RNA–Protein interactions for RNA: ENST00000636306.1

CHD2-223, Transcript of chromodomain helicase DNA binding protein 2, human

TSL 5

Gene CHD2, Length 1,755 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHD2-223	ENST00000636306	ZNF451	Q9Y4E5	1061 aa		10.2	□□□□□ -0.78
CHD2-223	ENST00000636306	POLR3H	Q9Y535	204 aa	Predicted RBP	10.2	□□□□□ -0.78
CHD2-223	ENST00000636306	PCDHGC4	Q9Y5F7	938 aa		10.2	□□□□□ -0.78
CHD2-223	ENST00000636306	TEX13C	A0A0J9YWL9	993 aa		10.19	□□□□□ -0.78
CHD2-223	ENST00000636306		A0A1B0GTL3	188 aa		10.19	□□□□□ -0.78
CHD2-223	ENST00000636306	ANKDD1B	A6NHY2	528 aa		10.19	□□□□□ -0.78
CHD2-223	ENST00000636306	SULT1C2	O00338	296 aa		10.19	□□□□□ -0.78
CHD2-223	ENST00000636306	RAD1	O60671	282 aa		10.19	□□□□□ -0.78
CHD2-223	ENST00000636306	LILRB3	O75022	631 aa		10.19	□□□□□ -0.78
CHD2-223	ENST00000636306	NDUFS6	O75380	124 aa	Known RBP	10.19	□□□□□ -0.78
CHD2-223	ENST00000636306	GJB3	O75712	270 aa		10.19	□□□□□ -0.78
CHD2-223	ENST00000636306	C8A	P07357	584 aa		10.19	□□□□□ -0.78
CHD2-223	ENST00000636306	ACAA1	P09110	424 aa	Predicted RBP	10.19	□□□□□ -0.78
CHD2-223	ENST00000636306	TYR	P14679	529 aa		10.19	□□□□□ -0.78
CHD2-223	ENST00000636306	CPE	P16870	476 aa		10.19	□□□□□ -0.78
CHD2-223	ENST00000636306	ZNF7	P17097	686 aa	Predicted RBP	10.19	□□□□□ -0.78
CHD2-223	ENST00000636306	HOXB9	P17482	250 aa	Predicted RBP	10.19	□□□□□ -0.78
CHD2-223	ENST00000636306	SPI1	P17947	270 aa		10.19	□□□□□ -0.78
CHD2-223	ENST00000636306	KDELR2	P33947	212 aa		10.19	□□□□□ -0.78
CHD2-223	ENST00000636306	RGS4	P49798	205 aa		10.19	□□□□□ -0.78
CHD2-223	ENST00000636306	NR0B1	P51843	470 aa	Known RBP	10.19	□□□□□ -0.78
CHD2-223	ENST00000636306	IL2	P60568	153 aa		10.19	□□□□□ -0.78
CHD2-223	ENST00000636306	PLIN5	Q00G26	463 aa		10.19	□□□□□ -0.78
CHD2-223	ENST00000636306	RPL6	Q02878	288 aa	Known RBP	10.19	□□□□□ -0.78
CHD2-223	ENST00000636306	PPIG	Q13427	754 aa	Known RBP eCLIP	10.19	□□□□□ -0.78	7e-8	■□□□□ 11
CHD2-223	ENST00000636306	PTPRN	Q16849	979 aa		10.19	□□□□□ -0.78
CHD2-223	ENST00000636306	TXNDC8	Q6A555	127 aa		10.19	□□□□□ -0.78
CHD2-223	ENST00000636306	FRMPD2B	Q6IN97	320 aa		10.19	□□□□□ -0.78
CHD2-223	ENST00000636306	ZNF425	Q6IV72	752 aa		10.19	□□□□□ -0.78
CHD2-223	ENST00000636306	SCIMP	Q6UWF3	145 aa		10.19	□□□□□ -0.78
CHD2-223	ENST00000636306	LINGO4	Q6UY18	593 aa		10.19	□□□□□ -0.78
CHD2-223	ENST00000636306		Q6ZPB1	254 aa	Predicted RBP	10.19	□□□□□ -0.78
CHD2-223	ENST00000636306	MSANTD1	Q6ZTZ1	278 aa		10.19	□□□□□ -0.78
CHD2-223	ENST00000636306	KRT77	Q7Z794	578 aa		10.19	□□□□□ -0.78
CHD2-223	ENST00000636306	PHACTR4	Q8IZ21	702 aa		10.19	□□□□□ -0.78
CHD2-223	ENST00000636306	MOSPD2	Q8NHP6	518 aa		10.19	□□□□□ -0.78
CHD2-223	ENST00000636306	FIBIN	Q8TAL6	211 aa		10.19	□□□□□ -0.78
CHD2-223	ENST00000636306	ZDHHC12	Q96GR4	267 aa		10.19	□□□□□ -0.78
CHD2-223	ENST00000636306	HSH2D	Q96JZ2	352 aa		10.19	□□□□□ -0.78
CHD2-223	ENST00000636306	ZNF285	Q96NJ3	590 aa		10.19	□□□□□ -0.78
CHD2-223	ENST00000636306	KATNB1	Q9BVA0	655 aa		10.19	□□□□□ -0.78
CHD2-223	ENST00000636306	CLMP	Q9H6B4	373 aa		10.19	□□□□□ -0.78
CHD2-223	ENST00000636306	DDX31	Q9H8H2	851 aa	Known RBP	10.19	□□□□□ -0.78
CHD2-223	ENST00000636306	EVA1A	Q9H8M9	152 aa		10.19	□□□□□ -0.78
CHD2-223	ENST00000636306	IL23A	Q9NPF7	189 aa		10.19	□□□□□ -0.78
CHD2-223	ENST00000636306	NUDT4	Q9NZJ9	180 aa		10.19	□□□□□ -0.78
CHD2-223	ENST00000636306	SLC25A13	Q9UJS0	675 aa		10.19	□□□□□ -0.78
CHD2-223	ENST00000636306	ZNF225	Q9UK10	706 aa		10.19	□□□□□ -0.78
CHD2-223	ENST00000636306	FBXL2	Q9UKC9	423 aa		10.19	□□□□□ -0.78
CHD2-223	ENST00000636306	PPIE	Q9UNP9	301 aa	Known RBP	10.19	□□□□□ -0.78
CHD2-223	ENST00000636306	ENTPD4	Q9Y227	616 aa		10.19	□□□□□ -0.78
CHD2-223	ENST00000636306	PCDHB9	Q9Y5E1	797 aa		10.19	□□□□□ -0.78
CHD2-223	ENST00000636306	PTPRS	Q13332	1948 aa		10.19	□□□□□ -0.78
CHD2-223	ENST00000636306	RAB19	A4D1S5	217 aa		10.19	□□□□□ -0.78
CHD2-223	ENST00000636306	DBX1	A6NMT0	343 aa		10.19	□□□□□ -0.78
CHD2-223	ENST00000636306		L7N2F9	121 aa		10.19	□□□□□ -0.78
CHD2-223	ENST00000636306	TGM5	O43548	720 aa		10.19	□□□□□ -0.78
CHD2-223	ENST00000636306	ECI2	O75521	394 aa		10.19	□□□□□ -0.78
CHD2-223	ENST00000636306	EIF3G	O75821	320 aa	Known RBP eCLIP	10.19	□□□□□ -0.78
CHD2-223	ENST00000636306	ADRA2A	P08913	450 aa		10.19	□□□□□ -0.78
CHD2-223	ENST00000636306	SFTPC	P11686	197 aa		10.19	□□□□□ -0.78
CHD2-223	ENST00000636306	PRF1	P14222	555 aa		10.19	□□□□□ -0.78
CHD2-223	ENST00000636306	CSF2RA	P15509	400 aa		10.19	□□□□□ -0.78
CHD2-223	ENST00000636306	CXCL3	P19876	107 aa		10.19	□□□□□ -0.78
CHD2-223	ENST00000636306	ACSL1	P33121	698 aa		10.19	□□□□□ -0.78
CHD2-223	ENST00000636306	SPAM1	P38567	509 aa		10.19	□□□□□ -0.78
CHD2-223	ENST00000636306	SOX3	P41225	446 aa		10.19	□□□□□ -0.78
CHD2-223	ENST00000636306	BDKRB1	P46663	353 aa		10.19	□□□□□ -0.78
CHD2-223	ENST00000636306	RPS7	P62081	194 aa	Known RBP	10.19	□□□□□ -0.78
CHD2-223	ENST00000636306	SNRPG	P62308	76 aa	Known RBP	10.19	□□□□□ -0.78
CHD2-223	ENST00000636306	SNRPD1	P62314	119 aa	Known RBP	10.19	□□□□□ -0.78
CHD2-223	ENST00000636306	MXD1	Q05195	221 aa		10.19	□□□□□ -0.78
CHD2-223	ENST00000636306	P2RY14	Q15391	338 aa		10.19	□□□□□ -0.78
CHD2-223	ENST00000636306	NR6A1	Q15406	480 aa		10.19	□□□□□ -0.78
CHD2-223	ENST00000636306	FAM174B	Q3ZCQ3	159 aa		10.19	□□□□□ -0.78
CHD2-223	ENST00000636306	PLK5	Q496M5	336 aa		10.19	□□□□□ -0.78
CHD2-223	ENST00000636306	TMEM201	Q5SNT2	666 aa		10.19	□□□□□ -0.78
CHD2-223	ENST00000636306	ZDHHC20	Q5W0Z9	365 aa		10.19	□□□□□ -0.78
CHD2-223	ENST00000636306	FBXO46	Q6PJ61	603 aa	Predicted RBP	10.19	□□□□□ -0.78
CHD2-223	ENST00000636306	KANSL1	Q7Z3B3	1105 aa		10.19	□□□□□ -0.78
CHD2-223	ENST00000636306	TRMT11	Q7Z4G4	463 aa	Known RBP	10.19	□□□□□ -0.78
CHD2-223	ENST00000636306	ABI3BP	Q7Z7G0	1075 aa		10.19	□□□□□ -0.78
CHD2-223	ENST00000636306	PDZD3	Q86UT5	571 aa		10.19	□□□□□ -0.78
CHD2-223	ENST00000636306	TMEM17	Q86X19	198 aa		10.19	□□□□□ -0.78
CHD2-223	ENST00000636306	TBC1D19	Q8N5T2	526 aa		10.19	□□□□□ -0.78
CHD2-223	ENST00000636306	ZNF454	Q8N9F8	522 aa		10.19	□□□□□ -0.78
CHD2-223	ENST00000636306	KREMEN2	Q8NCW0	462 aa		10.19	□□□□□ -0.78
CHD2-223	ENST00000636306	OR10G2	Q8NGC3	310 aa		10.19	□□□□□ -0.78
CHD2-223	ENST00000636306	ADAMTS19	Q8TE59	1207 aa		10.19	□□□□□ -0.78
CHD2-223	ENST00000636306	ACOT12	Q8WYK0	555 aa		10.19	□□□□□ -0.78
CHD2-223	ENST00000636306	LCOR	Q96JN0	433 aa	Predicted RBP	10.19	□□□□□ -0.78
CHD2-223	ENST00000636306	C7orf50	Q9BRJ6	194 aa	Known RBP	10.19	□□□□□ -0.78
CHD2-223	ENST00000636306	SPATA5L1	Q9BVQ7	753 aa		10.19	□□□□□ -0.78
CHD2-223	ENST00000636306	POLR2J2	Q9GZM3	115 aa	Known RBP	10.19	□□□□□ -0.78
CHD2-223	ENST00000636306	HDHD2	Q9H0R4	259 aa		10.19	□□□□□ -0.78
CHD2-223	ENST00000636306	SPHK1	Q9NYA1	384 aa		10.19	□□□□□ -0.78
CHD2-223	ENST00000636306	IL17C	Q9P0M4	197 aa		10.19	□□□□□ -0.78
CHD2-223	ENST00000636306	TSR3	Q9UJK0	312 aa	Known RBP	10.19	□□□□□ -0.78
CHD2-223	ENST00000636306	FCF1	Q9Y324	198 aa	Known RBP	10.19	□□□□□ -0.78
CHD2-223	ENST00000636306	SCN8A	Q9UQD0	1980 aa		10.18	□□□□□ -0.78

Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms