RNA–Protein interactions for RNA: ENSMUST00000034713.8

Ldlr-201, Transcript of Low-density lipoprotein receptor, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ldlr, Length 4,627 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ldlr-201ENSMUST00000034713 S100a11P50543 98 aaKnown RBP9.47□□□□□ -0.89
Ldlr-201ENSMUST00000034713 Kcnj8P97794 424 aa9.47□□□□□ -0.89
Ldlr-201ENSMUST00000034713 Arhgap9Q1HDU4 648 aa9.47□□□□□ -0.89
Ldlr-201ENSMUST00000034713 Sntb2Q61235 520 aa9.47□□□□□ -0.89
Ldlr-201ENSMUST00000034713 ItpkcQ7TS72 678 aa9.47□□□□□ -0.89
Ldlr-201ENSMUST00000034713 Cdkl3Q8BLF2 595 aa9.47□□□□□ -0.89
Ldlr-201ENSMUST00000034713 Piwil4Q8CGT6 848 aa9.47□□□□□ -0.89
Ldlr-201ENSMUST00000034713 Csnka2ipQ8CH19 720 aa9.47□□□□□ -0.89
Ldlr-201ENSMUST00000034713 Tmem125Q8CHQ6 216 aa9.47□□□□□ -0.89
Ldlr-201ENSMUST00000034713 Akr1c18Q8K023 323 aa9.47□□□□□ -0.89
Ldlr-201ENSMUST00000034713 Mmgt2Q8R3L0 123 aa9.47□□□□□ -0.89
Ldlr-201ENSMUST00000034713 Tmem5Q8VDX6 444 aa9.47□□□□□ -0.89
Ldlr-201ENSMUST00000034713 Grk5Q8VEB1 590 aa9.47□□□□□ -0.89
Ldlr-201ENSMUST00000034713 Olfr771Q8VFH6 317 aa9.47□□□□□ -0.89
Ldlr-201ENSMUST00000034713 Olfr394Q8VGR5 310 aa9.47□□□□□ -0.89
Ldlr-201ENSMUST00000034713 Q91W34 466 aa9.47□□□□□ -0.89
Ldlr-201ENSMUST00000034713 Ms4a10Q99N03 267 aa9.47□□□□□ -0.89
Ldlr-201ENSMUST00000034713 Fank1Q9DAM9 344 aa9.47□□□□□ -0.89
Ldlr-201ENSMUST00000034713 GabarapQ9DCD6 117 aa9.47□□□□□ -0.89
Ldlr-201ENSMUST00000034713 Slc6a14Q9JMA9 638 aa9.47□□□□□ -0.89
Ldlr-201ENSMUST00000034713 Slc22a28B2RT89 552 aa9.47□□□□□ -0.89
Ldlr-201ENSMUST00000034713 Gm20828J3KMI7 228 aa9.47□□□□□ -0.89
Ldlr-201ENSMUST00000034713 Fpr-s1O08790 351 aa9.47□□□□□ -0.89
Ldlr-201ENSMUST00000034713 TyrP11344 533 aa9.47□□□□□ -0.89
Ldlr-201ENSMUST00000034713 Hnf1bP27889 558 aa9.47□□□□□ -0.89
Ldlr-201ENSMUST00000034713 GlaP51569 419 aa9.47□□□□□ -0.89
Ldlr-201ENSMUST00000034713 Dsc3P55850 896 aa9.47□□□□□ -0.89
Ldlr-201ENSMUST00000034713 Ctbp2P56546 445 aa9.47□□□□□ -0.89
Ldlr-201ENSMUST00000034713 Bpifa1P97361 278 aa9.47□□□□□ -0.89
Ldlr-201ENSMUST00000034713 Prelid2Q0VBB0 177 aa9.47□□□□□ -0.89
Ldlr-201ENSMUST00000034713 Nxpe2Q3U095 558 aa9.47□□□□□ -0.89
Ldlr-201ENSMUST00000034713 Cmpk2Q3U5Q7 447 aa9.47□□□□□ -0.89
Ldlr-201ENSMUST00000034713 Xkr5Q5GH66 676 aa9.47□□□□□ -0.89
Ldlr-201ENSMUST00000034713 Pgm2Q7TSV4 620 aa9.47□□□□□ -0.89
Ldlr-201ENSMUST00000034713 Slc34a3Q80SU6 601 aa9.47□□□□□ -0.89
Ldlr-201ENSMUST00000034713 Ttc29Q80VM3 471 aa9.47□□□□□ -0.89
Ldlr-201ENSMUST00000034713 C2cd4bQ80XU5 340 aa9.47□□□□□ -0.89
Ldlr-201ENSMUST00000034713 Zc3hc1Q80YV2 501 aa9.47□□□□□ -0.89
Ldlr-201ENSMUST00000034713 Olfm2Q8BM13 448 aa9.47□□□□□ -0.89
Ldlr-201ENSMUST00000034713 Smyd4Q8BTK5 799 aa9.47□□□□□ -0.89
Ldlr-201ENSMUST00000034713 C5ar2Q8BW93 344 aa9.47□□□□□ -0.89
Ldlr-201ENSMUST00000034713 Cdc123Q8CII2 336 aa9.47□□□□□ -0.89
Ldlr-201ENSMUST00000034713 Olfr525Q8VGL5 309 aa9.47□□□□□ -0.89
Ldlr-201ENSMUST00000034713 Cacng6Q8VHW3 260 aa9.47□□□□□ -0.89
Ldlr-201ENSMUST00000034713 Slc22a30Q96LX3 552 aa9.47□□□□□ -0.89
Ldlr-201ENSMUST00000034713 Mcoln1Q99J21 580 aa9.47□□□□□ -0.89
Ldlr-201ENSMUST00000034713 Gpr146Q99LE2 333 aa9.47□□□□□ -0.89
Ldlr-201ENSMUST00000034713 Q9CWU4 180 aaKnown RBP9.47□□□□□ -0.89
Ldlr-201ENSMUST00000034713 Spcs2Q9CYN2 226 aaKnown RBP9.47□□□□□ -0.89
Ldlr-201ENSMUST00000034713 Pin1Q9QUR7 165 aa9.47□□□□□ -0.89
Ldlr-201ENSMUST00000034713 Tubd1Q9R1K7 455 aa9.47□□□□□ -0.89
Ldlr-201ENSMUST00000034713 CalcrlQ9R1W5 463 aa9.47□□□□□ -0.89
Ldlr-201ENSMUST00000034713 Ilf3Q9Z1X4 898 aaKnown RBP9.47□□□□□ -0.89
Ldlr-201ENSMUST00000034713 Plce1Q8K4S1 2282 aa9.46□□□□□ -0.89
Ldlr-201ENSMUST00000034713 CerklA2AQH1 525 aa9.46□□□□□ -0.89
Ldlr-201ENSMUST00000034713 Olfr592E9PYB3 312 aa9.46□□□□□ -0.89
Ldlr-201ENSMUST00000034713 Vmn1r88E9Q235 316 aa9.46□□□□□ -0.89
Ldlr-201ENSMUST00000034713 Pcsk6F6XJP7 959 aa9.46□□□□□ -0.89
Ldlr-201ENSMUST00000034713 Vmn1r14H3BJ46 303 aa9.46□□□□□ -0.89
Ldlr-201ENSMUST00000034713 AmbnO55189 407 aa9.46□□□□□ -0.89
Ldlr-201ENSMUST00000034713 RngttO55236 597 aa9.46□□□□□ -0.89
Ldlr-201ENSMUST00000034713 Dhcr7O88455 471 aa9.46□□□□□ -0.89
Ldlr-201ENSMUST00000034713 RhoP15409 348 aa9.46□□□□□ -0.89
Ldlr-201ENSMUST00000034713 Wnt4P22724 351 aa9.46□□□□□ -0.89
Ldlr-201ENSMUST00000034713 Flt3lgP49772 232 aa9.46□□□□□ -0.89
Ldlr-201ENSMUST00000034713 Hrh1P70174 488 aa9.46□□□□□ -0.89
Ldlr-201ENSMUST00000034713 Pitx1P70314 315 aa9.46□□□□□ -0.89
Ldlr-201ENSMUST00000034713 Grm5Q3UVX5 1203 aa9.46□□□□□ -0.89
Ldlr-201ENSMUST00000034713 Spag8Q3V0Q6 470 aa9.46□□□□□ -0.89
Ldlr-201ENSMUST00000034713 Mapk3Q63844 380 aa9.46□□□□□ -0.89
Ldlr-201ENSMUST00000034713 Apex2Q68G58 516 aa9.46□□□□□ -0.89
Ldlr-201ENSMUST00000034713 Cyp2d40Q6P8N9 338 aa9.46□□□□□ -0.89
Ldlr-201ENSMUST00000034713 Npr2Q6VVW5 1047 aa9.46□□□□□ -0.89
Ldlr-201ENSMUST00000034713 Kiss1Q6Y4S4 130 aa9.46□□□□□ -0.89
Ldlr-201ENSMUST00000034713 Olfr366Q7TRY4 309 aa9.46□□□□□ -0.89
Ldlr-201ENSMUST00000034713 Nt5dc1Q8C5P5 467 aa9.46□□□□□ -0.89
Ldlr-201ENSMUST00000034713 Ccm2lQ8VCC6 481 aa9.46□□□□□ -0.89
Ldlr-201ENSMUST00000034713 Chchd4Q8VEA4 139 aa9.46□□□□□ -0.89
Ldlr-201ENSMUST00000034713 Olfr729Q8VET4 323 aa9.46□□□□□ -0.89
Ldlr-201ENSMUST00000034713 Fam122cQ9D5J5 180 aa9.46□□□□□ -0.89
Ldlr-201ENSMUST00000034713 Tubb3Q9ERD7 450 aa9.46□□□□□ -0.89
Ldlr-201ENSMUST00000034713 Olfr1188A2AV10 312 aa9.46□□□□□ -0.89
Ldlr-201ENSMUST00000034713 Ssxa1B1AUS7 101 aa9.46□□□□□ -0.89
Ldlr-201ENSMUST00000034713 Btbd16E9Q173 522 aa9.46□□□□□ -0.89
Ldlr-201ENSMUST00000034713 Pdlim3O70209 316 aaKnown RBP9.46□□□□□ -0.89
Ldlr-201ENSMUST00000034713 Gtf2h4O70422 463 aaKnown RBP9.46□□□□□ -0.89
Ldlr-201ENSMUST00000034713 GzmeP08884 248 aa9.46□□□□□ -0.89
Ldlr-201ENSMUST00000034713 OtcP11725 354 aa9.46□□□□□ -0.89
Ldlr-201ENSMUST00000034713 SgcgP82348 291 aa9.46□□□□□ -0.89
Ldlr-201ENSMUST00000034713 Atp5a1Q03265 553 aaKnown RBP9.46□□□□□ -0.89
Ldlr-201ENSMUST00000034713 Acss3Q14DH7 682 aa9.46□□□□□ -0.89
Ldlr-201ENSMUST00000034713 Olfr381Q5SSP0 311 aa9.46□□□□□ -0.89
Ldlr-201ENSMUST00000034713 Map3k3Q61084 626 aa9.46□□□□□ -0.89
Ldlr-201ENSMUST00000034713 Nsg1Q62092 185 aa9.46□□□□□ -0.89
Ldlr-201ENSMUST00000034713 Eri1Q7TMF2 345 aaKnown RBP9.46□□□□□ -0.89
Ldlr-201ENSMUST00000034713 DdnQ80TS7 710 aa9.46□□□□□ -0.89
Ldlr-201ENSMUST00000034713 BtdQ8CIF4 520 aa9.46□□□□□ -0.89
Ldlr-201ENSMUST00000034713 Cdhr1Q8VHP6 859 aa9.46□□□□□ -0.89
Ldlr-201ENSMUST00000034713 Olfr103Q920Y8 313 aa9.46□□□□□ -0.89
Ldlr-201ENSMUST00000034713 Znf639Q99KZ6 485 aa9.46□□□□□ -0.89
Retrieved 100 of 22,080 RNA–protein pairs in 24.9 ms