RNA–Protein interactions for RNA: ENST00000598201.5

SHKBP1-216, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 2,069 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-216ENST00000598201 ANXA8P13928 327 aa15.97■□□□□ 0.15
SHKBP1-216ENST00000598201 DEF8Q6ZN54 512 aa15.97■□□□□ 0.15
SHKBP1-216ENST00000598201 C17orf82Q86X59 251 aaPredicted RBP15.97■□□□□ 0.15
SHKBP1-216ENST00000598201 KRT73Q86Y46 540 aa15.97■□□□□ 0.15
SHKBP1-216ENST00000598201 SETD9Q8NE22 299 aa15.97■□□□□ 0.15
SHKBP1-216ENST00000598201 OR9A4Q8NGU2 314 aa15.97■□□□□ 0.15
SHKBP1-216ENST00000598201 PHF10Q8WUB8 498 aaKnown RBP15.97■□□□□ 0.15
SHKBP1-216ENST00000598201 RASSF5Q8WWW0 418 aa15.97■□□□□ 0.15
SHKBP1-216ENST00000598201 ZG16BQ96DA0 208 aa15.97■□□□□ 0.15
SHKBP1-216ENST00000598201 SLC35A4Q96G79 324 aa15.97■□□□□ 0.15
SHKBP1-216ENST00000598201 ALPK1Q96QP1 1244 aa15.97■□□□□ 0.15
SHKBP1-216ENST00000598201 SLC38A3Q99624 504 aa15.97■□□□□ 0.15
SHKBP1-216ENST00000598201 ACTRT3Q9BYD9 372 aa15.97■□□□□ 0.15
SHKBP1-216ENST00000598201 NMNAT1Q9HAN9 279 aaPredicted RBP15.97■□□□□ 0.15
SHKBP1-216ENST00000598201 PRDM9Q9NQV7 894 aa15.97■□□□□ 0.15
SHKBP1-216ENST00000598201 PAPOLBQ9NRJ5 636 aaKnown RBP15.97■□□□□ 0.15
SHKBP1-216ENST00000598201 ETAA1Q9NY74 926 aa15.97■□□□□ 0.15
SHKBP1-216ENST00000598201 LMO7DNF2Z398 122 aa15.96■□□□□ 0.15
SHKBP1-216ENST00000598201 XPNPEP2O43895 674 aa15.96■□□□□ 0.15
SHKBP1-216ENST00000598201 RDH16O75452 317 aa15.96■□□□□ 0.15
SHKBP1-216ENST00000598201 ZIC2O95409 532 aaPredicted RBP15.96■□□□□ 0.15
SHKBP1-216ENST00000598201 PORP16435 677 aaPredicted RBP15.96■□□□□ 0.15
SHKBP1-216ENST00000598201 FMO3P31513 532 aa15.96■□□□□ 0.15
SHKBP1-216ENST00000598201 NEDD8Q15843 81 aa15.96■□□□□ 0.15
SHKBP1-216ENST00000598201 TRMT12Q53H54 448 aaKnown RBP15.96■□□□□ 0.15
SHKBP1-216ENST00000598201 AP1ARQ63HQ0 302 aa15.96■□□□□ 0.15
SHKBP1-216ENST00000598201 MFSD12Q6NUT3 480 aa15.96■□□□□ 0.15
SHKBP1-216ENST00000598201 ZC3H14Q6PJT7 736 aaKnown RBP15.96■□□□□ 0.15
SHKBP1-216ENST00000598201 B3GNT8Q7Z7M8 397 aa15.96■□□□□ 0.15
SHKBP1-216ENST00000598201 SAMD14Q8IZD0 417 aaPredicted RBP15.96■□□□□ 0.15
SHKBP1-216ENST00000598201 OR2L13Q8N349 312 aa15.96■□□□□ 0.15
SHKBP1-216ENST00000598201 DNAJC22Q8N4W6 341 aa15.96■□□□□ 0.15
SHKBP1-216ENST00000598201 SLC16A11Q8NCK7 471 aa15.96■□□□□ 0.15
SHKBP1-216ENST00000598201 BPIFB6Q8NFQ5 453 aa15.96■□□□□ 0.15
SHKBP1-216ENST00000598201 DUSP15Q9H1R2 295 aaPredicted RBP15.96■□□□□ 0.15
SHKBP1-216ENST00000598201 SLC38A1Q9H2H9 487 aa15.96■□□□□ 0.15
SHKBP1-216ENST00000598201 UCK1Q9HA47 277 aa15.96■□□□□ 0.15
SHKBP1-216ENST00000598201 R4GN57 208 aa15.96■□□□□ 0.15
SHKBP1-216ENST00000598201 A0A0G2JPF8 293 aa15.96■□□□□ 0.15
SHKBP1-216ENST00000598201 LILRA5A6NI73 299 aa15.96■□□□□ 0.15
SHKBP1-216ENST00000598201 HNRNPCL2B2RXH8 293 aa15.96■□□□□ 0.15
SHKBP1-216ENST00000598201 HNRNPCL3B7ZW38 293 aa15.96■□□□□ 0.15
SHKBP1-216ENST00000598201 CCNB2O95067 398 aa15.96■□□□□ 0.15
SHKBP1-216ENST00000598201 HNRNPCL4P0DMR1 293 aa15.96■□□□□ 0.15
SHKBP1-216ENST00000598201 POU2F1P14859 743 aa15.96■□□□□ 0.15
SHKBP1-216ENST00000598201 GSSP48637 474 aa15.96■□□□□ 0.15
SHKBP1-216ENST00000598201 RPS6KA3P51812 740 aa15.96■□□□□ 0.15
SHKBP1-216ENST00000598201 HNRNPKP61978 463 aaKnown RBP eCLIP15.96■□□□□ 0.15
SHKBP1-216ENST00000598201 CHRNEQ04844 493 aa15.96■□□□□ 0.15
SHKBP1-216ENST00000598201 PLK5Q496M5 336 aa15.96■□□□□ 0.15
SHKBP1-216ENST00000598201 ZBED5Q49AG3 693 aa15.96■□□□□ 0.15
SHKBP1-216ENST00000598201 ZNF628Q5EBL2 1059 aa15.96■□□□□ 0.15
SHKBP1-216ENST00000598201 COLEC12Q5KU26 742 aa15.96■□□□□ 0.15
SHKBP1-216ENST00000598201 BROXQ5VW32 411 aa15.96■□□□□ 0.15
SHKBP1-216ENST00000598201 KLHL35Q6PF15 583 aa15.96■□□□□ 0.15
SHKBP1-216ENST00000598201 GPR141Q7Z602 305 aa15.96■□□□□ 0.15
SHKBP1-216ENST00000598201 TSPYL5Q86VY4 417 aaPredicted RBP15.96■□□□□ 0.15
SHKBP1-216ENST00000598201 HRASLS5Q96KN8 279 aa15.96■□□□□ 0.15
SHKBP1-216ENST00000598201 MS4A4EQ96PG1 132 aa15.96■□□□□ 0.15
SHKBP1-216ENST00000598201 HCN4Q9Y3Q4 1203 aa15.96■□□□□ 0.15
SHKBP1-216ENST00000598201 PCDHGA6Q9Y5G7 932 aa15.96■□□□□ 0.15
SHKBP1-216ENST00000598201 HSPE1-MOB4S4R3N1 261 aa15.96■□□□□ 0.15
SHKBP1-216ENST00000598201 CEP192Q8TEP8 1941 aa15.95■□□□□ 0.14
SHKBP1-216ENST00000598201 ASNA1O43681 348 aa15.95■□□□□ 0.14
SHKBP1-216ENST00000598201 ANGPTL1O95841 491 aa15.95■□□□□ 0.14
SHKBP1-216ENST00000598201 CBLP22681 906 aa15.95■□□□□ 0.14
SHKBP1-216ENST00000598201 GFERP55789 205 aa15.95■□□□□ 0.14
SHKBP1-216ENST00000598201 GNA13Q14344 377 aa15.95■□□□□ 0.14
SHKBP1-216ENST00000598201 RAB39AQ14964 217 aa15.95■□□□□ 0.14
SHKBP1-216ENST00000598201 MAD2L1BPQ15013 274 aaPredicted RBP15.95■□□□□ 0.14
SHKBP1-216ENST00000598201 SEC23BQ15437 767 aa15.95■□□□□ 0.14
SHKBP1-216ENST00000598201 SMN1Q16637 294 aaKnown RBP15.95■□□□□ 0.14
SHKBP1-216ENST00000598201 PRTGQ2VWP7 1150 aa15.95■□□□□ 0.14
SHKBP1-216ENST00000598201 FHL5Q5TD97 284 aa15.95■□□□□ 0.14
SHKBP1-216ENST00000598201 ZNF770Q6IQ21 691 aaPredicted RBP15.95■□□□□ 0.14
SHKBP1-216ENST00000598201 GTPBP3Q969Y2 492 aaKnown RBP15.95■□□□□ 0.14
SHKBP1-216ENST00000598201 ZC3H10Q96K80 434 aaKnown RBP15.95■□□□□ 0.14
SHKBP1-216ENST00000598201 DHRS1Q96LJ7 313 aa15.95■□□□□ 0.14
SHKBP1-216ENST00000598201 APOL4Q9BPW4 351 aa15.95■□□□□ 0.14
SHKBP1-216ENST00000598201 PSD2Q9BQI7 771 aa15.95■□□□□ 0.14
SHKBP1-216ENST00000598201 BTBD2Q9BX70 525 aa15.95■□□□□ 0.14
SHKBP1-216ENST00000598201 RASSF1Q9NS23 344 aa15.95■□□□□ 0.14
SHKBP1-216ENST00000598201 GIN1Q9NXP7 522 aa15.95■□□□□ 0.14
SHKBP1-216ENST00000598201 POFUT2Q9Y2G5 429 aa15.95■□□□□ 0.14
SHKBP1-216ENST00000598201 SPTBP11277 2137 aa15.95■□□□□ 0.14
SHKBP1-216ENST00000598201 TMEM131Q92545 1883 aa15.95■□□□□ 0.14
SHKBP1-216ENST00000598201 PTGES3LE9PB15 166 aa15.95■□□□□ 0.14
SHKBP1-216ENST00000598201 FCMRO60667 390 aa15.95■□□□□ 0.14
SHKBP1-216ENST00000598201 ABCB7O75027 752 aa15.95■□□□□ 0.14
SHKBP1-216ENST00000598201 GPR75O95800 540 aa15.95■□□□□ 0.14
SHKBP1-216ENST00000598201 GASTP01350 101 aa15.95■□□□□ 0.14
SHKBP1-216ENST00000598201 ESRRGP62508 458 aa15.95■□□□□ 0.14
SHKBP1-216ENST00000598201 TOP3AQ13472 1001 aaPredicted RBP15.95■□□□□ 0.14
SHKBP1-216ENST00000598201 PMS2CLQ68D20 193 aa15.95■□□□□ 0.14
SHKBP1-216ENST00000598201 XAF1Q6GPH4 301 aa15.95■□□□□ 0.14
SHKBP1-216ENST00000598201 OGFOD3Q6PK18 319 aa15.95■□□□□ 0.14
SHKBP1-216ENST00000598201 SPARTQ8N0X7 666 aa15.95■□□□□ 0.14
SHKBP1-216ENST00000598201 TAGAPQ8N103 731 aa15.95■□□□□ 0.14
SHKBP1-216ENST00000598201 AQP11Q8NBQ7 271 aa15.95■□□□□ 0.14
SHKBP1-216ENST00000598201 ADAMTS15Q8TE58 950 aa15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms