RNA–Protein interactions for RNA: ENST00000371429.3

NDC1-201, Transcript of NDC1 transmembrane nucleoporin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDC1, Length 5,134 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDC1-201ENST00000371429 ECH1Q13011 328 aa13.95□□□□□ -0.18
NDC1-201ENST00000371429 MALLQ13021 153 aa13.95□□□□□ -0.18
NDC1-201ENST00000371429 EFR3AQ14156 821 aa13.95□□□□□ -0.18
NDC1-201ENST00000371429 MBTPS1Q14703 1052 aa13.95□□□□□ -0.18
NDC1-201ENST00000371429 GTDC1Q4AE62 458 aa13.95□□□□□ -0.18
NDC1-201ENST00000371429 RFLNAQ6ZTI6 216 aa13.95□□□□□ -0.18
NDC1-201ENST00000371429 DGLUCYQ7Z3D6 616 aa13.95□□□□□ -0.18
NDC1-201ENST00000371429 OR4K5Q8NGD3 323 aa13.95□□□□□ -0.18
NDC1-201ENST00000371429 TBC1D20Q96BZ9 403 aa13.95□□□□□ -0.18
NDC1-201ENST00000371429 RLN2P04090 185 aa13.94□□□□□ -0.18
NDC1-201ENST00000371429 HMGN2P05204 90 aaKnown RBP13.94□□□□□ -0.18
NDC1-201ENST00000371429 CD27P26842 260 aa13.94□□□□□ -0.18
NDC1-201ENST00000371429 ST3GAL4Q11206 333 aa13.94□□□□□ -0.18
NDC1-201ENST00000371429 CTSL3PQ5NE16 218 aa13.94□□□□□ -0.18
NDC1-201ENST00000371429 ENPP6Q6UWR7 440 aa13.94□□□□□ -0.18
NDC1-201ENST00000371429 VTCN1Q7Z7D3 282 aa13.94□□□□□ -0.18
NDC1-201ENST00000371429 UEVLDQ8IX04 471 aa13.94□□□□□ -0.18
NDC1-201ENST00000371429 ARL14Q8N4G2 192 aa13.94□□□□□ -0.18
NDC1-201ENST00000371429 SLC44A3Q8N4M1 653 aa13.94□□□□□ -0.18
NDC1-201ENST00000371429 ZNF548Q8NEK5 533 aaPredicted RBP13.94□□□□□ -0.18
NDC1-201ENST00000371429 CEP76Q8TAP6 659 aa13.94□□□□□ -0.18
NDC1-201ENST00000371429 FRMD6Q96NE9 622 aa13.94□□□□□ -0.18
NDC1-201ENST00000371429 SDR39U1Q9NRG7 319 aaPredicted RBP13.94□□□□□ -0.18
NDC1-201ENST00000371429 WASF3Q9UPY6 502 aa13.94□□□□□ -0.18
NDC1-201ENST00000371429 H0YGG7 62 aa13.94□□□□□ -0.18
NDC1-201ENST00000371429 HTRA2O43464 458 aaPredicted RBP13.94□□□□□ -0.18
NDC1-201ENST00000371429 GLP1RP43220 463 aa13.94□□□□□ -0.18
NDC1-201ENST00000371429 ARF3P61204 181 aaPredicted RBP13.94□□□□□ -0.18
NDC1-201ENST00000371429 ZNF77Q15935 545 aa13.94□□□□□ -0.18
NDC1-201ENST00000371429 SCGB2B2Q4G0G5 96 aa13.94□□□□□ -0.18
NDC1-201ENST00000371429 GLT8D1Q68CQ7 371 aa13.94□□□□□ -0.18
NDC1-201ENST00000371429 ASB18Q6ZVZ8 466 aa13.94□□□□□ -0.18
NDC1-201ENST00000371429 UBE2Q1Q7Z7E8 422 aa13.94□□□□□ -0.18
NDC1-201ENST00000371429 NT5C3BQ969T7 300 aa13.94□□□□□ -0.18
NDC1-201ENST00000371429 MBD2Q9UBB5 411 aa13.94□□□□□ -0.18
NDC1-201ENST00000371429 NKX1-2Q9UD57 310 aaPredicted RBP13.94□□□□□ -0.18
NDC1-201ENST00000371429 FBXO9Q9UK97 447 aaPredicted RBP13.94□□□□□ -0.18
NDC1-201ENST00000371429 FLRT2O43155 660 aa13.94□□□□□ -0.18
NDC1-201ENST00000371429 ATE1O95260 518 aa13.94□□□□□ -0.18
NDC1-201ENST00000371429 TPMTP51580 245 aa13.94□□□□□ -0.18
NDC1-201ENST00000371429 TLE3Q04726 772 aa13.94□□□□□ -0.18
NDC1-201ENST00000371429 CBFBQ13951 182 aa13.94□□□□□ -0.18
NDC1-201ENST00000371429 ZER1Q7Z7L7 766 aa13.94□□□□□ -0.18
NDC1-201ENST00000371429 ZNF565Q8N9K5 539 aa13.94□□□□□ -0.18
NDC1-201ENST00000371429 OR2T4Q8NH00 348 aa13.94□□□□□ -0.18
NDC1-201ENST00000371429 NINJ1Q92982 152 aa13.94□□□□□ -0.18
NDC1-201ENST00000371429 SLC6A18Q96N87 628 aa13.94□□□□□ -0.18
NDC1-201ENST00000371429 SCGB3A2Q96PL1 93 aa13.94□□□□□ -0.18
NDC1-201ENST00000371429 BARD1Q99728 777 aaKnown RBP13.94□□□□□ -0.18
NDC1-201ENST00000371429 INPP5KQ9BT40 448 aa13.94□□□□□ -0.18
NDC1-201ENST00000371429 CLEC4EQ9ULY5 219 aa13.94□□□□□ -0.18
NDC1-201ENST00000371429 MEMO1Q9Y316 297 aa13.94□□□□□ -0.18
NDC1-201ENST00000371429 MROH6A6NGR9 719 aa13.94□□□□□ -0.18
NDC1-201ENST00000371429 SLC22A31A6NKX4 558 aa13.94□□□□□ -0.18
NDC1-201ENST00000371429 CLPXO76031 633 aa13.94□□□□□ -0.18
NDC1-201ENST00000371429 APOC1P02654 83 aa13.94□□□□□ -0.18
NDC1-201ENST00000371429 SLC2A2P11168 524 aaPredicted RBP13.94□□□□□ -0.18
NDC1-201ENST00000371429 PTPRRQ15256 657 aa13.94□□□□□ -0.18
NDC1-201ENST00000371429 PRAMEF8Q5VWM4 474 aa13.94□□□□□ -0.18
NDC1-201ENST00000371429 PRAMEF7Q5VXH5 474 aa13.94□□□□□ -0.18
NDC1-201ENST00000371429 CNTN4Q8IWV2 1026 aa13.94□□□□□ -0.18
NDC1-201ENST00000371429 NRMQ8IXM6 262 aa13.94□□□□□ -0.18
NDC1-201ENST00000371429 PROKR1Q8TCW9 393 aa13.94□□□□□ -0.18
NDC1-201ENST00000371429 BTNL2Q9UIR0 455 aa13.94□□□□□ -0.18
NDC1-201ENST00000371429 PRAMEF33A0A0G2JMD5 474 aa13.93□□□□□ -0.18
NDC1-201ENST00000371429 PRAMEF10O60809 474 aa13.93□□□□□ -0.18
NDC1-201ENST00000371429 ZFAND5O76080 213 aa13.93□□□□□ -0.18
NDC1-201ENST00000371429 SLC6A8P48029 635 aa13.93□□□□□ -0.18
NDC1-201ENST00000371429 GNG2P59768 71 aa13.93□□□□□ -0.18
NDC1-201ENST00000371429 CTXN1P60606 82 aa13.93□□□□□ -0.18
NDC1-201ENST00000371429 ZBED5Q49AG3 693 aa13.93□□□□□ -0.18
NDC1-201ENST00000371429 C4orf46Q504U0 113 aa13.93□□□□□ -0.18
NDC1-201ENST00000371429 SLC41A3Q96GZ6 507 aa13.93□□□□□ -0.18
NDC1-201ENST00000371429 ADOQ96SZ5 270 aa13.93□□□□□ -0.18
NDC1-201ENST00000371429 ACPTQ9BZG2 426 aa13.93□□□□□ -0.18
NDC1-201ENST00000371429 SACM1LQ9NTJ5 587 aa13.93□□□□□ -0.18
NDC1-201ENST00000371429 STOML2Q9UJZ1 356 aa13.93□□□□□ -0.18
NDC1-201ENST00000371429 PYCR1P32322 319 aa13.93□□□□□ -0.18
NDC1-201ENST00000371429 AHRP35869 848 aa13.93□□□□□ -0.18
NDC1-201ENST00000371429 ADAMTSL4Q6UY14 1074 aa13.93□□□□□ -0.18
NDC1-201ENST00000371429 ZNF782Q6ZMW2 699 aaPredicted RBP13.93□□□□□ -0.18
NDC1-201ENST00000371429 SNX29P2Q8IUI4 249 aa13.93□□□□□ -0.18
NDC1-201ENST00000371429 WFDC5Q8TCV5 224 aa13.93□□□□□ -0.18
NDC1-201ENST00000371429 ADAMTS19Q8TE59 1207 aa13.93□□□□□ -0.18
NDC1-201ENST00000371429 PDLIM5Q96HC4 596 aaKnown RBP13.93□□□□□ -0.18
NDC1-201ENST00000371429 MUS81Q96NY9 551 aa13.93□□□□□ -0.18
NDC1-201ENST00000371429 RXFP3Q9NSD7 469 aa13.93□□□□□ -0.18
NDC1-201ENST00000371429 MYH4Q9Y623 1939 aa13.93□□□□□ -0.18
NDC1-201ENST00000371429 C5orf51A6NDU8 294 aa13.93□□□□□ -0.18
NDC1-201ENST00000371429 FTCDNL1E5RQL4 147 aa13.93□□□□□ -0.18
NDC1-201ENST00000371429 SNAP29O95721 258 aa13.93□□□□□ -0.18
NDC1-201ENST00000371429 CDKL1Q00532 357 aa13.93□□□□□ -0.18
NDC1-201ENST00000371429 RAB39AQ14964 217 aa13.93□□□□□ -0.18
NDC1-201ENST00000371429 ZNF534Q76KX8 674 aa13.93□□□□□ -0.18
NDC1-201ENST00000371429 SLITRK4Q8IW52 837 aa13.93□□□□□ -0.18
NDC1-201ENST00000371429 TOMM5Q8N4H5 51 aa13.93□□□□□ -0.18
NDC1-201ENST00000371429 OR13H1Q8NG92 308 aa13.93□□□□□ -0.18
NDC1-201ENST00000371429 OR52E2Q8NGJ4 325 aa13.93□□□□□ -0.18
NDC1-201ENST00000371429 OR5B2Q96R09 309 aa13.93□□□□□ -0.18
NDC1-201ENST00000371429 MYNNQ9NPC7 610 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms