392455 CNOT4O95628 575 aaKnown RBP14.07□□□□□ -0.16
CCDC50-201ENST00000392455 RPL7P18124 248 aaKnown RBP14.07□□□□□ -0.16
CCDC50-201ENST00000392455 VIPR1P32241 457 aa14.07□□□□□ -0.16
CCDC50-201ENST00000392455 SLAMF1Q13291 335 aa14.07□□□□□ -0.16
CCDC50-201ENST00000392455 METTL4Q8N3J2 472 aa14.07□□□□□ -0.16
CCDC50-201ENST00000392455 CARS2Q9HA77 564 aaKnown RBP14.07□□□□□ -0.16
CCDC50-201ENST00000392455 CDH20Q9HBT6 801 aa14.07□□□□□ -0.16
CCDC50-201ENST00000392455 A0A1B0GVT2 93 aa14.07□□□□□ -0.16
CCDC50-201ENST00000392455 A6NIZ1 184 aa14.07□□□□□ -0.16
CCDC50-201ENST00000392455 LCMT2O60294 686 aaKnown RBP14.07□□□□□ -0.16
CCDC50-201ENST00000392455 AOC1P19801 751 aa14.07□□□□□ -0.16
CCDC50-201ENST00000392455 RAP1BP61224 184 aa14.07□□□□□ -0.16
CCDC50-201ENST00000392455 RAP1AP62834 184 aa14.07□□□□□ -0.16
CCDC50-201ENST00000392455 EGFL6Q8IUX8 553 aa14.07□□□□□ -0.16
CCDC50-201ENST00000392455 C3orf58Q8NDZ4 430 aa14.07□□□□□ -0.16
CCDC50-201ENST00000392455 OR8J1Q8NGP2 316 aa14.07□□□□□ -0.16
CCDC50-201ENST00000392455 NFKBIDQ8NI38 313 aa14.07□□□□□ -0.16
CCDC50-201ENST00000392455 SLC2A12Q8TD20 617 aa14.07□□□□□ -0.16
CCDC50-201ENST00000392455 HSH2DQ96JZ2 352 aa14.07□□□□□ -0.16
CCDC50-201ENST00000392455 OTOFQ9HC10 1997 aa14.07□□□□□ -0.16
CCDC50-201ENST00000392455 CNTN5O94779 1100 aa14.07□□□□□ -0.16
CCDC50-201ENST00000392455 TGFB1P01137 390 aa14.07□□□□□ -0.16
CCDC50-201ENST00000392455 UGT2B7P16662 529 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms