RNA–Protein interactions for RNA: ENST00000311388.7

DEPDC7-202, Transcript of DEP domain containing 7, humanhuman

TSL 1 (best) BASIC

Gene DEPDC7, Length 2,012 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC7-202ENST00000311388 PMS2P3Q13401 168 aa14.92□□□□□ -0.02
DEPDC7-202ENST00000311388 PIN1Q13526 163 aaPredicted RBP14.92□□□□□ -0.02
DEPDC7-202ENST00000311388 MAD2L1BPQ15013 274 aaPredicted RBP14.92□□□□□ -0.02
DEPDC7-202ENST00000311388 EXOSC7Q15024 291 aaKnown RBP14.92□□□□□ -0.02
DEPDC7-202ENST00000311388 FRRS1Q6ZNA5 592 aa14.92□□□□□ -0.02
DEPDC7-202ENST00000311388 B3GNT8Q7Z7M8 397 aa14.92□□□□□ -0.02
DEPDC7-202ENST00000311388 AQP11Q8NBQ7 271 aa14.92□□□□□ -0.02
DEPDC7-202ENST00000311388 MAFAQ8NHW3 353 aaPredicted RBP14.92□□□□□ -0.02
DEPDC7-202ENST00000311388 ZNF675Q8TD23 568 aa14.92□□□□□ -0.02
DEPDC7-202ENST00000311388 ZNF566Q969W8 418 aa14.92□□□□□ -0.02
DEPDC7-202ENST00000311388 GTPBP3Q969Y2 492 aaKnown RBP14.92□□□□□ -0.02
DEPDC7-202ENST00000311388 CTHRC1Q96CG8 243 aa14.92□□□□□ -0.02
DEPDC7-202ENST00000311388 APOL4Q9BPW4 351 aa14.92□□□□□ -0.02
DEPDC7-202ENST00000311388 IER2Q9BTL4 223 aa14.92□□□□□ -0.02
DEPDC7-202ENST00000311388 SPRTNQ9H040 489 aaPredicted RBP14.92□□□□□ -0.02
DEPDC7-202ENST00000311388 ADAP2Q9NPF8 381 aa14.92□□□□□ -0.02
DEPDC7-202ENST00000311388 CALML5Q9NZT1 146 aa14.92□□□□□ -0.02
DEPDC7-202ENST00000311388 GPR55Q9Y2T6 319 aaPredicted RBP14.92□□□□□ -0.02
DEPDC7-202ENST00000311388 CSNK1G3Q9Y6M4 447 aa14.92□□□□□ -0.02
DEPDC7-202ENST00000311388 CASC3O15234 703 aaKnown RBP14.91□□□□□ -0.02
DEPDC7-202ENST00000311388 XPNPEP2O43895 674 aa14.91□□□□□ -0.02
DEPDC7-202ENST00000311388 ALPPP05187 535 aa14.91□□□□□ -0.02
DEPDC7-202ENST00000311388 H1F0P07305 194 aaKnown RBP14.91□□□□□ -0.02
DEPDC7-202ENST00000311388 FMO3P31513 532 aa14.91□□□□□ -0.02
DEPDC7-202ENST00000311388 GABARAPL2P60520 117 aa14.91□□□□□ -0.02
DEPDC7-202ENST00000311388 TOP3AQ13472 1001 aaPredicted RBP14.91□□□□□ -0.02
DEPDC7-202ENST00000311388 KCNAB1Q14722 419 aa14.91□□□□□ -0.02
DEPDC7-202ENST00000311388 NDUFA9Q16795 377 aa14.91□□□□□ -0.02
DEPDC7-202ENST00000311388 SYT16Q17RD7 645 aa14.91□□□□□ -0.02
DEPDC7-202ENST00000311388 ZNF311Q5JNZ3 666 aa14.91□□□□□ -0.02
DEPDC7-202ENST00000311388 FGD3Q5JSP0 725 aa14.91□□□□□ -0.02
DEPDC7-202ENST00000311388 MLIPQ5VWP3 458 aa14.91□□□□□ -0.02
DEPDC7-202ENST00000311388 TAGAPQ8N103 731 aa14.91□□□□□ -0.02
DEPDC7-202ENST00000311388 BPIFB6Q8NFQ5 453 aa14.91□□□□□ -0.02
DEPDC7-202ENST00000311388 ZDHHC12Q96GR4 267 aa14.91□□□□□ -0.02
DEPDC7-202ENST00000311388 PEX11GQ96HA9 241 aa14.91□□□□□ -0.02
DEPDC7-202ENST00000311388 CHRNA10Q9GZZ6 450 aa14.91□□□□□ -0.02
DEPDC7-202ENST00000311388 POLR1BQ9H9Y6 1135 aa14.91□□□□□ -0.02
DEPDC7-202ENST00000311388 PDE7BQ9NP56 450 aa14.91□□□□□ -0.02
DEPDC7-202ENST00000311388 TMEM184BQ9Y519 407 aaPredicted RBP14.91□□□□□ -0.02
DEPDC7-202ENST00000311388 NUDT21O43809 227 aaKnown RBP14.9□□□□□ -0.02
DEPDC7-202ENST00000311388 PCDHGA12O60330 932 aa14.9□□□□□ -0.02
DEPDC7-202ENST00000311388 NSA2O95478 260 aaKnown RBP14.9□□□□□ -0.02
DEPDC7-202ENST00000311388 ANGPTL1O95841 491 aa14.9□□□□□ -0.02
DEPDC7-202ENST00000311388 AGR2O95994 175 aa14.9□□□□□ -0.02
DEPDC7-202ENST00000311388 CCDC159P0C7I6 412 aa14.9□□□□□ -0.02
DEPDC7-202ENST00000311388 SLC35E2P0CK97 266 aa14.9□□□□□ -0.02
DEPDC7-202ENST00000311388 TDGF1P13385 188 aa14.9□□□□□ -0.02
DEPDC7-202ENST00000311388 RNH1P13489 461 aaKnown RBP14.9□□□□□ -0.02
DEPDC7-202ENST00000311388 GSTT1P30711 240 aa14.9□□□□□ -0.02
DEPDC7-202ENST00000311388 GGT2P36268 569 aa14.9□□□□□ -0.02
DEPDC7-202ENST00000311388 DUSP8Q13202 625 aa14.9□□□□□ -0.02
DEPDC7-202ENST00000311388 FAM53BQ14153 422 aa14.9□□□□□ -0.02
DEPDC7-202ENST00000311388 INAVAQ3KP66 663 aa14.9□□□□□ -0.02
DEPDC7-202ENST00000311388 ARHGAP11BQ3KRB8 267 aa14.9□□□□□ -0.02
DEPDC7-202ENST00000311388 BROXQ5VW32 411 aa14.9□□□□□ -0.02
DEPDC7-202ENST00000311388 TYW3Q6IPR3 259 aaKnown RBP14.9□□□□□ -0.02
DEPDC7-202ENST00000311388 ENTHD1Q8IYW4 607 aa14.9□□□□□ -0.02
DEPDC7-202ENST00000311388 NMD3Q96D46 503 aaKnown RBP14.9□□□□□ -0.02
DEPDC7-202ENST00000311388 TSC22D3Q99576 134 aa14.9□□□□□ -0.02
DEPDC7-202ENST00000311388 ARHGDIGQ99819 225 aa14.9□□□□□ -0.02
DEPDC7-202ENST00000311388 PIGUQ9H490 435 aa14.9□□□□□ -0.02
DEPDC7-202ENST00000311388 MAN2C1Q9NTJ4 1040 aa14.9□□□□□ -0.02
DEPDC7-202ENST00000311388 MKLN1Q9UL63 735 aa14.9□□□□□ -0.02
DEPDC7-202ENST00000311388 SLC9A8Q9Y2E8 581 aa14.9□□□□□ -0.02
DEPDC7-202ENST00000311388 TNRC6BQ9UPQ9 1833 aaKnown RBP14.9□□□□□ -0.02
DEPDC7-202ENST00000311388 CCDC160A6NGH7 325 aa14.9□□□□□ -0.02
DEPDC7-202ENST00000311388 HRO43593 1189 aa14.9□□□□□ -0.02
DEPDC7-202ENST00000311388 ABCB7O75027 752 aa14.9□□□□□ -0.02
DEPDC7-202ENST00000311388 WBP4O75554 376 aaKnown RBP14.9□□□□□ -0.02
DEPDC7-202ENST00000311388 MAP3K8P41279 467 aa14.9□□□□□ -0.02
DEPDC7-202ENST00000311388 DHPSP49366 369 aaPredicted RBP14.9□□□□□ -0.02
DEPDC7-202ENST00000311388 ERV3-1Q14264 604 aa14.9□□□□□ -0.02
DEPDC7-202ENST00000311388 SMN1Q16637 294 aaKnown RBP14.9□□□□□ -0.02
DEPDC7-202ENST00000311388 ZBED5Q49AG3 693 aa14.9□□□□□ -0.02
DEPDC7-202ENST00000311388 CCNJQ5T5M9 372 aa14.9□□□□□ -0.02
DEPDC7-202ENST00000311388 XAF1Q6GPH4 301 aa14.9□□□□□ -0.02
DEPDC7-202ENST00000311388 KLHL17Q6TDP4 642 aa14.9□□□□□ -0.02
DEPDC7-202ENST00000311388 APH1BQ8WW43 257 aa14.9□□□□□ -0.02
DEPDC7-202ENST00000311388 CD180Q99467 661 aa14.9□□□□□ -0.02
DEPDC7-202ENST00000311388 SDF2Q99470 211 aa14.9□□□□□ -0.02
DEPDC7-202ENST00000311388 PRR14Q9BWN1 585 aa14.9□□□□□ -0.02
DEPDC7-202ENST00000311388 RASSF1Q9NS23 344 aa14.9□□□□□ -0.02
DEPDC7-202ENST00000311388 TMEM9Q9P0T7 183 aa14.9□□□□□ -0.02
DEPDC7-202ENST00000311388 RNF6Q9Y252 685 aa14.9□□□□□ -0.02
DEPDC7-202ENST00000311388 CLDN16Q9Y5I7 305 aa14.9□□□□□ -0.02
DEPDC7-202ENST00000311388 CCDC163A0A0D9SF12 145 aa14.89□□□□□ -0.03
DEPDC7-202ENST00000311388 FITM1A5D6W6 292 aa14.89□□□□□ -0.03
DEPDC7-202ENST00000311388 OR2W5A6NFC9 320 aa14.89□□□□□ -0.03
DEPDC7-202ENST00000311388 H3BMH7 237 aa14.89□□□□□ -0.03
DEPDC7-202ENST00000311388 SYT5O00445 386 aa14.89□□□□□ -0.03
DEPDC7-202ENST00000311388 FRS3O43559 492 aa14.89□□□□□ -0.03
DEPDC7-202ENST00000311388 TPST2O60704 377 aa14.89□□□□□ -0.03
DEPDC7-202ENST00000311388 SLITRK5O94991 958 aa14.89□□□□□ -0.03
DEPDC7-202ENST00000311388 CPNE6O95741 557 aa14.89□□□□□ -0.03
DEPDC7-202ENST00000311388 CBX7O95931 251 aa14.89□□□□□ -0.03
DEPDC7-202ENST00000311388 IFI6P09912 130 aa14.89□□□□□ -0.03
DEPDC7-202ENST00000311388 S1PR1P21453 382 aa14.89□□□□□ -0.03
DEPDC7-202ENST00000311388 GSSP48637 474 aa14.89□□□□□ -0.03
DEPDC7-202ENST00000311388 NUP107P57740 925 aa14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms