RNA–Protein interactions for RNA: ENST00000347559.6

LMNA-201, Transcript of lamin A/C, humanhuman

TSL 5 BASIC

Gene LMNA, Length 3,137 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-201ENST00000347559 KCND3Q9UK17 655 aa14.49□□□□□ -0.09
LMNA-201ENST00000347559 FLVCR2Q9UPI3 526 aa14.49□□□□□ -0.09
LMNA-201ENST00000347559 PRG3Q9Y2Y8 225 aaPredicted RBP14.49□□□□□ -0.09
LMNA-201ENST00000347559 ANKDD1BA6NHY2 528 aa14.49□□□□□ -0.09
LMNA-201ENST00000347559 PDCD5O14737 125 aa14.49□□□□□ -0.09
LMNA-201ENST00000347559 BNIP3LO60238 219 aa14.49□□□□□ -0.09
LMNA-201ENST00000347559 SULT1A3P0DMM9 295 aa14.49□□□□□ -0.09
LMNA-201ENST00000347559 SULT1A4P0DMN0 295 aa14.49□□□□□ -0.09
LMNA-201ENST00000347559 MMP11P24347 488 aa14.49□□□□□ -0.09
LMNA-201ENST00000347559 CDH4P55283 916 aa14.49□□□□□ -0.09
LMNA-201ENST00000347559 MAZP56270 477 aaKnown RBP14.49□□□□□ -0.09
LMNA-201ENST00000347559 OR10A3P58181 314 aa14.49□□□□□ -0.09
LMNA-201ENST00000347559 REEP3Q6NUK4 255 aa14.49□□□□□ -0.09
LMNA-201ENST00000347559 PODNL1Q6PEZ8 512 aa14.49□□□□□ -0.09
LMNA-201ENST00000347559 CD200R1LQ6Q8B3 271 aa14.49□□□□□ -0.09
LMNA-201ENST00000347559 LSRQ86X29 649 aaPredicted RBP14.49□□□□□ -0.09
LMNA-201ENST00000347559 GPC2Q8N158 579 aa14.49□□□□□ -0.09
LMNA-201ENST00000347559 ADAMTS19Q8TE59 1207 aa14.49□□□□□ -0.09
LMNA-201ENST00000347559 SPRYD4Q8WW59 207 aaPredicted RBP14.49□□□□□ -0.09
LMNA-201ENST00000347559 SLC38A2Q96QD8 506 aa14.49□□□□□ -0.09
LMNA-201ENST00000347559 TEFMQ96QE5 360 aaKnown RBP14.49□□□□□ -0.09
LMNA-201ENST00000347559 PARK7Q99497 189 aaKnown RBP14.49□□□□□ -0.09
LMNA-201ENST00000347559 PLA2G12AQ9BZM1 189 aa14.49□□□□□ -0.09
LMNA-201ENST00000347559 REEP4Q9H6H4 257 aa14.49□□□□□ -0.09
LMNA-201ENST00000347559 LDAHQ9H6V9 325 aa14.49□□□□□ -0.09
LMNA-201ENST00000347559 CD93Q9NPY3 652 aa14.49□□□□□ -0.09
LMNA-201ENST00000347559 PIM2Q9P1W9 311 aa14.49□□□□□ -0.09
LMNA-201ENST00000347559 POMT2Q9UKY4 750 aa14.49□□□□□ -0.09
LMNA-201ENST00000347559 CKAP5Q14008 2032 aa14.49□□□□□ -0.09
LMNA-201ENST00000347559 COL4A4P53420 1690 aaPredicted RBP14.48□□□□□ -0.09
LMNA-201ENST00000347559 KDM4FA0A1W2PPD8 638 aa14.48□□□□□ -0.09
LMNA-201ENST00000347559 MTMR11A4FU01 709 aa14.48□□□□□ -0.09
LMNA-201ENST00000347559 SRPRAP08240 638 aaKnown RBP14.48□□□□□ -0.09
LMNA-201ENST00000347559 MMP12P39900 470 aa14.48□□□□□ -0.09
LMNA-201ENST00000347559 PCBP3P57721 371 aaKnown RBP14.48□□□□□ -0.09
LMNA-201ENST00000347559 RAB40BQ12829 278 aa14.48□□□□□ -0.09
LMNA-201ENST00000347559 CRHR2Q13324 411 aa14.48□□□□□ -0.09
LMNA-201ENST00000347559 GNA13Q14344 377 aa14.48□□□□□ -0.09
LMNA-201ENST00000347559 SFRP4Q6FHJ7 346 aaPredicted RBP14.48□□□□□ -0.09
LMNA-201ENST00000347559 THOC6Q86W42 341 aaKnown RBP14.48□□□□□ -0.09
LMNA-201ENST00000347559 LRRC28Q86X40 367 aaPredicted RBP14.48□□□□□ -0.09
LMNA-201ENST00000347559 HS6ST3Q8IZP7 471 aa14.48□□□□□ -0.09
LMNA-201ENST00000347559 MMP21Q8N119 569 aa14.48□□□□□ -0.09
LMNA-201ENST00000347559 GPRC5AQ8NFJ5 357 aa14.48□□□□□ -0.09
LMNA-201ENST00000347559 OR4D11Q8NGI4 311 aa14.48□□□□□ -0.09
LMNA-201ENST00000347559 RADILQ96JH8 1075 aa14.48□□□□□ -0.09
LMNA-201ENST00000347559 GPA33Q99795 319 aa14.48□□□□□ -0.09
LMNA-201ENST00000347559 IFT22Q9H7X7 185 aa14.48□□□□□ -0.09
LMNA-201ENST00000347559 KRBOX1C9JBD0 128 aa14.48□□□□□ -0.09
LMNA-201ENST00000347559 M0R3H8 397 aa14.48□□□□□ -0.09
LMNA-201ENST00000347559 CBX7O95931 251 aa14.48□□□□□ -0.09
LMNA-201ENST00000347559 URODP06132 367 aa14.48□□□□□ -0.09
LMNA-201ENST00000347559 SHC1P29353 583 aa14.48□□□□□ -0.09
LMNA-201ENST00000347559 TIA1P31483 386 aaKnown RBP eCLIP14.48□□□□□ -0.092e-13■□□□□ 9.9
LMNA-201ENST00000347559 GAS1P54826 345 aa14.48□□□□□ -0.09
LMNA-201ENST00000347559 DGCR2P98153 550 aa14.48□□□□□ -0.09
LMNA-201ENST00000347559 TAP2Q03519 686 aa14.48□□□□□ -0.09
LMNA-201ENST00000347559 NHLRC3Q5JS37 347 aa14.48□□□□□ -0.09
LMNA-201ENST00000347559 SZRD1Q7Z422 152 aa14.48□□□□□ -0.09
LMNA-201ENST00000347559 ARIH2OSQ8N7S6 290 aa14.48□□□□□ -0.09
LMNA-201ENST00000347559 RPLP0P6Q8NHW5 317 aa14.48□□□□□ -0.09
LMNA-201ENST00000347559 ASB11Q8WXH4 323 aa14.48□□□□□ -0.09
LMNA-201ENST00000347559 SUSD3Q96L08 255 aa14.48□□□□□ -0.09
LMNA-201ENST00000347559 SLC6A15Q9H2J7 730 aa14.48□□□□□ -0.09
LMNA-201ENST00000347559 NOD1Q9Y239 953 aa14.48□□□□□ -0.09
LMNA-201ENST00000347559 EXOSC1Q9Y3B2 195 aaKnown RBP14.48□□□□□ -0.09
LMNA-201ENST00000347559 ARPC4-TTLL3A0A0A6YYG9 625 aa14.48□□□□□ -0.09
LMNA-201ENST00000347559 A0A1W2PRB8 838 aa14.48□□□□□ -0.09
LMNA-201ENST00000347559 H3BNC9 293 aa14.48□□□□□ -0.09
LMNA-201ENST00000347559 ZNF593O00488 134 aaPredicted RBP14.48□□□□□ -0.09
LMNA-201ENST00000347559 PRODHO43272 600 aa14.48□□□□□ -0.09
LMNA-201ENST00000347559 RAB3AP20336 220 aa14.48□□□□□ -0.09
LMNA-201ENST00000347559 HNF1BP35680 557 aa14.48□□□□□ -0.09
LMNA-201ENST00000347559 MLLT1Q03111 559 aaPredicted RBP14.48□□□□□ -0.09
LMNA-201ENST00000347559 TUSC3Q13454 348 aa14.48□□□□□ -0.09
LMNA-201ENST00000347559 ZNF169Q14929 603 aaPredicted RBP14.48□□□□□ -0.09
LMNA-201ENST00000347559 ETFDHQ16134 617 aa14.48□□□□□ -0.09
LMNA-201ENST00000347559 CDKL4Q5MAI5 379 aa14.48□□□□□ -0.09
LMNA-201ENST00000347559 RFLNAQ6ZTI6 216 aa14.48□□□□□ -0.09
LMNA-201ENST00000347559 OLIG3Q7RTU3 272 aa14.48□□□□□ -0.09
LMNA-201ENST00000347559 ZER1Q7Z7L7 766 aa14.48□□□□□ -0.09
LMNA-201ENST00000347559 OR4K5Q8NGD3 323 aa14.48□□□□□ -0.09
LMNA-201ENST00000347559 ADAMTS14Q8WXS8 1223 aa14.48□□□□□ -0.09
LMNA-201ENST00000347559 NPAS1Q99742 590 aa14.48□□□□□ -0.09
LMNA-201ENST00000347559 PRR23D1E9PI22 279 aaPredicted RBP14.47□□□□□ -0.09
LMNA-201ENST00000347559 LINC01387J3KSC0 135 aa14.47□□□□□ -0.09
LMNA-201ENST00000347559 CD160O95971 181 aa14.47□□□□□ -0.09
LMNA-201ENST00000347559 TGFB1P01137 390 aa14.47□□□□□ -0.09
LMNA-201ENST00000347559 IGLV3-27P01718 113 aa14.47□□□□□ -0.09
LMNA-201ENST00000347559 TFP02787 698 aa14.47□□□□□ -0.09
LMNA-201ENST00000347559 PRR23D2P0DMB1 279 aaPredicted RBP14.47□□□□□ -0.09
LMNA-201ENST00000347559 PCSK2P16519 638 aa14.47□□□□□ -0.09
LMNA-201ENST00000347559 NSG1P42857 185 aa14.47□□□□□ -0.09
LMNA-201ENST00000347559 SLC6A11P48066 632 aa14.47□□□□□ -0.09
LMNA-201ENST00000347559 HNMTP50135 292 aa14.47□□□□□ -0.09
LMNA-201ENST00000347559 DEFA5Q01523 94 aa14.47□□□□□ -0.09
LMNA-201ENST00000347559 DSG2Q14126 1118 aa14.47□□□□□ -0.09
LMNA-201ENST00000347559 ELOAQ14241 798 aaKnown RBP14.47□□□□□ -0.09
LMNA-201ENST00000347559 MPEG1Q2M385 716 aa14.47□□□□□ -0.09
LMNA-201ENST00000347559 SLC36A2Q495M3 483 aa14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms