RNA–Protein interactions for RNA: ENST00000337299.6

COL2A1-201, Transcript of collagen type II alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL2A1, Length 4,257 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-201ENST00000337299 LIPCP11150 499 aa12.57□□□□□ -0.4
COL2A1-201ENST00000337299 EDNRBP24530 442 aa12.57□□□□□ -0.4
COL2A1-201ENST00000337299 HOXA11P31270 313 aaPredicted RBP12.57□□□□□ -0.4
COL2A1-201ENST00000337299 TIA1P31483 386 aaKnown RBP eCLIP12.57□□□□□ -0.4
COL2A1-201ENST00000337299 LDLRAD1Q5T700 205 aa12.57□□□□□ -0.4
COL2A1-201ENST00000337299 SLC22A10Q63ZE4 541 aa12.57□□□□□ -0.4
COL2A1-201ENST00000337299 PEG10Q86TG7 708 aaKnown RBP12.57□□□□□ -0.4
COL2A1-201ENST00000337299 RNASE11Q8TAA1 199 aaKnown RBP12.57□□□□□ -0.4
COL2A1-201ENST00000337299 ABCG4Q9H172 646 aa12.57□□□□□ -0.4
COL2A1-201ENST00000337299 ELL3Q9HB65 397 aaPredicted RBP12.57□□□□□ -0.4
COL2A1-201ENST00000337299 PCDHGB7Q9Y5F8 929 aa12.57□□□□□ -0.4
COL2A1-201ENST00000337299 CFAP20Q9Y6A4 193 aaKnown RBP12.57□□□□□ -0.4
COL2A1-201ENST00000337299 COL16A1Q07092 1604 aaPredicted RBP12.57□□□□□ -0.4
COL2A1-201ENST00000337299 GABRPO00591 440 aa12.57□□□□□ -0.4
COL2A1-201ENST00000337299 RBBP9O75884 186 aa12.57□□□□□ -0.4
COL2A1-201ENST00000337299 KRT33AO76009 404 aa12.57□□□□□ -0.4
COL2A1-201ENST00000337299 F2P00734 622 aa12.57□□□□□ -0.4
COL2A1-201ENST00000337299 INHAP05111 366 aa12.57□□□□□ -0.4
COL2A1-201ENST00000337299 UCHL1P09936 223 aa12.57□□□□□ -0.4
COL2A1-201ENST00000337299 HSD3B1P14060 373 aa12.57□□□□□ -0.4
COL2A1-201ENST00000337299 CSKP41240 450 aa12.57□□□□□ -0.4
COL2A1-201ENST00000337299 AP1S2P56377 157 aa12.57□□□□□ -0.4
COL2A1-201ENST00000337299 AP1S1P61966 158 aa12.57□□□□□ -0.4
COL2A1-201ENST00000337299 KCTD20Q7Z5Y7 419 aa12.57□□□□□ -0.4
COL2A1-201ENST00000337299 CPOQ8IVL8 374 aa12.57□□□□□ -0.4
COL2A1-201ENST00000337299 CCDC107Q8WV48 283 aa12.57□□□□□ -0.4
COL2A1-201ENST00000337299 SH2B3Q9UQQ2 575 aa12.57□□□□□ -0.4
COL2A1-201ENST00000337299 SPACA6W5XKT8 324 aa12.57□□□□□ -0.4
COL2A1-201ENST00000337299 SMCHD1A6NHR9 2005 aa12.57□□□□□ -0.4
COL2A1-201ENST00000337299 GABRR3A8MPY1 467 aa12.57□□□□□ -0.4
COL2A1-201ENST00000337299 MMP20O60882 483 aa12.57□□□□□ -0.4
COL2A1-201ENST00000337299 RGS11O94810 467 aa12.57□□□□□ -0.4
COL2A1-201ENST00000337299 ELFN1P0C7U0 828 aa12.57□□□□□ -0.4
COL2A1-201ENST00000337299 KCNE1P15382 129 aa12.57□□□□□ -0.4
COL2A1-201ENST00000337299 RAB3AP20336 220 aa12.57□□□□□ -0.4
COL2A1-201ENST00000337299 VEGFCP49767 419 aa12.57□□□□□ -0.4
COL2A1-201ENST00000337299 FXYD6P3P58550 94 aa12.57□□□□□ -0.4
COL2A1-201ENST00000337299 E2F1Q01094 437 aa12.57□□□□□ -0.4
COL2A1-201ENST00000337299 GPR33Q49SQ1 333 aa12.57□□□□□ -0.4
COL2A1-201ENST00000337299 XKR7Q5GH72 579 aa12.57□□□□□ -0.4
COL2A1-201ENST00000337299 TEX261Q6UWH6 196 aa12.57□□□□□ -0.4
COL2A1-201ENST00000337299 GPALPP1Q8IXQ4 340 aa12.57□□□□□ -0.4
COL2A1-201ENST00000337299 SCAMP4Q969E2 229 aa12.57□□□□□ -0.4
COL2A1-201ENST00000337299 ZNF566Q969W8 418 aa12.57□□□□□ -0.4
COL2A1-201ENST00000337299 PFDN5Q99471 154 aa12.57□□□□□ -0.4
COL2A1-201ENST00000337299 ADAP2Q9NPF8 381 aa12.57□□□□□ -0.4
COL2A1-201ENST00000337299 SIRT5Q9NXA8 310 aa12.57□□□□□ -0.4
COL2A1-201ENST00000337299 U3KQ87 197 aa12.57□□□□□ -0.4
COL2A1-201ENST00000337299 UBR2Q8IWV8 1755 aa12.57□□□□□ -0.4
COL2A1-201ENST00000337299 IGKV6D-21A0A0A0MT36 114 aa12.57□□□□□ -0.4
COL2A1-201ENST00000337299 A0A0A6YYJ9 748 aa12.57□□□□□ -0.4
COL2A1-201ENST00000337299 PRSS44E7EML9 344 aa12.57□□□□□ -0.4
COL2A1-201ENST00000337299 H3BQ06 376 aaPredicted RBP12.57□□□□□ -0.4
COL2A1-201ENST00000337299 POU3F3P20264 500 aaPredicted RBP12.57□□□□□ -0.4
COL2A1-201ENST00000337299 ST3GAL3Q11203 375 aa12.57□□□□□ -0.4
COL2A1-201ENST00000337299 PRSS42Q7Z5A4 293 aa12.57□□□□□ -0.4
COL2A1-201ENST00000337299 TMC8Q8IU68 726 aa12.57□□□□□ -0.4
COL2A1-201ENST00000337299 C12orf45Q8N5I9 185 aaPredicted RBP12.57□□□□□ -0.4
COL2A1-201ENST00000337299 CYB561A3Q8NBI2 242 aa12.57□□□□□ -0.4
COL2A1-201ENST00000337299 HUS1BQ8NHY5 278 aa12.57□□□□□ -0.4
COL2A1-201ENST00000337299 TMEM40Q8WWA1 233 aa12.57□□□□□ -0.4
COL2A1-201ENST00000337299 UPK1AO00322 258 aa12.56□□□□□ -0.4
COL2A1-201ENST00000337299 MMP12P39900 470 aa12.56□□□□□ -0.4
COL2A1-201ENST00000337299 RBM34P42696 430 aaKnown RBP12.56□□□□□ -0.4
COL2A1-201ENST00000337299 METTL11BQ5VVY1 283 aa12.56□□□□□ -0.4
COL2A1-201ENST00000337299 HDDC3Q8N4P3 179 aa12.56□□□□□ -0.4
COL2A1-201ENST00000337299 CLDN22Q8N7P3 220 aa12.56□□□□□ -0.4
COL2A1-201ENST00000337299 OR10K1Q8NGX5 313 aa12.56□□□□□ -0.4
COL2A1-201ENST00000337299 LRRC46Q96FV0 321 aa12.56□□□□□ -0.4
COL2A1-201ENST00000337299 SEC22CQ9BRL7 303 aa12.56□□□□□ -0.4
COL2A1-201ENST00000337299 ARNT2Q9HBZ2 717 aa12.56□□□□□ -0.4
COL2A1-201ENST00000337299 TRAV20A0A0B4J274 112 aa12.56□□□□□ -0.4
COL2A1-201ENST00000337299 LEUTXA8MZ59 168 aa12.56□□□□□ -0.4
COL2A1-201ENST00000337299 EEF1E1-BLOC1S5C9J1V9 151 aa12.56□□□□□ -0.4
COL2A1-201ENST00000337299 TO15178 435 aa12.56□□□□□ -0.4
COL2A1-201ENST00000337299 PRSS23O95084 383 aa12.56□□□□□ -0.4
COL2A1-201ENST00000337299 ZNF35P13682 527 aa12.56□□□□□ -0.4
COL2A1-201ENST00000337299 SNRPBP14678 240 aaKnown RBP12.56□□□□□ -0.4
COL2A1-201ENST00000337299 ACVR2AP27037 513 aa12.56□□□□□ -0.4
COL2A1-201ENST00000337299 GRPRP30550 384 aa12.56□□□□□ -0.4
COL2A1-201ENST00000337299 AQP2P41181 271 aa12.56□□□□□ -0.4
COL2A1-201ENST00000337299 PER3P56645 1201 aa12.56□□□□□ -0.4
COL2A1-201ENST00000337299 SLC5A12Q1EHB4 618 aa12.56□□□□□ -0.4
COL2A1-201ENST00000337299 FCRLBQ6BAA4 426 aa12.56□□□□□ -0.4
COL2A1-201ENST00000337299 PRSS55Q6UWB4 352 aaPredicted RBP12.56□□□□□ -0.4
COL2A1-201ENST00000337299 SIAH3Q8IW03 269 aa12.56□□□□□ -0.4
COL2A1-201ENST00000337299 TEX26Q8N6G2 289 aa12.56□□□□□ -0.4
COL2A1-201ENST00000337299 OR4M1Q8NGD0 313 aa12.56□□□□□ -0.4
COL2A1-201ENST00000337299 OR52N2Q8NGI0 321 aa12.56□□□□□ -0.4
COL2A1-201ENST00000337299 MCHR1Q99705 422 aa12.56□□□□□ -0.4
COL2A1-201ENST00000337299 SLC6A13Q9NSD5 602 aa12.56□□□□□ -0.4
COL2A1-201ENST00000337299 GSKIPQ9P0R6 139 aa12.56□□□□□ -0.4
COL2A1-201ENST00000337299 POLR1DQ9Y2S0 133 aa12.56□□□□□ -0.4
COL2A1-201ENST00000337299 SDC3O75056 442 aa12.56□□□□□ -0.4
COL2A1-201ENST00000337299 ITGA10O75578 1167 aa12.56□□□□□ -0.4
COL2A1-201ENST00000337299 DBIP07108 87 aaKnown RBP12.56□□□□□ -0.4
COL2A1-201ENST00000337299 GNSP15586 552 aa12.56□□□□□ -0.4
COL2A1-201ENST00000337299 PDHA2P29803 388 aa12.56□□□□□ -0.4
COL2A1-201ENST00000337299 PCGF2P35227 344 aa12.56□□□□□ -0.4
COL2A1-201ENST00000337299 RORAP35398 523 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms