RNA–Protein interactions for RNA: ENST00000372459.6

CTSA-203, Transcript of cathepsin A, humanhuman

TSL 1 (best) BASIC

Gene CTSA, Length 1,972 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-203ENST00000372459 ZNF285Q96NJ3 590 aa23.38■■□□□ 1.33
CTSA-203ENST00000372459 CD180Q99467 661 aa23.38■■□□□ 1.33
CTSA-203ENST00000372459 TUBA1CQ9BQE3 449 aa23.38■■□□□ 1.33
CTSA-203ENST00000372459 WFDC6Q9BQY6 131 aa23.38■■□□□ 1.33
CTSA-203ENST00000372459 CHRNA10Q9GZZ6 450 aa23.38■■□□□ 1.33
CTSA-203ENST00000372459 TRIM45Q9H8W5 580 aaPredicted RBP23.38■■□□□ 1.33
CTSA-203ENST00000372459 CXorf21Q9HAI6 301 aa23.38■■□□□ 1.33
CTSA-203ENST00000372459 ENOPH1Q9UHY7 261 aa23.38■■□□□ 1.33
CTSA-203ENST00000372459 TP53BP1Q12888 1972 aaPredicted RBP23.38■■□□□ 1.33
CTSA-203ENST00000372459 ABCB7O75027 752 aa23.38■■□□□ 1.33
CTSA-203ENST00000372459 CBLP22681 906 aa23.38■■□□□ 1.33
CTSA-203ENST00000372459 GABRA4P48169 554 aa23.38■■□□□ 1.33
CTSA-203ENST00000372459 MAPK10P53779 464 aa23.38■■□□□ 1.33
CTSA-203ENST00000372459 FAM53BQ14153 422 aa23.38■■□□□ 1.33
CTSA-203ENST00000372459 PRICKLE4Q2TBC4 344 aa23.38■■□□□ 1.33
CTSA-203ENST00000372459 ZNF311Q5JNZ3 666 aa23.38■■□□□ 1.33
CTSA-203ENST00000372459 FGD3Q5JSP0 725 aa23.38■■□□□ 1.33
CTSA-203ENST00000372459 MAMSTRQ6ZN01 415 aa23.38■■□□□ 1.33
CTSA-203ENST00000372459 HMGN2P46Q86SG4 172 aa23.38■■□□□ 1.33
CTSA-203ENST00000372459 COMTD1Q86VU5 262 aa23.38■■□□□ 1.33
CTSA-203ENST00000372459 NINQ8N4C6 2090 aa23.38■■□□□ 1.33
CTSA-203ENST00000372459 BPIFB6Q8NFQ5 453 aa23.38■■□□□ 1.33
CTSA-203ENST00000372459 CDS1Q92903 461 aa23.38■■□□□ 1.33
CTSA-203ENST00000372459 AHCYL2Q96HN2 611 aaKnown RBP23.38■■□□□ 1.33
CTSA-203ENST00000372459 POLR1BQ9H9Y6 1135 aa23.38■■□□□ 1.33
CTSA-203ENST00000372459 IRAK4Q9NWZ3 460 aa23.38■■□□□ 1.33
CTSA-203ENST00000372459 MUTYHQ9UIF7 546 aa23.38■■□□□ 1.33
CTSA-203ENST00000372459 CSNK1G3Q9Y6M4 447 aa23.38■■□□□ 1.33
CTSA-203ENST00000372459 SCN2AQ99250 2005 aa23.37■■□□□ 1.33
CTSA-203ENST00000372459 IGHV5-51A0A0C4DH38 117 aa23.37■■□□□ 1.33
CTSA-203ENST00000372459 SYT5O00445 386 aa23.37■■□□□ 1.33
CTSA-203ENST00000372459 OXSR1O95747 527 aaPredicted RBP23.37■■□□□ 1.33
CTSA-203ENST00000372459 CXCR4P61073 352 aa23.37■■□□□ 1.33
CTSA-203ENST00000372459 FOXD4Q12950 439 aaPredicted RBP23.37■■□□□ 1.33
CTSA-203ENST00000372459 DCST1Q5T197 706 aa23.37■■□□□ 1.33
CTSA-203ENST00000372459 GARNL3Q5VVW2 1013 aa23.37■■□□□ 1.33
CTSA-203ENST00000372459 DRAXINQ8NBI3 349 aaPredicted RBP23.37■■□□□ 1.33
CTSA-203ENST00000372459 AQP11Q8NBQ7 271 aa23.37■■□□□ 1.33
CTSA-203ENST00000372459 SIMC1Q8NDZ2 872 aa23.37■■□□□ 1.33
CTSA-203ENST00000372459 QRSL1Q9H0R6 528 aaKnown RBP23.37■■□□□ 1.33
CTSA-203ENST00000372459 TRBV4-1A0A0J9YWV2 114 aa23.36■■□□□ 1.33
CTSA-203ENST00000372459 FOXS1O43638 330 aa23.36■■□□□ 1.33
CTSA-203ENST00000372459 UGT2B17O75795 530 aa23.36■■□□□ 1.33
CTSA-203ENST00000372459 CPNE6O95741 557 aa23.36■■□□□ 1.33
CTSA-203ENST00000372459 EPPINO95925 133 aa23.36■■□□□ 1.33
CTSA-203ENST00000372459 RNH1P13489 461 aaKnown RBP23.36■■□□□ 1.33
CTSA-203ENST00000372459 ELAVL4P26378 380 aaKnown RBP23.36■■□□□ 1.33
CTSA-203ENST00000372459 PDX1P52945 283 aa23.36■■□□□ 1.33
CTSA-203ENST00000372459 PMS2P3Q13401 168 aa23.36■■□□□ 1.33
CTSA-203ENST00000372459 RAB39AQ14964 217 aa23.36■■□□□ 1.33
CTSA-203ENST00000372459 MAD2L1BPQ15013 274 aaPredicted RBP23.36■■□□□ 1.33
CTSA-203ENST00000372459 TCTE1Q5JU00 501 aa23.36■■□□□ 1.33
CTSA-203ENST00000372459 MLIPQ5VWP3 458 aa23.36■■□□□ 1.33
CTSA-203ENST00000372459 NKAIN2Q5VXU1 208 aa23.36■■□□□ 1.33
CTSA-203ENST00000372459 PARP8Q8N3A8 854 aa23.36■■□□□ 1.33
CTSA-203ENST00000372459 ADAP2Q9NPF8 381 aa23.36■■□□□ 1.33
CTSA-203ENST00000372459 MAT2BQ9NZL9 334 aa23.36■■□□□ 1.33
CTSA-203ENST00000372459 SLC13A4Q9UKG4 626 aa23.36■■□□□ 1.33
CTSA-203ENST00000372459 A4GNTQ9UNA3 340 aa23.36■■□□□ 1.33
CTSA-203ENST00000372459 PCDHGA6Q9Y5G7 932 aa23.36■■□□□ 1.33
CTSA-203ENST00000372459 CCDC163A0A0D9SF12 145 aa23.36■■□□□ 1.33
CTSA-203ENST00000372459 FAAHO00519 579 aa23.36■■□□□ 1.33
CTSA-203ENST00000372459 NUDT21O43809 227 aaKnown RBP23.36■■□□□ 1.33
CTSA-203ENST00000372459 MED26O95402 600 aa23.36■■□□□ 1.33
CTSA-203ENST00000372459 NSA2O95478 260 aaKnown RBP23.36■■□□□ 1.33
CTSA-203ENST00000372459 ZBTB11O95625 1053 aaPredicted RBP23.36■■□□□ 1.33
CTSA-203ENST00000372459 SLC35E2P0CK97 266 aa23.36■■□□□ 1.33
CTSA-203ENST00000372459 ACP2P11117 423 aa23.36■■□□□ 1.33
CTSA-203ENST00000372459 DUSP5Q16690 384 aa23.36■■□□□ 1.33
CTSA-203ENST00000372459 ARHGAP11BQ3KRB8 267 aa23.36■■□□□ 1.33
CTSA-203ENST00000372459 ZNF770Q6IQ21 691 aaPredicted RBP23.36■■□□□ 1.33
CTSA-203ENST00000372459 ZCCHC12Q6PEW1 402 aa23.36■■□□□ 1.33
CTSA-203ENST00000372459 OR6T1Q8NGN1 323 aa23.36■■□□□ 1.33
CTSA-203ENST00000372459 ADAMTS18Q8TE60 1221 aa23.36■■□□□ 1.33
CTSA-203ENST00000372459 PIGUQ9H490 435 aa23.36■■□□□ 1.33
CTSA-203ENST00000372459 TMEM9Q9P0T7 183 aa23.36■■□□□ 1.33
CTSA-203ENST00000372459 HCN3Q9P1Z3 774 aa23.36■■□□□ 1.33
CTSA-203ENST00000372459 CDC14AQ9UNH5 594 aa23.36■■□□□ 1.33
CTSA-203ENST00000372459 MRPS33Q9Y291 106 aaKnown RBP23.36■■□□□ 1.33
CTSA-203ENST00000372459 HYKKA2RU49 373 aa23.35■■□□□ 1.33
CTSA-203ENST00000372459 BLACEA4D250 179 aa23.35■■□□□ 1.33
CTSA-203ENST00000372459 POU2F1P14859 743 aa23.35■■□□□ 1.33
CTSA-203ENST00000372459 HOXA6P31267 233 aa23.35■■□□□ 1.33
CTSA-203ENST00000372459 GGT2P36268 569 aa23.35■■□□□ 1.33
CTSA-203ENST00000372459 BNIP3Q12983 259 aa23.35■■□□□ 1.33
CTSA-203ENST00000372459 TSSK4Q6SA08 328 aa23.35■■□□□ 1.33
CTSA-203ENST00000372459 B3GNT8Q7Z7M8 397 aa23.35■■□□□ 1.33
CTSA-203ENST00000372459 CCDC71Q8IV32 467 aaPredicted RBP23.35■■□□□ 1.33
CTSA-203ENST00000372459 CDRT4Q8N9R6 151 aa23.35■■□□□ 1.33
CTSA-203ENST00000372459 GTPBP3Q969Y2 492 aaKnown RBP23.35■■□□□ 1.33
CTSA-203ENST00000372459 KLHL3Q9UH77 587 aa23.35■■□□□ 1.33
CTSA-203ENST00000372459 TRIM64BA6NI03 449 aa23.34■■□□□ 1.33
CTSA-203ENST00000372459 GASTP01350 101 aa23.34■■□□□ 1.33
CTSA-203ENST00000372459 ALOX5P09917 674 aa23.34■■□□□ 1.33
CTSA-203ENST00000372459 PRKAR1BP31321 381 aa23.34■■□□□ 1.33
CTSA-203ENST00000372459 PIN1Q13526 163 aaPredicted RBP23.34■■□□□ 1.33
CTSA-203ENST00000372459 PROX2Q3B8N5 592 aa23.34■■□□□ 1.33
CTSA-203ENST00000372459 FRRS1Q6ZNA5 592 aa23.34■■□□□ 1.33
CTSA-203ENST00000372459 CROCCP3Q8IVE0 287 aa23.34■■□□□ 1.33
CTSA-203ENST00000372459 SLC25A45Q8N413 288 aa23.34■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms