RNA–Protein interactions for RNA: ENST00000335508.10

SF3B1-201, Transcript of splicing factor 3b subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B1, Length 6,526 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-201ENST00000335508 YY2O15391 372 aa6.48□□□□□ -1.37
SF3B1-201ENST00000335508 CPNE3O75131 537 aaKnown RBP6.48□□□□□ -1.37
SF3B1-201ENST00000335508 ALDOCP09972 364 aaKnown RBP6.48□□□□□ -1.37
SF3B1-201ENST00000335508 CERS1P27544 350 aa6.48□□□□□ -1.37
SF3B1-201ENST00000335508 GCGRP47871 477 aa6.48□□□□□ -1.37
SF3B1-201ENST00000335508 FNTBP49356 437 aa6.48□□□□□ -1.37
SF3B1-201ENST00000335508 ATP12AP54707 1039 aa6.48□□□□□ -1.37
SF3B1-201ENST00000335508 ACTC1P68032 377 aa6.48□□□□□ -1.37
SF3B1-201ENST00000335508 ACTA1P68133 377 aa6.48□□□□□ -1.37
SF3B1-201ENST00000335508 HBA1P69905 142 aa6.48□□□□□ -1.37
SF3B1-201ENST00000335508 CLCA4Q14CN2 919 aa6.48□□□□□ -1.37
SF3B1-201ENST00000335508 SGCBQ16585 318 aa6.48□□□□□ -1.37
SF3B1-201ENST00000335508 TCTN1Q2MV58 587 aa6.48□□□□□ -1.37
SF3B1-201ENST00000335508 ENPP6Q6UWR7 440 aa6.48□□□□□ -1.37
SF3B1-201ENST00000335508 VRK3Q8IV63 474 aa6.48□□□□□ -1.37
SF3B1-201ENST00000335508 ALDH16A1Q8IZ83 802 aa6.48□□□□□ -1.37
SF3B1-201ENST00000335508 OR2T33Q8NG76 320 aa6.48□□□□□ -1.37
SF3B1-201ENST00000335508 ZFP90Q8TF47 636 aa6.48□□□□□ -1.37
SF3B1-201ENST00000335508 EID2BQ96D98 161 aa6.48□□□□□ -1.37
SF3B1-201ENST00000335508 FEVQ99581 238 aa6.48□□□□□ -1.37
SF3B1-201ENST00000335508 TAS2R10Q9NYW0 307 aa6.48□□□□□ -1.37
SF3B1-201ENST00000335508 CKLFQ9UBR5 152 aa6.48□□□□□ -1.37
SF3B1-201ENST00000335508 CA5BQ9Y2D0 317 aa6.48□□□□□ -1.37
SF3B1-201ENST00000335508 CORINQ9Y5Q5 1042 aa6.48□□□□□ -1.37
SF3B1-201ENST00000335508 PTGDR2Q9Y5Y4 395 aa6.48□□□□□ -1.37
SF3B1-201ENST00000335508 ABCA7Q8IZY2 2146 aa6.47□□□□□ -1.37
SF3B1-201ENST00000335508 HMGB3O15347 200 aaKnown RBP6.47□□□□□ -1.37
SF3B1-201ENST00000335508 MRPS14O60783 128 aaKnown RBP6.47□□□□□ -1.37
SF3B1-201ENST00000335508 SERPINA3P01011 423 aa6.47□□□□□ -1.37
SF3B1-201ENST00000335508 FURINP09958 794 aa6.47□□□□□ -1.37
SF3B1-201ENST00000335508 POU3F3P20264 500 aaPredicted RBP6.47□□□□□ -1.37
SF3B1-201ENST00000335508 FKBP2P26885 142 aaKnown RBP6.47□□□□□ -1.37
SF3B1-201ENST00000335508 ZNF41P51814 821 aaPredicted RBP6.47□□□□□ -1.37
SF3B1-201ENST00000335508 CRISP1P54107 249 aa6.47□□□□□ -1.37
SF3B1-201ENST00000335508 NXPH1P58417 271 aa6.47□□□□□ -1.37
SF3B1-201ENST00000335508 TNFRSF17Q02223 184 aa6.47□□□□□ -1.37
SF3B1-201ENST00000335508 DSG2Q14126 1118 aa6.47□□□□□ -1.37
SF3B1-201ENST00000335508 UGT8Q16880 541 aa6.47□□□□□ -1.37
SF3B1-201ENST00000335508 PAPD4Q6PIY7 484 aaKnown RBP6.47□□□□□ -1.37
SF3B1-201ENST00000335508 C15orf40Q8WUR7 153 aa6.47□□□□□ -1.37
SF3B1-201ENST00000335508 SNRNP27Q8WVK2 155 aaKnown RBP6.47□□□□□ -1.37
SF3B1-201ENST00000335508 KAT2AQ92830 837 aa6.47□□□□□ -1.37
SF3B1-201ENST00000335508 OMA1Q96E52 524 aa6.47□□□□□ -1.37
SF3B1-201ENST00000335508 ZNF354BQ96LW1 612 aa6.47□□□□□ -1.37
SF3B1-201ENST00000335508 PKP2Q99959 881 aa6.47□□□□□ -1.37
SF3B1-201ENST00000335508 CPPED1Q9BRF8 314 aaPredicted RBP6.47□□□□□ -1.37
SF3B1-201ENST00000335508 ANKRD19PQ9H560 264 aa6.47□□□□□ -1.37
SF3B1-201ENST00000335508 PALMDQ9NP74 551 aa6.47□□□□□ -1.37
SF3B1-201ENST00000335508 ZC4H2Q9NQZ6 224 aa6.47□□□□□ -1.37
SF3B1-201ENST00000335508 POMT2Q9UKY4 750 aa6.47□□□□□ -1.37
SF3B1-201ENST00000335508 COLQQ9Y215 455 aaPredicted RBP6.47□□□□□ -1.37
SF3B1-201ENST00000335508 PCDHGA7Q9Y5G6 932 aa6.47□□□□□ -1.37
SF3B1-201ENST00000335508 A0A1B0GX78 115 aa6.47□□□□□ -1.37
SF3B1-201ENST00000335508 SLC22A31A6NKX4 558 aa6.47□□□□□ -1.37
SF3B1-201ENST00000335508 VSTM2BA6NLU5 285 aa6.47□□□□□ -1.37
SF3B1-201ENST00000335508 H0YIG0 161 aa6.47□□□□□ -1.37
SF3B1-201ENST00000335508 BRINP1O60477 761 aa6.47□□□□□ -1.37
SF3B1-201ENST00000335508 CPOXP36551 454 aa6.47□□□□□ -1.37
SF3B1-201ENST00000335508 CAPZA1P52907 286 aa6.47□□□□□ -1.37
SF3B1-201ENST00000335508 MAZP56270 477 aaKnown RBP6.47□□□□□ -1.37
SF3B1-201ENST00000335508 TAS2R43P59537 309 aa6.47□□□□□ -1.37
SF3B1-201ENST00000335508 B4GALNT1Q00973 533 aa6.47□□□□□ -1.37
SF3B1-201ENST00000335508 NPRL3Q12980 569 aa6.47□□□□□ -1.37
SF3B1-201ENST00000335508 FGL2Q14314 439 aa6.47□□□□□ -1.37
SF3B1-201ENST00000335508 GINS1Q14691 196 aa6.47□□□□□ -1.37
SF3B1-201ENST00000335508 MS4A15Q8N5U1 240 aa6.47□□□□□ -1.37
SF3B1-201ENST00000335508 GPBAR1Q8TDU6 330 aa6.47□□□□□ -1.37
SF3B1-201ENST00000335508 S100ZQ8WXG8 99 aa6.47□□□□□ -1.37
SF3B1-201ENST00000335508 COQ8BQ96D53 544 aa6.47□□□□□ -1.37
SF3B1-201ENST00000335508 MOCOSQ96EN8 888 aa6.47□□□□□ -1.37
SF3B1-201ENST00000335508 SGTBQ96EQ0 304 aa6.47□□□□□ -1.37
SF3B1-201ENST00000335508 PLAC1Q9HBJ0 212 aa6.47□□□□□ -1.37
SF3B1-201ENST00000335508 SERHLQ9NQF3 203 aa6.47□□□□□ -1.37
SF3B1-201ENST00000335508 RIMS3Q9UJD0 308 aa6.47□□□□□ -1.37
SF3B1-201ENST00000335508 MED16Q9Y2X0 877 aa6.47□□□□□ -1.37
SF3B1-201ENST00000335508 NAALAD2Q9Y3Q0 740 aa6.47□□□□□ -1.37
SF3B1-201ENST00000335508 TCRBV3S1A0A5B6 114 aa6.47□□□□□ -1.37
SF3B1-201ENST00000335508 TAF4O00268 1085 aa6.47□□□□□ -1.37
SF3B1-201ENST00000335508 OR7A17O14581 309 aa6.47□□□□□ -1.37
SF3B1-201ENST00000335508 PAPLNO95428 1278 aa6.47□□□□□ -1.37
SF3B1-201ENST00000335508 CHRNB1P11230 501 aa6.47□□□□□ -1.37
SF3B1-201ENST00000335508 MAP2K6P52564 334 aa6.47□□□□□ -1.37
SF3B1-201ENST00000335508 RAB15P59190 212 aa6.47□□□□□ -1.37
SF3B1-201ENST00000335508 CD47Q08722 323 aa6.47□□□□□ -1.37
SF3B1-201ENST00000335508 TAB1Q15750 504 aa6.47□□□□□ -1.37
SF3B1-201ENST00000335508 MAMDC2Q7Z304 686 aaPredicted RBP6.47□□□□□ -1.37
SF3B1-201ENST00000335508 PAQR7Q86WK9 346 aa6.47□□□□□ -1.37
SF3B1-201ENST00000335508 MISPQ8IVT2 679 aa6.47□□□□□ -1.37
SF3B1-201ENST00000335508 GID4Q8IVV7 300 aa6.47□□□□□ -1.37
SF3B1-201ENST00000335508 MS4A6EQ96DS6 147 aa6.47□□□□□ -1.37
SF3B1-201ENST00000335508 CRELD1Q96HD1 420 aa6.47□□□□□ -1.37
SF3B1-201ENST00000335508 TUBB1Q9H4B7 451 aa6.47□□□□□ -1.37
SF3B1-201ENST00000335508 BCL2L10Q9HD36 194 aa6.47□□□□□ -1.37
SF3B1-201ENST00000335508 AMBNQ9NP70 447 aa6.47□□□□□ -1.37
SF3B1-201ENST00000335508 SLC23A2Q9UGH3 650 aa6.47□□□□□ -1.37
SF3B1-201ENST00000335508 FEZF1A0PJY2 475 aa6.47□□□□□ -1.37
SF3B1-201ENST00000335508 H0Y8X5 98 aa6.47□□□□□ -1.37
SF3B1-201ENST00000335508 FMO6PO60774 539 aa6.47□□□□□ -1.37
SF3B1-201ENST00000335508 NDUFB2O95178 105 aa6.47□□□□□ -1.37
SF3B1-201ENST00000335508 AHCYP23526 432 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms