RNA–Protein interactions for RNA: ENST00000302085.8

SMAD1-201, Transcript of SMAD family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD1, Length 1,966 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-201ENST00000302085 LAIR2Q6ISS4 152 aa20.82■□□□□ 0.92
SMAD1-201ENST00000302085 CHDHQ8NE62 594 aaPredicted RBP20.82■□□□□ 0.92
SMAD1-201ENST00000302085 ALPK1Q96QP1 1244 aa20.82■□□□□ 0.92
SMAD1-201ENST00000302085 PINK1Q9BXM7 581 aa20.82■□□□□ 0.92
SMAD1-201ENST00000302085 TRIM64CA6NLI5 447 aa20.81■□□□□ 0.92
SMAD1-201ENST00000302085 CCNB2O95067 398 aa20.81■□□□□ 0.92
SMAD1-201ENST00000302085 ANXA8P13928 327 aa20.81■□□□□ 0.92
SMAD1-201ENST00000302085 RYKP34925 604 aa20.81■□□□□ 0.92
SMAD1-201ENST00000302085 AVPR1BP47901 424 aa20.81■□□□□ 0.92
SMAD1-201ENST00000302085 EMP3P54852 163 aa20.81■□□□□ 0.92
SMAD1-201ENST00000302085 TUBA4AP68366 448 aa20.81■□□□□ 0.92
SMAD1-201ENST00000302085 BTG2P78543 158 aa20.81■□□□□ 0.92
SMAD1-201ENST00000302085 SLC13A2Q13183 592 aa20.81■□□□□ 0.92
SMAD1-201ENST00000302085 HLA-BQ31612 363 aa20.81■□□□□ 0.92
SMAD1-201ENST00000302085 ARHGAP11BQ3KRB8 267 aa20.81■□□□□ 0.92
SMAD1-201ENST00000302085 NADK2Q4G0N4 442 aa20.81■□□□□ 0.92
SMAD1-201ENST00000302085 COLEC12Q5KU26 742 aa20.81■□□□□ 0.92
SMAD1-201ENST00000302085 MLIPQ5VWP3 458 aa20.81■□□□□ 0.92
SMAD1-201ENST00000302085 ZNF595Q8IYB9 648 aa20.81■□□□□ 0.92
SMAD1-201ENST00000302085 OR9Q2Q8NGE9 314 aa20.81■□□□□ 0.92
SMAD1-201ENST00000302085 PHF10Q8WUB8 498 aaKnown RBP20.81■□□□□ 0.92
SMAD1-201ENST00000302085 CCDC74AQ96AQ1 378 aa20.81■□□□□ 0.92
SMAD1-201ENST00000302085 DHRS1Q96LJ7 313 aa20.81■□□□□ 0.92
SMAD1-201ENST00000302085 PIGUQ9H490 435 aa20.81■□□□□ 0.92
SMAD1-201ENST00000302085 ACAD8Q9UKU7 415 aa20.81■□□□□ 0.92
SMAD1-201ENST00000302085 CLDN16Q9Y5I7 305 aa20.81■□□□□ 0.92
SMAD1-201ENST00000302085 MN1Q10571 1320 aaPredicted RBP20.81■□□□□ 0.92
SMAD1-201ENST00000302085 TECTAO75443 2155 aa20.81■□□□□ 0.92
SMAD1-201ENST00000302085 COL6A3P12111 3177 aa20.81■□□□□ 0.92
SMAD1-201ENST00000302085 OR2W5A6NFC9 320 aa20.81■□□□□ 0.92
SMAD1-201ENST00000302085 CDC123O75794 336 aaPredicted RBP20.81■□□□□ 0.92
SMAD1-201ENST00000302085 ALPPP05187 535 aa20.81■□□□□ 0.92
SMAD1-201ENST00000302085 MAP4K2Q12851 820 aa20.81■□□□□ 0.92
SMAD1-201ENST00000302085 NPRL3Q12980 569 aa20.81■□□□□ 0.92
SMAD1-201ENST00000302085 ZNF311Q5JNZ3 666 aa20.81■□□□□ 0.92
SMAD1-201ENST00000302085 FRRS1Q6ZNA5 592 aa20.81■□□□□ 0.92
SMAD1-201ENST00000302085 VRK2Q86Y07 508 aa20.81■□□□□ 0.92
SMAD1-201ENST00000302085 D2HGDHQ8N465 521 aa20.81■□□□□ 0.92
SMAD1-201ENST00000302085 SAP25Q8TEE9 199 aa20.81■□□□□ 0.92
SMAD1-201ENST00000302085 FBLIM1Q8WUP2 373 aa20.81■□□□□ 0.92
SMAD1-201ENST00000302085 NIPSNAP1Q9BPW8 284 aa20.81■□□□□ 0.92
SMAD1-201ENST00000302085 PSD2Q9BQI7 771 aa20.81■□□□□ 0.92
SMAD1-201ENST00000302085 ENAMQ9NRM1 1142 aa20.81■□□□□ 0.92
SMAD1-201ENST00000302085 TUBA8Q9NY65 449 aaPredicted RBP20.81■□□□□ 0.92
SMAD1-201ENST00000302085 NDRG4Q9ULP0 352 aaKnown RBP20.81■□□□□ 0.92
SMAD1-201ENST00000302085 HCN4Q9Y3Q4 1203 aa20.81■□□□□ 0.92
SMAD1-201ENST00000302085 A0A087WXM4 84 aa20.8■□□□□ 0.92
SMAD1-201ENST00000302085 TRBV4-1A0A0J9YWV2 114 aa20.8■□□□□ 0.92
SMAD1-201ENST00000302085 A8MU76 341 aa20.8■□□□□ 0.92
SMAD1-201ENST00000302085 TMEM150CB9EJG8 249 aa20.8■□□□□ 0.92
SMAD1-201ENST00000302085 OR10H2O60403 315 aa20.8■□□□□ 0.92
SMAD1-201ENST00000302085 OR2B3O76000 313 aa20.8■□□□□ 0.92
SMAD1-201ENST00000302085 BMP10O95393 424 aa20.8■□□□□ 0.92
SMAD1-201ENST00000302085 IL7RP16871 459 aa20.8■□□□□ 0.92
SMAD1-201ENST00000302085 S1PR1P21453 382 aa20.8■□□□□ 0.92
SMAD1-201ENST00000302085 PI4KAP42356 2102 aa20.8■□□□□ 0.92
SMAD1-201ENST00000302085 ARL4DP49703 201 aa20.8■□□□□ 0.92
SMAD1-201ENST00000302085 IGLV3-21P80748 117 aaPredicted RBP20.8■□□□□ 0.92
SMAD1-201ENST00000302085 DUSP8Q13202 625 aa20.8■□□□□ 0.92
SMAD1-201ENST00000302085 KEAP1Q14145 624 aa20.8■□□□□ 0.92
SMAD1-201ENST00000302085 C6orf141Q5SZD1 244 aa20.8■□□□□ 0.92
SMAD1-201ENST00000302085 WDR74Q6RFH5 385 aaPredicted RBP20.8■□□□□ 0.92
SMAD1-201ENST00000302085 OR6T1Q8NGN1 323 aa20.8■□□□□ 0.92
SMAD1-201ENST00000302085 OR51Q1Q8NH59 317 aa20.8■□□□□ 0.92
SMAD1-201ENST00000302085 ADAMTS18Q8TE60 1221 aa20.8■□□□□ 0.92
SMAD1-201ENST00000302085 HDAC2Q92769 488 aaKnown RBP20.8■□□□□ 0.92
SMAD1-201ENST00000302085 SLC41A2Q96JW4 573 aa20.8■□□□□ 0.92
SMAD1-201ENST00000302085 SDF2Q99470 211 aa20.8■□□□□ 0.92
SMAD1-201ENST00000302085 GABARAPL3Q9BY60 117 aa20.8■□□□□ 0.92
SMAD1-201ENST00000302085 CXorf21Q9HAI6 301 aa20.8■□□□□ 0.92
SMAD1-201ENST00000302085 PRTFDC1Q9NRG1 225 aa20.8■□□□□ 0.92
SMAD1-201ENST00000302085 MKLN1Q9UL63 735 aa20.8■□□□□ 0.92
SMAD1-201ENST00000302085 MRPS33Q9Y291 106 aaKnown RBP20.8■□□□□ 0.92
SMAD1-201ENST00000302085 CHST2Q9Y4C5 530 aa20.8■□□□□ 0.92
SMAD1-201ENST00000302085 BLACEA4D250 179 aa20.79■□□□□ 0.92
SMAD1-201ENST00000302085 H0YIG0 161 aa20.79■□□□□ 0.92
SMAD1-201ENST00000302085 OR6B1O95007 311 aa20.79■□□□□ 0.92
SMAD1-201ENST00000302085 CBX7O95931 251 aa20.79■□□□□ 0.92
SMAD1-201ENST00000302085 ALOX5P09917 674 aa20.79■□□□□ 0.92
SMAD1-201ENST00000302085 MAP3K8P41279 467 aa20.79■□□□□ 0.92
SMAD1-201ENST00000302085 RPP38P78345 283 aaKnown RBP20.79■□□□□ 0.92
SMAD1-201ENST00000302085 STX4Q12846 297 aa20.79■□□□□ 0.92
SMAD1-201ENST00000302085 ZNF770Q6IQ21 691 aaPredicted RBP20.79■□□□□ 0.92
SMAD1-201ENST00000302085 ZCCHC12Q6PEW1 402 aa20.79■□□□□ 0.92
SMAD1-201ENST00000302085 CDRT4Q8N9R6 151 aa20.79■□□□□ 0.92
SMAD1-201ENST00000302085 ALOXE3Q9BYJ1 711 aa20.79■□□□□ 0.92
SMAD1-201ENST00000302085 MTHFD2LQ9H903 347 aaPredicted RBP20.79■□□□□ 0.92
SMAD1-201ENST00000302085 PAPOLBQ9NRJ5 636 aaKnown RBP20.79■□□□□ 0.92
SMAD1-201ENST00000302085 CUTCQ9NTM9 273 aa20.79■□□□□ 0.92
SMAD1-201ENST00000302085 A4GNTQ9UNA3 340 aa20.79■□□□□ 0.92
SMAD1-201ENST00000302085 SLC9A8Q9Y2E8 581 aa20.79■□□□□ 0.92
SMAD1-201ENST00000302085 GMPPBQ9Y5P6 360 aa20.79■□□□□ 0.92
SMAD1-201ENST00000302085 LY6G6EA0A0G2JKS1 128 aa20.79■□□□□ 0.92
SMAD1-201ENST00000302085 H1F0P07305 194 aaKnown RBP20.79■□□□□ 0.92
SMAD1-201ENST00000302085 FOLR1P15328 257 aa20.79■□□□□ 0.92
SMAD1-201ENST00000302085 CBLP22681 906 aa20.79■□□□□ 0.92
SMAD1-201ENST00000302085 ALDH3B2P48448 385 aa20.79■□□□□ 0.92
SMAD1-201ENST00000302085 PIN1Q13526 163 aaPredicted RBP20.79■□□□□ 0.92
SMAD1-201ENST00000302085 NPTX1Q15818 432 aa20.79■□□□□ 0.92
SMAD1-201ENST00000302085 CCNJQ5T5M9 372 aa20.79■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms