RNA–Protein interactions for RNA: ENST00000309246.9

TPT1-201, Transcript of tumor protein, translationally-controlled 1, humanhuman

TSL 1 (best) BASIC

Gene TPT1, Length 1,008 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPT1-201ENST00000309246 NAGAP17050 411 aa11.08□□□□□ -0.64
TPT1-201ENST00000309246 CASQ1P31415 396 aa11.08□□□□□ -0.64
TPT1-201ENST00000309246 GCKP35557 465 aa11.08□□□□□ -0.64
TPT1-201ENST00000309246 DCAF7P61962 342 aa11.08□□□□□ -0.64
TPT1-201ENST00000309246 MAP4K2Q12851 820 aa11.08□□□□□ -0.64
TPT1-201ENST00000309246 IFT88Q13099 833 aa11.08□□□□□ -0.64
TPT1-201ENST00000309246 SLC30A6Q6NXT4 461 aa11.08□□□□□ -0.64
TPT1-201ENST00000309246 TMEM81Q6P7N7 255 aa11.08□□□□□ -0.64
TPT1-201ENST00000309246 Q71RC1 249 aaPredicted RBP11.08□□□□□ -0.64
TPT1-201ENST00000309246 NUP54Q7Z3B4 507 aa11.08□□□□□ -0.64
TPT1-201ENST00000309246 GCNT2Q8N0V5 402 aa11.08□□□□□ -0.64
TPT1-201ENST00000309246 OR4F6Q8NGB9 312 aa11.08□□□□□ -0.64
TPT1-201ENST00000309246 OR14L1PQ8NHC6 308 aa11.08□□□□□ -0.64
TPT1-201ENST00000309246 ZPLD1Q8TCW7 415 aa11.08□□□□□ -0.64
TPT1-201ENST00000309246 INTS12Q96CB8 462 aaKnown RBP11.08□□□□□ -0.64
TPT1-201ENST00000309246 KLHL29Q96CT2 875 aa11.08□□□□□ -0.64
TPT1-201ENST00000309246 LCORQ96JN0 433 aaPredicted RBP11.08□□□□□ -0.64
TPT1-201ENST00000309246 SMR3AQ99954 134 aa11.08□□□□□ -0.64
TPT1-201ENST00000309246 NTMT1Q9BV86 223 aa11.08□□□□□ -0.64
TPT1-201ENST00000309246 OR2B2Q9GZK3 357 aa11.08□□□□□ -0.64
TPT1-201ENST00000309246 ELOVL6Q9H5J4 265 aa11.08□□□□□ -0.64
TPT1-201ENST00000309246 FARSBQ9NSD9 589 aaKnown RBP11.08□□□□□ -0.64
TPT1-201ENST00000309246 AHSPQ9NZD4 102 aa11.08□□□□□ -0.64
TPT1-201ENST00000309246 XPR1Q9UBH6 696 aa11.08□□□□□ -0.64
TPT1-201ENST00000309246 ZNF639Q9UID6 485 aa11.08□□□□□ -0.64
TPT1-201ENST00000309246 SLC12A4Q9UP95 1085 aa11.08□□□□□ -0.64
TPT1-201ENST00000309246 CFL2Q9Y281 166 aa11.08□□□□□ -0.64
TPT1-201ENST00000309246 PLLPQ9Y342 182 aa11.08□□□□□ -0.64
TPT1-201ENST00000309246 FLNAP21333 2647 aaKnown RBP11.07□□□□□ -0.64
TPT1-201ENST00000309246 STX16-NPEPL1H3BU86 382 aa11.07□□□□□ -0.64
TPT1-201ENST00000309246 STX16O14662 325 aa11.07□□□□□ -0.64
TPT1-201ENST00000309246 GUCY1B2O75343 617 aa11.07□□□□□ -0.64
TPT1-201ENST00000309246 PDYNP01213 254 aa11.07□□□□□ -0.64
TPT1-201ENST00000309246 HRGP04196 525 aa11.07□□□□□ -0.64
TPT1-201ENST00000309246 ATP1B1P05026 303 aa11.07□□□□□ -0.64
TPT1-201ENST00000309246 RHOXF2BP0C7M4 288 aa11.07□□□□□ -0.64
TPT1-201ENST00000309246 CPN1P15169 458 aa11.07□□□□□ -0.64
TPT1-201ENST00000309246 PCSK2P16519 638 aa11.07□□□□□ -0.64
TPT1-201ENST00000309246 CSNK2A2P19784 350 aaPredicted RBP11.07□□□□□ -0.64
TPT1-201ENST00000309246 CPA2P48052 419 aa11.07□□□□□ -0.64
TPT1-201ENST00000309246 ALDH9A1P49189 494 aa11.07□□□□□ -0.64
TPT1-201ENST00000309246 STARP49675 285 aa11.07□□□□□ -0.64
TPT1-201ENST00000309246 MRPS35P82673 323 aaKnown RBP11.07□□□□□ -0.64
TPT1-201ENST00000309246 SLC7A5Q01650 507 aa11.07□□□□□ -0.64
TPT1-201ENST00000309246 GALNT1Q10472 559 aaPredicted RBP11.07□□□□□ -0.64
TPT1-201ENST00000309246 GGTA1PQ4G0N0 100 aa11.07□□□□□ -0.64
TPT1-201ENST00000309246 TRMT12Q53H54 448 aaKnown RBP11.07□□□□□ -0.64
TPT1-201ENST00000309246 ENPP6Q6UWR7 440 aa11.07□□□□□ -0.64
TPT1-201ENST00000309246 MILR1Q7Z6M3 343 aa11.07□□□□□ -0.64
TPT1-201ENST00000309246 TRIM42Q8IWZ5 723 aa11.07□□□□□ -0.64
TPT1-201ENST00000309246 WDSUB1Q8N9V3 476 aa11.07□□□□□ -0.64
TPT1-201ENST00000309246 OR52R1Q8NGF1 315 aa11.07□□□□□ -0.64
TPT1-201ENST00000309246 TM4SF18Q96CE8 201 aa11.07□□□□□ -0.64
TPT1-201ENST00000309246 G6PC3Q9BUM1 346 aa11.07□□□□□ -0.64
TPT1-201ENST00000309246 SFXN3Q9BWM7 321 aa11.07□□□□□ -0.64
TPT1-201ENST00000309246 EXO1Q9UQ84 846 aaKnown RBP11.07□□□□□ -0.64
TPT1-201ENST00000309246 SH3D21A4FU49 640 aa11.06□□□□□ -0.64
TPT1-201ENST00000309246 PPP6CO00743 305 aa11.06□□□□□ -0.64
TPT1-201ENST00000309246 ACOX3O15254 700 aa11.06□□□□□ -0.64
TPT1-201ENST00000309246 SMIM24O75264 130 aa11.06□□□□□ -0.64
TPT1-201ENST00000309246 NME6O75414 186 aaPredicted RBP11.06□□□□□ -0.64
TPT1-201ENST00000309246 REM1O75628 298 aa11.06□□□□□ -0.64
TPT1-201ENST00000309246 CBR3O75828 277 aa11.06□□□□□ -0.64
TPT1-201ENST00000309246 RCBTB2O95199 551 aa11.06□□□□□ -0.64
TPT1-201ENST00000309246 GOSR1O95249 250 aa11.06□□□□□ -0.64
TPT1-201ENST00000309246 RPS17P08708 135 aaKnown RBP11.06□□□□□ -0.64
TPT1-201ENST00000309246 RBP1P09455 135 aa11.06□□□□□ -0.64
TPT1-201ENST00000309246 TSPAN8P19075 237 aa11.06□□□□□ -0.64
TPT1-201ENST00000309246 CD53P19397 219 aa11.06□□□□□ -0.64
TPT1-201ENST00000309246 TCEA1P23193 301 aaKnown RBP11.06□□□□□ -0.64
TPT1-201ENST00000309246 EMDP50402 254 aa11.06□□□□□ -0.64
TPT1-201ENST00000309246 CDH13P55290 713 aa11.06□□□□□ -0.64
TPT1-201ENST00000309246 ETF1P62495 437 aaKnown RBP11.06□□□□□ -0.64
TPT1-201ENST00000309246 GUCA2AQ02747 115 aa11.06□□□□□ -0.64
TPT1-201ENST00000309246 LTBQ06643 244 aa11.06□□□□□ -0.64
TPT1-201ENST00000309246 SNTA1Q13424 505 aa11.06□□□□□ -0.64
TPT1-201ENST00000309246 C10orf62Q5T681 223 aaPredicted RBP11.06□□□□□ -0.64
TPT1-201ENST00000309246 LETMD1Q6P1Q0 360 aa11.06□□□□□ -0.64
TPT1-201ENST00000309246 ADGRE4PQ86SQ3 457 aa11.06□□□□□ -0.64
TPT1-201ENST00000309246 IFNEQ86WN2 208 aa11.06□□□□□ -0.64
TPT1-201ENST00000309246 KRTAP1-3Q8IUG1 177 aa11.06□□□□□ -0.64
TPT1-201ENST00000309246 C1orf52Q8N6N3 182 aaKnown RBP11.06□□□□□ -0.64
TPT1-201ENST00000309246 KIF18AQ8NI77 898 aa11.06□□□□□ -0.64
TPT1-201ENST00000309246 TRPC4APQ8TEL6 797 aa11.06□□□□□ -0.64
TPT1-201ENST00000309246 SELENOMQ8WWX9 145 aa11.06□□□□□ -0.64
TPT1-201ENST00000309246 TMBIM1Q969X1 311 aa11.06□□□□□ -0.64
TPT1-201ENST00000309246 CTHRC1Q96CG8 243 aa11.06□□□□□ -0.64
TPT1-201ENST00000309246 CNRIP1Q96F85 164 aaPredicted RBP11.06□□□□□ -0.64
TPT1-201ENST00000309246 ZFP3Q96NJ6 502 aa11.06□□□□□ -0.64
TPT1-201ENST00000309246 DACH2Q96NX9 599 aa11.06□□□□□ -0.64
TPT1-201ENST00000309246 HBEGFQ99075 208 aa11.06□□□□□ -0.64
TPT1-201ENST00000309246 TM9SF2Q99805 663 aa11.06□□□□□ -0.64
TPT1-201ENST00000309246 USB1Q9BQ65 265 aaKnown RBP11.06□□□□□ -0.64
TPT1-201ENST00000309246 ACSS3Q9H6R3 686 aa11.06□□□□□ -0.64
TPT1-201ENST00000309246 ANKRA2Q9H9E1 313 aa11.06□□□□□ -0.64
TPT1-201ENST00000309246 NEUROD4Q9HD90 331 aa11.06□□□□□ -0.64
TPT1-201ENST00000309246 ZDHHC18Q9NUE0 388 aa11.06□□□□□ -0.64
TPT1-201ENST00000309246 NINJ2Q9NZG7 142 aa11.06□□□□□ -0.64
TPT1-201ENST00000309246 CLCF1Q9UBD9 225 aa11.06□□□□□ -0.64
TPT1-201ENST00000309246 FBXL2Q9UKC9 423 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms