RNA–Protein interactions for RNA: ENST00000373433.8

RPRD1B-201, Transcript of regulation of nuclear pre-mRNA domain containing 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPRD1B, Length 3,874 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1B-201ENST00000373433 LPAL2Q16609 132 aa10.58□□□□□ -0.72
RPRD1B-201ENST00000373433 CRTC2Q53ET0 693 aaPredicted RBP10.58□□□□□ -0.72
RPRD1B-201ENST00000373433 ALKBH2Q6NS38 261 aa10.58□□□□□ -0.72
RPRD1B-201ENST00000373433 DTD2Q96FN9 168 aa10.58□□□□□ -0.72
RPRD1B-201ENST00000373433 C12orf66Q96MD2 445 aa10.58□□□□□ -0.72
RPRD1B-201ENST00000373433 NELL2Q99435 816 aa10.58□□□□□ -0.72
RPRD1B-201ENST00000373433 CLEC4MQ9H2X3 399 aaPredicted RBP10.58□□□□□ -0.72
RPRD1B-201ENST00000373433 CASKO14936 926 aa10.58□□□□□ -0.72
RPRD1B-201ENST00000373433 HBQ1P09105 142 aa10.58□□□□□ -0.72
RPRD1B-201ENST00000373433 BTN1A1Q13410 526 aa10.58□□□□□ -0.72
RPRD1B-201ENST00000373433 ZMYND11Q15326 602 aa10.58□□□□□ -0.72
RPRD1B-201ENST00000373433 IFI44LQ53G44 452 aa10.58□□□□□ -0.72
RPRD1B-201ENST00000373433 ASB18Q6ZVZ8 466 aa10.58□□□□□ -0.72
RPRD1B-201ENST00000373433 TAF8Q7Z7C8 310 aa10.58□□□□□ -0.72
RPRD1B-201ENST00000373433 NRSN1Q8IZ57 195 aa10.58□□□□□ -0.72
RPRD1B-201ENST00000373433 TMEM145Q8NBT3 493 aa10.58□□□□□ -0.72
RPRD1B-201ENST00000373433 ZCCHC10Q8TBK6 192 aa10.58□□□□□ -0.72
RPRD1B-201ENST00000373433 RAD51AP1Q96B01 352 aa10.58□□□□□ -0.72
RPRD1B-201ENST00000373433 TM9SF2Q99805 663 aa10.58□□□□□ -0.72
RPRD1B-201ENST00000373433 GPR174Q9BXC1 333 aa10.58□□□□□ -0.72
RPRD1B-201ENST00000373433 DNAJC11Q9NVH1 559 aa10.58□□□□□ -0.72
RPRD1B-201ENST00000373433 TRPS1Q9UHF7 1281 aa10.58□□□□□ -0.72
RPRD1B-201ENST00000373433 GTF2A1LQ9UNN4 478 aa10.58□□□□□ -0.72
RPRD1B-201ENST00000373433 SLC35F4A4IF30 521 aa10.57□□□□□ -0.72
RPRD1B-201ENST00000373433 FAM170BA6NMN3 283 aa10.57□□□□□ -0.72
RPRD1B-201ENST00000373433 NUPL2O15504 423 aaKnown RBP10.57□□□□□ -0.72
RPRD1B-201ENST00000373433 HPGDSO60760 199 aa10.57□□□□□ -0.72
RPRD1B-201ENST00000373433 CTSLP07711 333 aa10.57□□□□□ -0.72
RPRD1B-201ENST00000373433 CHMP24386 653 aa10.57□□□□□ -0.72
RPRD1B-201ENST00000373433 MMP12P39900 470 aa10.57□□□□□ -0.72
RPRD1B-201ENST00000373433 RAB14P61106 215 aa10.57□□□□□ -0.72
RPRD1B-201ENST00000373433 MESP2Q0VG99 397 aa10.57□□□□□ -0.72
RPRD1B-201ENST00000373433 BCL2L15Q5TBC7 163 aa10.57□□□□□ -0.72
RPRD1B-201ENST00000373433 GARNL3Q5VVW2 1013 aa10.57□□□□□ -0.72
RPRD1B-201ENST00000373433 ARSKQ6UWY0 536 aa10.57□□□□□ -0.72
RPRD1B-201ENST00000373433 GDPGP1Q6ZNW5 385 aa10.57□□□□□ -0.72
RPRD1B-201ENST00000373433 ETFBKMTQ8IXQ9 262 aa10.57□□□□□ -0.72
RPRD1B-201ENST00000373433 C11orf65Q8NCR3 313 aa10.57□□□□□ -0.72
RPRD1B-201ENST00000373433 LKAAEAR1Q8TD35 194 aa10.57□□□□□ -0.72
RPRD1B-201ENST00000373433 DOK4Q8TEW6 326 aa10.57□□□□□ -0.72
RPRD1B-201ENST00000373433 TADA1Q96BN2 335 aa10.57□□□□□ -0.72
RPRD1B-201ENST00000373433 KCTD7Q96MP8 289 aa10.57□□□□□ -0.72
RPRD1B-201ENST00000373433 MND1Q9BWT6 205 aa10.57□□□□□ -0.72
RPRD1B-201ENST00000373433 CDCP1Q9H5V8 836 aa10.57□□□□□ -0.72
RPRD1B-201ENST00000373433 CTPS2Q9NRF8 586 aa10.57□□□□□ -0.72
RPRD1B-201ENST00000373433 CACNA1IQ9P0X4 2223 aa10.57□□□□□ -0.72
RPRD1B-201ENST00000373433 PLEKHB1Q9UF11 243 aaPredicted RBP10.57□□□□□ -0.72
RPRD1B-201ENST00000373433 PRSS21Q9Y6M0 314 aa10.57□□□□□ -0.72
RPRD1B-201ENST00000373433 MKI67P46013 3256 aaKnown RBP10.57□□□□□ -0.72
RPRD1B-201ENST00000373433 TRAV6A0A075B6T7 132 aa10.57□□□□□ -0.72
RPRD1B-201ENST00000373433 TRIM77I1YAP6 450 aa10.57□□□□□ -0.72
RPRD1B-201ENST00000373433 TLR4O00206 839 aa10.57□□□□□ -0.72
RPRD1B-201ENST00000373433 PROM1O43490 865 aa10.57□□□□□ -0.72
RPRD1B-201ENST00000373433 PCDH7O60245 1069 aa10.57□□□□□ -0.72
RPRD1B-201ENST00000373433 GADD45GO95257 159 aa10.57□□□□□ -0.72
RPRD1B-201ENST00000373433 LAMP1P11279 417 aa10.57□□□□□ -0.72
RPRD1B-201ENST00000373433 ICAM2P13598 275 aa10.57□□□□□ -0.72
RPRD1B-201ENST00000373433 BMP8BP34820 402 aa10.57□□□□□ -0.72
RPRD1B-201ENST00000373433 ZNF81P51508 661 aa10.57□□□□□ -0.72
RPRD1B-201ENST00000373433 CRYBA2P53672 197 aa10.57□□□□□ -0.72
RPRD1B-201ENST00000373433 RHAGQ02094 409 aa10.57□□□□□ -0.72
RPRD1B-201ENST00000373433 ARTNQ5T4W7 220 aa10.57□□□□□ -0.72
RPRD1B-201ENST00000373433 NOXRED1Q6NXP6 359 aa10.57□□□□□ -0.72
RPRD1B-201ENST00000373433 POMZP3Q6PJE2 187 aa10.57□□□□□ -0.72
RPRD1B-201ENST00000373433 FAM9CQ8IZT9 166 aa10.57□□□□□ -0.72
RPRD1B-201ENST00000373433 NAGSQ8N159 534 aa10.57□□□□□ -0.72
RPRD1B-201ENST00000373433 SMRP1Q8NCR6 262 aa10.57□□□□□ -0.72
RPRD1B-201ENST00000373433 OR52P1PQ8NH57 321 aa10.57□□□□□ -0.72
RPRD1B-201ENST00000373433 SNX11Q9Y5W9 270 aa10.57□□□□□ -0.72
RPRD1B-201ENST00000373433 ACACAQ13085 2346 aa10.57□□□□□ -0.72
RPRD1B-201ENST00000373433 CCDC88CQ9P219 2028 aa10.57□□□□□ -0.72
RPRD1B-201ENST00000373433 SH3D21A4FU49 640 aa10.57□□□□□ -0.72
RPRD1B-201ENST00000373433 H7C0S8 307 aa10.57□□□□□ -0.72
RPRD1B-201ENST00000373433 CBSLP0DN79 551 aa10.57□□□□□ -0.72
RPRD1B-201ENST00000373433 CBSP35520 551 aa10.57□□□□□ -0.72
RPRD1B-201ENST00000373433 METAP1P53582 386 aa10.57□□□□□ -0.72
RPRD1B-201ENST00000373433 C1orf61Q13536 156 aa10.57□□□□□ -0.72
RPRD1B-201ENST00000373433 ZBTB44Q8NCP5 570 aa10.57□□□□□ -0.72
RPRD1B-201ENST00000373433 RLN3Q8WXF3 142 aa10.57□□□□□ -0.72
RPRD1B-201ENST00000373433 AP3S1Q92572 193 aa10.57□□□□□ -0.72
RPRD1B-201ENST00000373433 TFGQ92734 400 aaPredicted RBP10.57□□□□□ -0.72
RPRD1B-201ENST00000373433 USP7Q93009 1102 aa10.57□□□□□ -0.72
RPRD1B-201ENST00000373433 TESCQ96BS2 214 aa10.57□□□□□ -0.72
RPRD1B-201ENST00000373433 ABCG4Q9H172 646 aa10.57□□□□□ -0.72
RPRD1B-201ENST00000373433 RDH8Q9NYR8 311 aa10.57□□□□□ -0.72
RPRD1B-201ENST00000373433 PADI2Q9Y2J8 665 aa10.57□□□□□ -0.72
RPRD1B-201ENST00000373433 GBF1Q92538 1859 aa10.57□□□□□ -0.72
RPRD1B-201ENST00000373433 LINC00862A6NCI5 91 aa10.56□□□□□ -0.72
RPRD1B-201ENST00000373433 IGFBP1P08833 259 aaPredicted RBP10.56□□□□□ -0.72
RPRD1B-201ENST00000373433 AVPR1BP47901 424 aa10.56□□□□□ -0.72
RPRD1B-201ENST00000373433 CRISP1P54107 249 aa10.56□□□□□ -0.72
RPRD1B-201ENST00000373433 CLDN20P56880 219 aa10.56□□□□□ -0.72
RPRD1B-201ENST00000373433 SELENOWP63302 87 aa10.56□□□□□ -0.72
RPRD1B-201ENST00000373433 MRPS21P82921 87 aaKnown RBP10.56□□□□□ -0.72
RPRD1B-201ENST00000373433 MFSD13AQ14CX5 517 aa10.56□□□□□ -0.72
RPRD1B-201ENST00000373433 NCF4Q15080 339 aa10.56□□□□□ -0.72
RPRD1B-201ENST00000373433 TOMM20Q15388 145 aa10.56□□□□□ -0.72
RPRD1B-201ENST00000373433 UGT8Q16880 541 aa10.56□□□□□ -0.72
RPRD1B-201ENST00000373433 MINDY4Q4G0A6 757 aa10.56□□□□□ -0.72
RPRD1B-201ENST00000373433 CASP12Q6UXS9 341 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms