RNA–Protein interactions for RNA: ENST00000301873.9

LTBP3-201, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LTBP3, Length 4,443 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-201ENST00000301873 ZIC5Q96T25 663 aa19.71■□□□□ 0.75
LTBP3-201ENST00000301873 DEFB126Q9BYW3 111 aa19.71■□□□□ 0.75
LTBP3-201ENST00000301873 BRF2Q9HAW0 419 aa19.71■□□□□ 0.75
LTBP3-201ENST00000301873 KLF15Q9UIH9 416 aa19.71■□□□□ 0.75
LTBP3-201ENST00000301873 HCFC2Q9Y5Z7 792 aa19.71■□□□□ 0.75
LTBP3-201ENST00000301873 GVINP1Q7Z2Y8 2422 aa19.7■□□□□ 0.74
LTBP3-201ENST00000301873 A0A0G2JPF8 293 aa19.7■□□□□ 0.74
LTBP3-201ENST00000301873 ISPDA4D126 451 aa19.7■□□□□ 0.74
LTBP3-201ENST00000301873 HNRNPCL3B7ZW38 293 aa19.7■□□□□ 0.74
LTBP3-201ENST00000301873 NUDT7P0C024 238 aa19.7■□□□□ 0.74
LTBP3-201ENST00000301873 HNRNPCL4P0DMR1 293 aa19.7■□□□□ 0.74
LTBP3-201ENST00000301873 RBM34P42696 430 aaKnown RBP19.7■□□□□ 0.74
LTBP3-201ENST00000301873 C1orf189Q5VU69 101 aa19.7■□□□□ 0.74
LTBP3-201ENST00000301873 KCTD9Q7L273 389 aa19.7■□□□□ 0.74
LTBP3-201ENST00000301873 WDR53Q7Z5U6 358 aaPredicted RBP19.7■□□□□ 0.74
LTBP3-201ENST00000301873 LILRA2Q8N149 483 aa19.7■□□□□ 0.74
LTBP3-201ENST00000301873 PAPD5Q8NDF8 572 aaKnown RBP19.7■□□□□ 0.74
LTBP3-201ENST00000301873 GPR34Q9UPC5 381 aa19.7■□□□□ 0.74
LTBP3-201ENST00000301873 CDC40O60508 579 aaKnown RBP eCLIP19.7■□□□□ 0.74
LTBP3-201ENST00000301873 RBBP9O75884 186 aa19.7■□□□□ 0.74
LTBP3-201ENST00000301873 SEMA4FO95754 770 aa19.7■□□□□ 0.74
LTBP3-201ENST00000301873 TFAP2AP05549 437 aa19.7■□□□□ 0.74
LTBP3-201ENST00000301873 GPR143P51810 404 aa19.7■□□□□ 0.74
LTBP3-201ENST00000301873 MAVSQ7Z434 540 aa19.7■□□□□ 0.74
LTBP3-201ENST00000301873 ACOT4Q8N9L9 421 aa19.7■□□□□ 0.74
LTBP3-201ENST00000301873 OR9A2Q8NGT5 310 aa19.7■□□□□ 0.74
LTBP3-201ENST00000301873 CPEB1Q9BZB8 566 aaKnown RBP19.7■□□□□ 0.74
LTBP3-201ENST00000301873 VNN3Q9NY84 501 aa19.7■□□□□ 0.74
LTBP3-201ENST00000301873 RDH8Q9NYR8 311 aa19.7■□□□□ 0.74
LTBP3-201ENST00000301873 NLKQ9UBE8 527 aa19.7■□□□□ 0.74
LTBP3-201ENST00000301873 TIAM2Q8IVF5 1701 aa19.7■□□□□ 0.74
LTBP3-201ENST00000301873 PXNP49023 591 aaPredicted RBP19.7■□□□□ 0.74
LTBP3-201ENST00000301873 ZNF33BQ06732 778 aa19.7■□□□□ 0.74
LTBP3-201ENST00000301873 SEMA3BQ13214 749 aa19.7■□□□□ 0.74
LTBP3-201ENST00000301873 NSDHLQ15738 373 aa19.7■□□□□ 0.74
LTBP3-201ENST00000301873 HS6ST2Q96MM7 605 aa19.7■□□□□ 0.74
LTBP3-201ENST00000301873 ZFYVE21Q9BQ24 234 aa19.7■□□□□ 0.74
LTBP3-201ENST00000301873 ACTRT3Q9BYD9 372 aa19.7■□□□□ 0.74
LTBP3-201ENST00000301873 TBCCD1Q9NVR7 557 aa19.7■□□□□ 0.74
LTBP3-201ENST00000301873 C12orf71A8MTZ7 269 aa19.69■□□□□ 0.74
LTBP3-201ENST00000301873 PSMB5P28074 263 aa19.69■□□□□ 0.74
LTBP3-201ENST00000301873 PSMA6P60900 246 aaKnown RBP19.69■□□□□ 0.74
LTBP3-201ENST00000301873 DEFA5Q01523 94 aa19.69■□□□□ 0.74
LTBP3-201ENST00000301873 SMN1Q16637 294 aaKnown RBP19.69■□□□□ 0.74
LTBP3-201ENST00000301873 LRRC37A5PQ49AS3 106 aa19.69■□□□□ 0.74
LTBP3-201ENST00000301873 WDR45BQ5MNZ6 344 aa19.69■□□□□ 0.74
LTBP3-201ENST00000301873 SERPINA11Q86U17 422 aa19.69■□□□□ 0.74
LTBP3-201ENST00000301873 ZNF283Q8N7M2 679 aa19.69■□□□□ 0.74
LTBP3-201ENST00000301873 RASGEF1AQ8N9B8 481 aa19.69■□□□□ 0.74
LTBP3-201ENST00000301873 CLEC4EQ9ULY5 219 aa19.69■□□□□ 0.74
LTBP3-201ENST00000301873 ITGB7P26010 798 aa19.69■□□□□ 0.74
LTBP3-201ENST00000301873 HBA1P69905 142 aa19.69■□□□□ 0.74
LTBP3-201ENST00000301873 C6orf132Q5T0Z8 1188 aa19.69■□□□□ 0.74
LTBP3-201ENST00000301873 METTL2BQ6P1Q9 378 aaKnown RBP19.69■□□□□ 0.74
LTBP3-201ENST00000301873 ANKK1Q8NFD2 765 aa19.69■□□□□ 0.74
LTBP3-201ENST00000301873 SAMD11Q96NU1 681 aa19.69■□□□□ 0.74
LTBP3-201ENST00000301873 DPH1Q9BZG8 443 aa19.69■□□□□ 0.74
LTBP3-201ENST00000301873 STUB1Q9UNE7 303 aa19.69■□□□□ 0.74
LTBP3-201ENST00000301873 TEX13DA0A0J9YY54 714 aaPredicted RBP19.69■□□□□ 0.74
LTBP3-201ENST00000301873 KANTRA0A1W2PQU2 76 aa19.69■□□□□ 0.74
LTBP3-201ENST00000301873 PEX12O00623 359 aa19.69■□□□□ 0.74
LTBP3-201ENST00000301873 CLUP10909 449 aa19.69■□□□□ 0.74
LTBP3-201ENST00000301873 DDCP20711 480 aa19.69■□□□□ 0.74
LTBP3-201ENST00000301873 ACTC1P68032 377 aa19.69■□□□□ 0.74
LTBP3-201ENST00000301873 ACTA1P68133 377 aa19.69■□□□□ 0.74
LTBP3-201ENST00000301873 PLGLB1Q02325 96 aa19.69■□□□□ 0.74
LTBP3-201ENST00000301873 RPL13AP3Q6NVV1 102 aa19.69■□□□□ 0.74
LTBP3-201ENST00000301873 POGLUT1Q8NBL1 392 aa19.69■□□□□ 0.74
LTBP3-201ENST00000301873 LKAAEAR1Q8TD35 194 aa19.69■□□□□ 0.74
LTBP3-201ENST00000301873 TRIM43Q96BQ3 446 aaPredicted RBP19.69■□□□□ 0.74
LTBP3-201ENST00000301873 NPLQ9BXD5 320 aaPredicted RBP19.69■□□□□ 0.74
LTBP3-201ENST00000301873 C19orf25Q9UFG5 118 aaPredicted RBP19.69■□□□□ 0.74
LTBP3-201ENST00000301873 SH3D21A4FU49 640 aa19.69■□□□□ 0.74
LTBP3-201ENST00000301873 TRAPPC13A5PLN9 417 aa19.69■□□□□ 0.74
LTBP3-201ENST00000301873 FAM171A2A8MVW0 826 aa19.69■□□□□ 0.74
LTBP3-201ENST00000301873 H3BQ06 376 aaPredicted RBP19.69■□□□□ 0.74
LTBP3-201ENST00000301873 RNASET2O00584 256 aaKnown RBP19.69■□□□□ 0.74
LTBP3-201ENST00000301873 JRKO75564 520 aa19.69■□□□□ 0.74
LTBP3-201ENST00000301873 MR1Q95460 341 aa19.69■□□□□ 0.74
LTBP3-201ENST00000301873 OR51E2Q9H255 320 aa19.69■□□□□ 0.74
LTBP3-201ENST00000301873 GORASP2Q9H8Y8 452 aa19.69■□□□□ 0.74
LTBP3-201ENST00000301873 MRPL15Q9P015 296 aaKnown RBP19.69■□□□□ 0.74
LTBP3-201ENST00000301873 GSKIPQ9P0R6 139 aa19.69■□□□□ 0.74
LTBP3-201ENST00000301873 SCP2D1Q9UJQ7 156 aa19.69■□□□□ 0.74
LTBP3-201ENST00000301873 A0A1W2PPL8 197 aa19.68■□□□□ 0.74
LTBP3-201ENST00000301873 PCDH17O14917 1159 aa19.68■□□□□ 0.74
LTBP3-201ENST00000301873 CASRP41180 1078 aa19.68■□□□□ 0.74
LTBP3-201ENST00000301873 SLC6A11P48066 632 aa19.68■□□□□ 0.74
LTBP3-201ENST00000301873 SGSHP51688 502 aa19.68■□□□□ 0.74
LTBP3-201ENST00000301873 GNG2P59768 71 aa19.68■□□□□ 0.74
LTBP3-201ENST00000301873 E2F1Q01094 437 aa19.68■□□□□ 0.74
LTBP3-201ENST00000301873 SNTA1Q13424 505 aa19.68■□□□□ 0.74
LTBP3-201ENST00000301873 THOC7Q6I9Y2 204 aaKnown RBP19.68■□□□□ 0.74
LTBP3-201ENST00000301873 SPNS2Q8IVW8 549 aa19.68■□□□□ 0.74
LTBP3-201ENST00000301873 CCDC54Q8NEL0 328 aa19.68■□□□□ 0.74
LTBP3-201ENST00000301873 THAP6Q8TBB0 222 aa19.68■□□□□ 0.74
LTBP3-201ENST00000301873 SLC41A3Q96GZ6 507 aa19.68■□□□□ 0.74
LTBP3-201ENST00000301873 WDR77Q9BQA1 342 aaPredicted RBP19.68■□□□□ 0.74
LTBP3-201ENST00000301873 INTS6Q9UL03 887 aaKnown RBP19.68■□□□□ 0.74
LTBP3-201ENST00000301873 ABCG2Q9UNQ0 655 aa19.68■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms