RNA–Protein interactions for RNA: ENST00000226574.8

NFKB1-201, Transcript of nuclear factor kappa B subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NFKB1, Length 4,085 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-201ENST00000226574 RDH14Q9HBH5 336 aa13.03□□□□□ -0.32
NFKB1-201ENST00000226574 THSD1Q9NS62 852 aa13.03□□□□□ -0.32
NFKB1-201ENST00000226574 EXOSC1Q9Y3B2 195 aaKnown RBP13.03□□□□□ -0.32
NFKB1-201ENST00000226574 AK6Q9Y3D8 172 aaKnown RBP13.03□□□□□ -0.32
NFKB1-201ENST00000226574 PCDHGA2Q9Y5H1 932 aa13.03□□□□□ -0.32
NFKB1-201ENST00000226574 SH3D21A4FU49 640 aa13.02□□□□□ -0.32
NFKB1-201ENST00000226574 FKTNO75072 461 aa13.02□□□□□ -0.32
NFKB1-201ENST00000226574 TRIM3O75382 744 aaPredicted RBP13.02□□□□□ -0.32
NFKB1-201ENST00000226574 IL1RNP18510 177 aa13.02□□□□□ -0.32
NFKB1-201ENST00000226574 MC3RP41968 323 aa13.02□□□□□ -0.32
NFKB1-201ENST00000226574 SUOXP51687 545 aa13.02□□□□□ -0.32
NFKB1-201ENST00000226574 CTF1Q16619 201 aa13.02□□□□□ -0.32
NFKB1-201ENST00000226574 FLYWCH1Q4VC44 716 aa13.02□□□□□ -0.32
NFKB1-201ENST00000226574 PIP5KL1Q5T9C9 394 aa13.02□□□□□ -0.32
NFKB1-201ENST00000226574 ZNF782Q6ZMW2 699 aaPredicted RBP13.02□□□□□ -0.32
NFKB1-201ENST00000226574 SLC44A3Q8N4M1 653 aa13.02□□□□□ -0.32
NFKB1-201ENST00000226574 DPF3Q92784 378 aa13.02□□□□□ -0.32
NFKB1-201ENST00000226574 TREX2Q9BQ50 279 aaPredicted RBP13.02□□□□□ -0.32
NFKB1-201ENST00000226574 HCN3Q9P1Z3 774 aa13.02□□□□□ -0.32
NFKB1-201ENST00000226574 DOCK5Q9H7D0 1870 aa13.02□□□□□ -0.32
NFKB1-201ENST00000226574 SULT1C4O75897 302 aa13.02□□□□□ -0.33
NFKB1-201ENST00000226574 IMPA1P29218 277 aa13.02□□□□□ -0.33
NFKB1-201ENST00000226574 CTBP2P56545 445 aa13.02□□□□□ -0.33
NFKB1-201ENST00000226574 ADAM8P78325 824 aa13.02□□□□□ -0.33
NFKB1-201ENST00000226574 ILF3Q12906 894 aaKnown RBP eCLIP13.02□□□□□ -0.33
NFKB1-201ENST00000226574 FAM205BPQ63HN1 556 aa13.02□□□□□ -0.33
NFKB1-201ENST00000226574 RPTNQ6XPR3 784 aa13.02□□□□□ -0.33
NFKB1-201ENST00000226574 ZNF783Q6ZMS7 281 aa13.02□□□□□ -0.33
NFKB1-201ENST00000226574 BHLHA9Q7RTU4 235 aa13.02□□□□□ -0.33
NFKB1-201ENST00000226574 KLHDC8AQ8IYD2 350 aa13.02□□□□□ -0.33
NFKB1-201ENST00000226574 PROKR2Q8NFJ6 384 aa13.02□□□□□ -0.33
NFKB1-201ENST00000226574 LILRB4Q8NHJ6 448 aa13.02□□□□□ -0.33
NFKB1-201ENST00000226574 TRIB3Q96RU7 358 aa13.02□□□□□ -0.33
NFKB1-201ENST00000226574 FARSAQ9Y285 508 aaKnown RBP13.02□□□□□ -0.33
NFKB1-201ENST00000226574 MRPS33Q9Y291 106 aaKnown RBP13.02□□□□□ -0.33
NFKB1-201ENST00000226574 SNX11Q9Y5W9 270 aa13.02□□□□□ -0.33
NFKB1-201ENST00000226574 ARFGEF1Q9Y6D6 1849 aa13.02□□□□□ -0.33
NFKB1-201ENST00000226574 ZFC3H1O60293 1989 aaKnown RBP13.02□□□□□ -0.33
NFKB1-201ENST00000226574 WASHC1A8K0Z3 465 aa13.02□□□□□ -0.33
NFKB1-201ENST00000226574 SLC16A5O15375 505 aa13.02□□□□□ -0.33
NFKB1-201ENST00000226574 F8A1P23610 371 aa13.02□□□□□ -0.33
NFKB1-201ENST00000226574 VAMP1P23763 118 aa13.02□□□□□ -0.33
NFKB1-201ENST00000226574 GABRA3P34903 492 aa13.02□□□□□ -0.33
NFKB1-201ENST00000226574 EIF4HQ15056 248 aaKnown RBP13.02□□□□□ -0.33
NFKB1-201ENST00000226574 POU4F3Q15319 338 aa13.02□□□□□ -0.33
NFKB1-201ENST00000226574 ZMAT1Q5H9K5 638 aa13.02□□□□□ -0.33
NFKB1-201ENST00000226574 C6orf132Q5T0Z8 1188 aa13.02□□□□□ -0.33
NFKB1-201ENST00000226574 ZNF761Q86XN6 746 aaPredicted RBP13.02□□□□□ -0.33
NFKB1-201ENST00000226574 ZNF248Q8NDW4 579 aa13.02□□□□□ -0.33
NFKB1-201ENST00000226574 RPLP0P6Q8NHW5 317 aa13.02□□□□□ -0.33
NFKB1-201ENST00000226574 FANK1Q8TC84 345 aa13.02□□□□□ -0.33
NFKB1-201ENST00000226574 DYNC2LI1Q8TCX1 351 aa13.02□□□□□ -0.33
NFKB1-201ENST00000226574 SPRYD4Q8WW59 207 aaPredicted RBP13.02□□□□□ -0.33
NFKB1-201ENST00000226574 HERVK_113Q902F9 699 aa13.02□□□□□ -0.33
NFKB1-201ENST00000226574 HSPA12BQ96MM6 686 aa13.02□□□□□ -0.33
NFKB1-201ENST00000226574 DIABLOQ9NR28 239 aa13.02□□□□□ -0.33
NFKB1-201ENST00000226574 CCL26Q9Y258 94 aa13.02□□□□□ -0.33
NFKB1-201ENST00000226574 RTTNQ86VV8 2226 aa13.01□□□□□ -0.33
NFKB1-201ENST00000226574 TEX13CA0A0J9YWL9 993 aa13.01□□□□□ -0.33
NFKB1-201ENST00000226574 ANXA3P12429 323 aa13.01□□□□□ -0.33
NFKB1-201ENST00000226574 GPX2P18283 190 aa13.01□□□□□ -0.33
NFKB1-201ENST00000226574 SDHBP21912 280 aa13.01□□□□□ -0.33
NFKB1-201ENST00000226574 LCN1P31025 176 aa13.01□□□□□ -0.33
NFKB1-201ENST00000226574 PSMA6P60900 246 aaKnown RBP13.01□□□□□ -0.33
NFKB1-201ENST00000226574 CTBSQ01459 385 aa13.01□□□□□ -0.33
NFKB1-201ENST00000226574 ZNF750Q32MQ0 723 aa13.01□□□□□ -0.33
NFKB1-201ENST00000226574 METTL2BQ6P1Q9 378 aaKnown RBP13.01□□□□□ -0.33
NFKB1-201ENST00000226574 TMPRSS9Q7Z410 1059 aa13.01□□□□□ -0.33
NFKB1-201ENST00000226574 BOLLQ8N9W6 283 aaKnown RBP13.01□□□□□ -0.33
NFKB1-201ENST00000226574 OR4K3Q96R72 315 aa13.01□□□□□ -0.33
NFKB1-201ENST00000226574 S100A13Q99584 98 aa13.01□□□□□ -0.33
NFKB1-201ENST00000226574 MYEF2Q9P2K5 600 aaKnown RBP13.01□□□□□ -0.33
NFKB1-201ENST00000226574 SOBPA7XYQ1 873 aa13.01□□□□□ -0.33
NFKB1-201ENST00000226574 ARL6IP5O75915 188 aa13.01□□□□□ -0.33
NFKB1-201ENST00000226574 APODP05090 189 aa13.01□□□□□ -0.33
NFKB1-201ENST00000226574 NDUFV2P19404 249 aa13.01□□□□□ -0.33
NFKB1-201ENST00000226574 EIF1AXP47813 144 aaKnown RBP13.01□□□□□ -0.33
NFKB1-201ENST00000226574 HNRNPFP52597 415 aaKnown RBP13.01□□□□□ -0.33
NFKB1-201ENST00000226574 AP3S2P59780 193 aa13.01□□□□□ -0.33
NFKB1-201ENST00000226574 SKP1P63208 163 aa13.01□□□□□ -0.33
NFKB1-201ENST00000226574 PUM1Q14671 1186 aaKnown RBP eCLIP13.01□□□□□ -0.33
NFKB1-201ENST00000226574 LRIT3Q3SXY7 679 aa13.01□□□□□ -0.33
NFKB1-201ENST00000226574 NLGN4YQ8NFZ3 816 aaPredicted RBP13.01□□□□□ -0.33
NFKB1-201ENST00000226574 OR5H6Q8NGV6 325 aa13.01□□□□□ -0.33
NFKB1-201ENST00000226574 GNPDA2Q8TDQ7 276 aa13.01□□□□□ -0.33
NFKB1-201ENST00000226574 KCNN1Q92952 543 aa13.01□□□□□ -0.33
NFKB1-201ENST00000226574 ZMYND19Q96E35 227 aaPredicted RBP13.01□□□□□ -0.33
NFKB1-201ENST00000226574 C16orf58Q96GQ5 468 aa13.01□□□□□ -0.33
NFKB1-201ENST00000226574 GPER1Q99527 375 aa13.01□□□□□ -0.33
NFKB1-201ENST00000226574 PLSCR3Q9NRY6 295 aa13.01□□□□□ -0.33
NFKB1-201ENST00000226574 SIRT5Q9NXA8 310 aa13.01□□□□□ -0.33
NFKB1-201ENST00000226574 TRBV2A0A0J9YWF9 115 aa13.01□□□□□ -0.33
NFKB1-201ENST00000226574 ANTXRLA6NF34 631 aa13.01□□□□□ -0.33
NFKB1-201ENST00000226574 RNASET2O00584 256 aaKnown RBP13.01□□□□□ -0.33
NFKB1-201ENST00000226574 C1SP09871 688 aa13.01□□□□□ -0.33
NFKB1-201ENST00000226574 RPS25P62851 125 aaKnown RBP13.01□□□□□ -0.33
NFKB1-201ENST00000226574 OC90Q02509 493 aaPredicted RBP13.01□□□□□ -0.33
NFKB1-201ENST00000226574 DSC1Q08554 894 aa13.01□□□□□ -0.33
NFKB1-201ENST00000226574 SCRN3Q0VDG4 424 aa13.01□□□□□ -0.33
NFKB1-201ENST00000226574 SELENBP1Q13228 472 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms