RNA–Protein interactions for RNA: ENST00000384165.1

RNU6-42P-201, Transcript of RNA, U6 small nuclear 42, pseudogene, humanhuman

BASIC

Gene RNU6-42P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-42P-201ENST00000384165 ZNF8P17098 575 aaPredicted RBP0.72□□□□□ -2.29
RNU6-42P-201ENST00000384165 CHRNB2P17787 502 aa0.72□□□□□ -2.29
RNU6-42P-201ENST00000384165 VCLP18206 1134 aa0.72□□□□□ -2.29
RNU6-42P-201ENST00000384165 GGT1P19440 569 aa0.72□□□□□ -2.29
RNU6-42P-201ENST00000384165 HLA-DPA1P20036 260 aa0.72□□□□□ -2.29
RNU6-42P-201ENST00000384165 IL11P20809 199 aa0.72□□□□□ -2.29
RNU6-42P-201ENST00000384165 PAICSP22234 425 aaKnown RBP0.72□□□□□ -2.29
RNU6-42P-201ENST00000384165 SLC6A2P23975 617 aa0.72□□□□□ -2.29
RNU6-42P-201ENST00000384165 TBXAS1P24557 533 aaPredicted RBP0.72□□□□□ -2.29
RNU6-42P-201ENST00000384165 GDNFP39905 211 aa0.72□□□□□ -2.29
RNU6-42P-201ENST00000384165 NPTX2P47972 431 aa0.72□□□□□ -2.29
RNU6-42P-201ENST00000384165 TFPI2P48307 235 aa0.72□□□□□ -2.29
RNU6-42P-201ENST00000384165 CLCNKAP51800 687 aa0.72□□□□□ -2.29
RNU6-42P-201ENST00000384165 NEK2P51955 445 aa0.72□□□□□ -2.29
RNU6-42P-201ENST00000384165 SUCLG1P53597 346 aaKnown RBP0.72□□□□□ -2.29
RNU6-42P-201ENST00000384165 MANFP55145 182 aaKnown RBP0.72□□□□□ -2.29
RNU6-42P-201ENST00000384165 MAP3K7CLP57077 242 aa0.72□□□□□ -2.29
RNU6-42P-201ENST00000384165 OR4D2P58180 307 aa0.72□□□□□ -2.29
RNU6-42P-201ENST00000384165 SLC26A5P58743 744 aa0.72□□□□□ -2.29
RNU6-42P-201ENST00000384165 SNRPD1P62314 119 aaKnown RBP0.72□□□□□ -2.29
RNU6-42P-201ENST00000384165 RPL23AP62750 156 aaKnown RBP0.72□□□□□ -2.29
RNU6-42P-201ENST00000384165 PRAMEP78395 509 aa0.72□□□□□ -2.29
RNU6-42P-201ENST00000384165 GABPB1Q06547 395 aaPredicted RBP0.72□□□□□ -2.29
RNU6-42P-201ENST00000384165 TGM3Q08188 693 aa0.72□□□□□ -2.29
RNU6-42P-201ENST00000384165 SPOCK1Q08629 439 aa0.72□□□□□ -2.29
RNU6-42P-201ENST00000384165 ASPHQ12797 758 aa0.72□□□□□ -2.29
RNU6-42P-201ENST00000384165 COX10Q12887 443 aa0.72□□□□□ -2.29
RNU6-42P-201ENST00000384165 SRSF9Q13242 221 aaKnown RBP eCLIP0.72□□□□□ -2.29
RNU6-42P-201ENST00000384165 PTGR1Q14914 329 aa0.72□□□□□ -2.29
RNU6-42P-201ENST00000384165 BRD3Q15059 726 aa0.72□□□□□ -2.29
RNU6-42P-201ENST00000384165 SS18Q15532 418 aa0.72□□□□□ -2.29
RNU6-42P-201ENST00000384165 ADIPOQQ15848 244 aa0.72□□□□□ -2.29
RNU6-42P-201ENST00000384165 CALCRLQ16602 461 aa0.72□□□□□ -2.29
RNU6-42P-201ENST00000384165 UGP2Q16851 508 aa0.72□□□□□ -2.29
RNU6-42P-201ENST00000384165 KNOP1Q1ED39 458 aaKnown RBP0.72□□□□□ -2.29
RNU6-42P-201ENST00000384165 TMEM44Q2T9K0 475 aa0.72□□□□□ -2.29
RNU6-42P-201ENST00000384165 ALDH1L2Q3SY69 923 aa0.72□□□□□ -2.29
RNU6-42P-201ENST00000384165 MMEL1Q495T6 779 aa0.72□□□□□ -2.29
RNU6-42P-201ENST00000384165 FASTKD1Q53R41 847 aaKnown RBP0.72□□□□□ -2.29
RNU6-42P-201ENST00000384165 SFT2D3Q587I9 215 aa0.72□□□□□ -2.29
RNU6-42P-201ENST00000384165 MS4A13Q5J8X5 152 aa0.72□□□□□ -2.29
RNU6-42P-201ENST00000384165 TCTE1Q5JU00 501 aa0.72□□□□□ -2.29
RNU6-42P-201ENST00000384165 DEPDC1Q5TB30 811 aa0.72□□□□□ -2.29
RNU6-42P-201ENST00000384165 ZDHHC20Q5W0Z9 365 aa0.72□□□□□ -2.29
RNU6-42P-201ENST00000384165 C18orf63Q68DL7 685 aa0.72□□□□□ -2.29
RNU6-42P-201ENST00000384165 OGFOD2Q6N063 350 aa0.72□□□□□ -2.29
RNU6-42P-201ENST00000384165 LRFN4Q6PJG9 635 aa0.72□□□□□ -2.29
RNU6-42P-201ENST00000384165 REG3GQ6UW15 175 aa0.72□□□□□ -2.29
RNU6-42P-201ENST00000384165 C6orf89Q6UWU4 347 aa0.72□□□□□ -2.29
RNU6-42P-201ENST00000384165 COX6B2Q6YFQ2 88 aa0.72□□□□□ -2.29
RNU6-42P-201ENST00000384165 OR2W3Q7Z3T1 314 aa0.72□□□□□ -2.29
RNU6-42P-201ENST00000384165 SPATA21Q7Z572 469 aa0.72□□□□□ -2.29
RNU6-42P-201ENST00000384165 ANKRD37Q7Z713 158 aa0.72□□□□□ -2.29
RNU6-42P-201ENST00000384165 SCD5Q86SK9 330 aa0.72□□□□□ -2.29
RNU6-42P-201ENST00000384165 TPH2Q8IWU9 490 aa0.72□□□□□ -2.29
RNU6-42P-201ENST00000384165 C4orf19Q8IY42 314 aa0.72□□□□□ -2.29
RNU6-42P-201ENST00000384165 ZBED8Q8IZ13 594 aa0.72□□□□□ -2.29
RNU6-42P-201ENST00000384165 ADGRF3Q8IZF5 1079 aa0.72□□□□□ -2.29
RNU6-42P-201ENST00000384165 CSGALNACT2Q8N6G5 542 aa0.72□□□□□ -2.29
RNU6-42P-201ENST00000384165 L3MBTL4Q8NA19 623 aa0.72□□□□□ -2.29
RNU6-42P-201ENST00000384165 TEX45Q8NA69 505 aa0.72□□□□□ -2.29
RNU6-42P-201ENST00000384165 POC5Q8NA72 575 aa0.72□□□□□ -2.29
RNU6-42P-201ENST00000384165 GOLM1Q8NBJ4 401 aa0.72□□□□□ -2.29
RNU6-42P-201ENST00000384165 PDPRQ8NCN5 879 aa0.72□□□□□ -2.29
RNU6-42P-201ENST00000384165 OR6K2Q8NGY2 324 aa0.72□□□□□ -2.29
RNU6-42P-201ENST00000384165 OR8U1Q8NH10 309 aa0.72□□□□□ -2.29
RNU6-42P-201ENST00000384165 PUM2Q8TB72 1066 aaKnown RBP eCLIP0.72□□□□□ -2.29
RNU6-42P-201ENST00000384165 NPRL2Q8WTW4 380 aa0.72□□□□□ -2.29
RNU6-42P-201ENST00000384165 CKAP2Q8WWK9 683 aa0.72□□□□□ -2.29
RNU6-42P-201ENST00000384165 CPA5Q8WXQ8 436 aa0.72□□□□□ -2.29
RNU6-42P-201ENST00000384165 TAAR8Q969N4 342 aa0.72□□□□□ -2.29
RNU6-42P-201ENST00000384165 SEH1LQ96EE3 360 aa0.72□□□□□ -2.29
RNU6-42P-201ENST00000384165 TMX3Q96JJ7 454 aa0.72□□□□□ -2.29
RNU6-42P-201ENST00000384165 PGBD1Q96JS3 809 aa0.72□□□□□ -2.29
RNU6-42P-201ENST00000384165 PDLIM2Q96JY6 352 aa0.72□□□□□ -2.29
RNU6-42P-201ENST00000384165 LRGUKQ96M69 825 aa0.72□□□□□ -2.29
RNU6-42P-201ENST00000384165 ZNF641Q96N77 438 aaPredicted RBP0.72□□□□□ -2.29
RNU6-42P-201ENST00000384165 GPR78Q96P69 363 aa0.72□□□□□ -2.29
RNU6-42P-201ENST00000384165 OR2A14Q96R47 310 aa0.72□□□□□ -2.29
RNU6-42P-201ENST00000384165 OR4C12Q96R67 309 aa0.72□□□□□ -2.29
RNU6-42P-201ENST00000384165 HBEGFQ99075 208 aa0.72□□□□□ -2.29
RNU6-42P-201ENST00000384165 SSX3Q99909 188 aa0.72□□□□□ -2.29
RNU6-42P-201ENST00000384165 RETNLBQ9BQ08 111 aa0.72□□□□□ -2.29
RNU6-42P-201ENST00000384165 NTPCRQ9BSD7 190 aaKnown RBP0.72□□□□□ -2.29
RNU6-42P-201ENST00000384165 PAXXQ9BUH6 204 aa0.72□□□□□ -2.29
RNU6-42P-201ENST00000384165 CDCA4Q9BXL8 241 aa0.72□□□□□ -2.29
RNU6-42P-201ENST00000384165 OR11A1Q9GZK7 315 aa0.72□□□□□ -2.29
RNU6-42P-201ENST00000384165 TGIF2Q9GZN2 237 aa0.72□□□□□ -2.29
RNU6-42P-201ENST00000384165 FAM192AQ9GZU8 254 aa0.72□□□□□ -2.29
RNU6-42P-201ENST00000384165 CCDC113Q9H0I3 377 aa0.72□□□□□ -2.29
RNU6-42P-201ENST00000384165 SRMSQ9H3Y6 488 aa0.72□□□□□ -2.29
RNU6-42P-201ENST00000384165 SERHL2Q9H4I8 314 aa0.72□□□□□ -2.29
RNU6-42P-201ENST00000384165 ZSWIM4Q9H7M6 989 aa0.72□□□□□ -2.29
RNU6-42P-201ENST00000384165 SYNPO2LQ9H987 977 aa0.72□□□□□ -2.29
RNU6-42P-201ENST00000384165 PLEKHA3Q9HB20 300 aa0.72□□□□□ -2.29
RNU6-42P-201ENST00000384165 APOBEC3GQ9HC16 384 aaKnown RBP0.72□□□□□ -2.29
RNU6-42P-201ENST00000384165 SSU72Q9NP77 194 aaKnown RBP0.72□□□□□ -2.29
RNU6-42P-201ENST00000384165 ISYNA1Q9NPH2 558 aa0.72□□□□□ -2.29
RNU6-42P-201ENST00000384165 PAPOLBQ9NRJ5 636 aaKnown RBP0.72□□□□□ -2.29
RNU6-42P-201ENST00000384165 CA10Q9NS85 328 aa0.72□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms