RNA–Protein interactions for RNA: ENST00000336824.8

FNDC3B-201, Transcript of fibronectin type III domain containing 3B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FNDC3B, Length 7,904 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3B-201ENST00000336824 CLEC12AQ5QGZ9 265 aa8.77□□□□□ -1.01
FNDC3B-201ENST00000336824 YTHDF1Q9BYJ9 559 aaKnown RBP8.77□□□□□ -1.01
FNDC3B-201ENST00000336824 CD93Q9NPY3 652 aa8.77□□□□□ -1.01
FNDC3B-201ENST00000336824 PI4KAP42356 2102 aa8.77□□□□□ -1.01
FNDC3B-201ENST00000336824 GATSQ8NAP1 163 aa8.77□□□□□ -1.01
FNDC3B-201ENST00000336824 ASB6Q9NWX5 421 aa8.77□□□□□ -1.01
FNDC3B-201ENST00000336824 SPHK1Q9NYA1 384 aa8.77□□□□□ -1.01
FNDC3B-201ENST00000336824 CRNNQ9UBG3 495 aaPredicted RBP8.77□□□□□ -1.01
FNDC3B-201ENST00000336824 NPIPA2E9PIF3 369 aa8.77□□□□□ -1.01
FNDC3B-201ENST00000336824 NPIPA3F8WFD2 350 aa8.77□□□□□ -1.01
FNDC3B-201ENST00000336824 BLOC1S5-TXNDC5H3BN57 136 aa8.77□□□□□ -1.01
FNDC3B-201ENST00000336824 CTNSO60931 367 aa8.77□□□□□ -1.01
FNDC3B-201ENST00000336824 HMGN2P05204 90 aaKnown RBP8.77□□□□□ -1.01
FNDC3B-201ENST00000336824 ETS2P15036 469 aa8.77□□□□□ -1.01
FNDC3B-201ENST00000336824 HK1P19367 917 aa8.77□□□□□ -1.01
FNDC3B-201ENST00000336824 HSD17B7P56937 341 aa8.77□□□□□ -1.01
FNDC3B-201ENST00000336824 RUNDC3AQ59EK9 446 aa8.77□□□□□ -1.01
FNDC3B-201ENST00000336824 LAIR1Q6GTX8 287 aa8.77□□□□□ -1.01
FNDC3B-201ENST00000336824 RPTNQ6XPR3 784 aa8.77□□□□□ -1.01
FNDC3B-201ENST00000336824 ABI3BPQ7Z7G0 1075 aa8.77□□□□□ -1.01
FNDC3B-201ENST00000336824 OR7G1Q8NGA0 311 aa8.77□□□□□ -1.01
FNDC3B-201ENST00000336824 OR10H4Q8NGA5 316 aa8.77□□□□□ -1.01
FNDC3B-201ENST00000336824 C9orf43Q8TAL5 461 aaPredicted RBP8.77□□□□□ -1.01
FNDC3B-201ENST00000336824 GPBAR1Q8TDU6 330 aa8.77□□□□□ -1.01
FNDC3B-201ENST00000336824 NODALQ96S42 347 aa8.77□□□□□ -1.01
FNDC3B-201ENST00000336824 PKP2Q99959 881 aa8.77□□□□□ -1.01
FNDC3B-201ENST00000336824 DPH2Q9BQC3 489 aaPredicted RBP8.77□□□□□ -1.01
FNDC3B-201ENST00000336824 TIMMDC1Q9NPL8 285 aa8.77□□□□□ -1.01
FNDC3B-201ENST00000336824 USP36Q9P275 1121 aaKnown RBP8.77□□□□□ -1.01
FNDC3B-201ENST00000336824 POMT2Q9UKY4 750 aa8.77□□□□□ -1.01
FNDC3B-201ENST00000336824 PCDHGA7Q9Y5G6 932 aa8.77□□□□□ -1.01
FNDC3B-201ENST00000336824 SLC22A7Q9Y694 548 aa8.77□□□□□ -1.01
FNDC3B-201ENST00000336824 LOC100130705A0A1B0GUX0 176 aa8.77□□□□□ -1.01
FNDC3B-201ENST00000336824 VSTM5A8MXK1 200 aa8.77□□□□□ -1.01
FNDC3B-201ENST00000336824 ALDOCP09972 364 aaKnown RBP8.77□□□□□ -1.01
FNDC3B-201ENST00000336824 FZD2Q14332 565 aa8.77□□□□□ -1.01
FNDC3B-201ENST00000336824 PAGE3Q5JUK9 113 aa8.77□□□□□ -1.01
FNDC3B-201ENST00000336824 SHISA6Q6ZSJ9 500 aa8.77□□□□□ -1.01
FNDC3B-201ENST00000336824 NAGSQ8N159 534 aa8.77□□□□□ -1.01
FNDC3B-201ENST00000336824 RNF175Q8N4F7 328 aa8.77□□□□□ -1.01
FNDC3B-201ENST00000336824 PATE1Q8WXA2 126 aa8.77□□□□□ -1.01
FNDC3B-201ENST00000336824 SLC46A1Q96NT5 459 aa8.77□□□□□ -1.01
FNDC3B-201ENST00000336824 SACM1LQ9NTJ5 587 aa8.77□□□□□ -1.01
FNDC3B-201ENST00000336824 DSCR3O14972 297 aa8.77□□□□□ -1.01
FNDC3B-201ENST00000336824 SLC35E2P0CK97 266 aa8.77□□□□□ -1.01
FNDC3B-201ENST00000336824 AQP4P55087 323 aa8.77□□□□□ -1.01
FNDC3B-201ENST00000336824 HBA1P69905 142 aa8.77□□□□□ -1.01
FNDC3B-201ENST00000336824 ANGPT1Q15389 498 aa8.77□□□□□ -1.01
FNDC3B-201ENST00000336824 NKAIN1Q4KMZ8 207 aa8.77□□□□□ -1.01
FNDC3B-201ENST00000336824 DCST2Q5T1A1 773 aa8.77□□□□□ -1.01
FNDC3B-201ENST00000336824 PDZK1Q5T2W1 519 aa8.77□□□□□ -1.01
FNDC3B-201ENST00000336824 AHSA2Q719I0 299 aa8.77□□□□□ -1.01
FNDC3B-201ENST00000336824 KLHDC8BQ8IXV7 354 aa8.77□□□□□ -1.01
FNDC3B-201ENST00000336824 PLEKHA1Q9HB21 404 aa8.77□□□□□ -1.01
FNDC3B-201ENST00000336824 RNF215Q9Y6U7 377 aa8.77□□□□□ -1.01
FNDC3B-201ENST00000336824 CENPXA8MT69 81 aa8.76□□□□□ -1.01
FNDC3B-201ENST00000336824 ANKRD28O15084 1053 aa8.76□□□□□ -1.01
FNDC3B-201ENST00000336824 NSA2O95478 260 aaKnown RBP8.76□□□□□ -1.01
FNDC3B-201ENST00000336824 HPRP00739 348 aa8.76□□□□□ -1.01
FNDC3B-201ENST00000336824 CKMT2P17540 419 aa8.76□□□□□ -1.01
FNDC3B-201ENST00000336824 SELENOWP63302 87 aa8.76□□□□□ -1.01
FNDC3B-201ENST00000336824 PMS2P3Q13401 168 aa8.76□□□□□ -1.01
FNDC3B-201ENST00000336824 FAM53BQ14153 422 aa8.76□□□□□ -1.01
FNDC3B-201ENST00000336824 ALG10BQ5I7T1 473 aa8.76□□□□□ -1.01
FNDC3B-201ENST00000336824 SFTPA1Q8IWL2 248 aa8.76□□□□□ -1.01
FNDC3B-201ENST00000336824 UBQLN4Q9NRR5 601 aa8.76□□□□□ -1.01
FNDC3B-201ENST00000336824 MKLN1Q9UL63 735 aa8.76□□□□□ -1.01
FNDC3B-201ENST00000336824 TRAPPC13A5PLN9 417 aa8.76□□□□□ -1.01
FNDC3B-201ENST00000336824 PRR23D1E9PI22 279 aaPredicted RBP8.76□□□□□ -1.01
FNDC3B-201ENST00000336824 H6PDO95479 791 aa8.76□□□□□ -1.01
FNDC3B-201ENST00000336824 PRR23D2P0DMB1 279 aaPredicted RBP8.76□□□□□ -1.01
FNDC3B-201ENST00000336824 WDR5BQ86VZ2 330 aa8.76□□□□□ -1.01
FNDC3B-201ENST00000336824 RBP7Q96R05 134 aa8.76□□□□□ -1.01
FNDC3B-201ENST00000336824 WDR37Q9Y2I8 494 aa8.76□□□□□ -1.01
FNDC3B-201ENST00000336824 RP1L1Q8IWN7 2480 aaPredicted RBP8.76□□□□□ -1.01
FNDC3B-201ENST00000336824 ABCA7Q8IZY2 2146 aa8.76□□□□□ -1.01
FNDC3B-201ENST00000336824 NME4O00746 187 aa8.76□□□□□ -1.01
FNDC3B-201ENST00000336824 SLC30A4O14863 429 aa8.76□□□□□ -1.01
FNDC3B-201ENST00000336824 EEF1A2Q05639 463 aaKnown RBP8.76□□□□□ -1.01
FNDC3B-201ENST00000336824 ZNF423Q2M1K9 1284 aa8.76□□□□□ -1.01
FNDC3B-201ENST00000336824 SLC48A1Q6P1K1 146 aa8.76□□□□□ -1.01
FNDC3B-201ENST00000336824 C6orf15Q6UXA7 325 aaPredicted RBP8.76□□□□□ -1.01
FNDC3B-201ENST00000336824 RAB11FIP2Q7L804 512 aa8.76□□□□□ -1.01
FNDC3B-201ENST00000336824 MISPQ8IVT2 679 aa8.76□□□□□ -1.01
FNDC3B-201ENST00000336824 GID4Q8IVV7 300 aa8.76□□□□□ -1.01
FNDC3B-201ENST00000336824 CREB3L4Q8TEY5 395 aa8.76□□□□□ -1.01
FNDC3B-201ENST00000336824 GTF2H4Q92759 462 aa8.76□□□□□ -1.01
FNDC3B-201ENST00000336824 MAL2Q969L2 176 aa8.76□□□□□ -1.01
FNDC3B-201ENST00000336824 C6orf62Q9GZU0 229 aaPredicted RBP8.76□□□□□ -1.01
FNDC3B-201ENST00000336824 CBLCQ9ULV8 474 aa8.76□□□□□ -1.01
FNDC3B-201ENST00000336824 PLPP1O14494 284 aa8.76□□□□□ -1.01
FNDC3B-201ENST00000336824 IL33O95760 270 aa8.76□□□□□ -1.01
FNDC3B-201ENST00000336824 NXPH1P58417 271 aa8.76□□□□□ -1.01
FNDC3B-201ENST00000336824 GPR19Q15760 415 aa8.76□□□□□ -1.01
FNDC3B-201ENST00000336824 C3orf38Q5JPI3 329 aa8.76□□□□□ -1.01
FNDC3B-201ENST00000336824 ATG14Q6ZNE5 492 aa8.76□□□□□ -1.01
FNDC3B-201ENST00000336824 ZNF740Q8NDX6 193 aa8.76□□□□□ -1.01
FNDC3B-201ENST00000336824 COPS4Q9BT78 406 aa8.76□□□□□ -1.01
FNDC3B-201ENST00000336824 SOX1O00570 391 aaPredicted RBP8.76□□□□□ -1.01
FNDC3B-201ENST00000336824 PCDH1Q08174 1060 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms