RNA–Protein interactions for RNA: ENST00000589219.1

VPS25-202, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 2

Gene VPS25, Length 914 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-202ENST00000589219 ZAR1LA6NP61 321 aa9.36□□□□□ -0.91
VPS25-202ENST00000589219 C2orf74A8MZ97 194 aa9.36□□□□□ -0.91
VPS25-202ENST00000589219 PATE3B3GLJ2 98 aa9.36□□□□□ -0.91
VPS25-202ENST00000589219 H0Y8X5 98 aa9.36□□□□□ -0.91
VPS25-202ENST00000589219 J3KTA2 159 aa9.36□□□□□ -0.91
VPS25-202ENST00000589219 KIR2DS3K7RE56 304 aa9.36□□□□□ -0.91
VPS25-202ENST00000589219 CDX4O14627 284 aaPredicted RBP9.36□□□□□ -0.91
VPS25-202ENST00000589219 SCAMP1O15126 338 aa9.36□□□□□ -0.91
VPS25-202ENST00000589219 PPM1DO15297 605 aa9.36□□□□□ -0.91
VPS25-202ENST00000589219 PROM1O43490 865 aa9.36□□□□□ -0.91
VPS25-202ENST00000589219 PCDHGA12O60330 932 aa9.36□□□□□ -0.91
VPS25-202ENST00000589219 ERAL1O75616 437 aaKnown RBP9.36□□□□□ -0.91
VPS25-202ENST00000589219 UGT2B17O75795 530 aa9.36□□□□□ -0.91
VPS25-202ENST00000589219 SLITRK5O94991 958 aa9.36□□□□□ -0.91
VPS25-202ENST00000589219 EML2O95834 649 aa9.36□□□□□ -0.91
VPS25-202ENST00000589219 VIPP01282 170 aa9.36□□□□□ -0.91
VPS25-202ENST00000589219 HOXB3P14651 431 aaPredicted RBP9.36□□□□□ -0.91
VPS25-202ENST00000589219 ELAVL4P26378 380 aaKnown RBP9.36□□□□□ -0.91
VPS25-202ENST00000589219 EPHA2P29317 976 aa9.36□□□□□ -0.91
VPS25-202ENST00000589219 SLC19A1P41440 591 aa9.36□□□□□ -0.91
VPS25-202ENST00000589219 MASP1P48740 699 aa9.36□□□□□ -0.91
VPS25-202ENST00000589219 ST13P50502 369 aaKnown RBP9.36□□□□□ -0.91
VPS25-202ENST00000589219 EMX1Q04741 257 aaPredicted RBP9.36□□□□□ -0.91
VPS25-202ENST00000589219 GANABQ14697 944 aaKnown RBP9.36□□□□□ -0.91
VPS25-202ENST00000589219 KIR2DS5Q14953 304 aa9.36□□□□□ -0.91
VPS25-202ENST00000589219 DUSP7Q16829 419 aa9.36□□□□□ -0.91
VPS25-202ENST00000589219 FGD3Q5JSP0 725 aa9.36□□□□□ -0.91
VPS25-202ENST00000589219 DCST1Q5T197 706 aa9.36□□□□□ -0.91
VPS25-202ENST00000589219 ATAD3BQ5T9A4 648 aa9.36□□□□□ -0.91
VPS25-202ENST00000589219 UBE2UQ5VVX9 321 aa9.36□□□□□ -0.91
VPS25-202ENST00000589219 KIAA0895LQ68EN5 471 aa9.36□□□□□ -0.91
VPS25-202ENST00000589219 ZNF770Q6IQ21 691 aaPredicted RBP9.36□□□□□ -0.91
VPS25-202ENST00000589219 FAM180BQ6P0A1 224 aa9.36□□□□□ -0.91
VPS25-202ENST00000589219 SLC23A3Q6PIS1 610 aa9.36□□□□□ -0.91
VPS25-202ENST00000589219 LINC00299Q6ZSB3 139 aa9.36□□□□□ -0.91
VPS25-202ENST00000589219 ABHD13Q7L211 337 aa9.36□□□□□ -0.91
VPS25-202ENST00000589219 SLC44A2Q8IWA5 706 aaPredicted RBP9.36□□□□□ -0.91
VPS25-202ENST00000589219 FAM20CQ8IXL6 584 aa9.36□□□□□ -0.91
VPS25-202ENST00000589219 DNAJC22Q8N4W6 341 aa9.36□□□□□ -0.91
VPS25-202ENST00000589219 ZNF655Q8N720 491 aaPredicted RBP9.36□□□□□ -0.91
VPS25-202ENST00000589219 OR52J3Q8NH60 311 aa9.36□□□□□ -0.91
VPS25-202ENST00000589219 RHOXF1Q8NHV9 184 aa9.36□□□□□ -0.91
VPS25-202ENST00000589219 C9orf43Q8TAL5 461 aaPredicted RBP9.36□□□□□ -0.91
VPS25-202ENST00000589219 GPBAR1Q8TDU6 330 aa9.36□□□□□ -0.91
VPS25-202ENST00000589219 UTP15Q8TED0 518 aaKnown RBP9.36□□□□□ -0.91
VPS25-202ENST00000589219 JPH3Q8WXH2 748 aaPredicted RBP9.36□□□□□ -0.91
VPS25-202ENST00000589219 RAB8BQ92930 207 aa9.36□□□□□ -0.91
VPS25-202ENST00000589219 TSACCQ96A04 125 aaPredicted RBP9.36□□□□□ -0.91
VPS25-202ENST00000589219 FKBP10Q96AY3 582 aa9.36□□□□□ -0.91
VPS25-202ENST00000589219 TM4SF19Q96DZ7 209 aa9.36□□□□□ -0.91
VPS25-202ENST00000589219 CNRIP1Q96F85 164 aaPredicted RBP9.36□□□□□ -0.91
VPS25-202ENST00000589219 PRRC1Q96M27 445 aa9.36□□□□□ -0.91
VPS25-202ENST00000589219 MS4A4EQ96PG1 132 aa9.36□□□□□ -0.91
VPS25-202ENST00000589219 OR2A14Q96R47 310 aa9.36□□□□□ -0.91
VPS25-202ENST00000589219 NIPSNAP1Q9BPW8 284 aa9.36□□□□□ -0.91
VPS25-202ENST00000589219 FUNDC2Q9BWH2 189 aa9.36□□□□□ -0.91
VPS25-202ENST00000589219 NAA50Q9GZZ1 169 aaKnown RBP9.36□□□□□ -0.91
VPS25-202ENST00000589219 TMEM168Q9H0V1 697 aa9.36□□□□□ -0.91
VPS25-202ENST00000589219 CACYBPQ9HB71 228 aaKnown RBP9.36□□□□□ -0.91
VPS25-202ENST00000589219 ACOT13Q9NPJ3 140 aa9.36□□□□□ -0.91
VPS25-202ENST00000589219 NECTIN3Q9NQS3 549 aa9.36□□□□□ -0.91
VPS25-202ENST00000589219 FKBP14Q9NWM8 211 aa9.36□□□□□ -0.91
VPS25-202ENST00000589219 MS4A12Q9NXJ0 267 aa9.36□□□□□ -0.91
VPS25-202ENST00000589219 PSORS1C1Q9UIG5 152 aa9.36□□□□□ -0.91
VPS25-202ENST00000589219 PILRBQ9UKJ0 227 aa9.36□□□□□ -0.91
VPS25-202ENST00000589219 FBXW2Q9UKT8 454 aa9.36□□□□□ -0.91
VPS25-202ENST00000589219 SLC6A14Q9UN76 642 aa9.36□□□□□ -0.91
VPS25-202ENST00000589219 CA5BQ9Y2D0 317 aa9.36□□□□□ -0.91
VPS25-202ENST00000589219 SPACA6W5XKT8 324 aa9.36□□□□□ -0.91
VPS25-202ENST00000589219 KMT2BQ9UMN6 2715 aaPredicted RBP9.36□□□□□ -0.91
VPS25-202ENST00000589219 MAP1BP46821 2468 aaKnown RBP9.36□□□□□ -0.91
VPS25-202ENST00000589219 CHD8Q9HCK8 2581 aa9.35□□□□□ -0.91
VPS25-202ENST00000589219 DSPPQ9NZW4 1301 aa9.35□□□□□ -0.91
VPS25-202ENST00000589219 ASCC3Q8N3C0 2202 aaKnown RBP9.35□□□□□ -0.91
VPS25-202ENST00000589219 A0A0J9YY10 115 aa9.35□□□□□ -0.91
VPS25-202ENST00000589219 A0A1W2PRQ8 180 aa9.35□□□□□ -0.91
VPS25-202ENST00000589219 GSAPA4D1B5 854 aa9.35□□□□□ -0.91
VPS25-202ENST00000589219 EFCAB10A6NFE3 127 aa9.35□□□□□ -0.91
VPS25-202ENST00000589219 PCDH17O14917 1159 aa9.35□□□□□ -0.91
VPS25-202ENST00000589219 B3GALT2O43825 422 aa9.35□□□□□ -0.91
VPS25-202ENST00000589219 PRKRAO75569 313 aaKnown RBP9.35□□□□□ -0.91
VPS25-202ENST00000589219 INMTO95050 263 aa9.35□□□□□ -0.91
VPS25-202ENST00000589219 FADS2O95864 444 aaKnown RBP9.35□□□□□ -0.91
VPS25-202ENST00000589219 STATHP02808 62 aa9.35□□□□□ -0.91
VPS25-202ENST00000589219 CFIP05156 583 aa9.35□□□□□ -0.91
VPS25-202ENST00000589219 ZNF888P0CJ79 500 aaPredicted RBP9.35□□□□□ -0.91
VPS25-202ENST00000589219 SMIM10L1P0DMW3 83 aa9.35□□□□□ -0.91
VPS25-202ENST00000589219 OSMP13725 252 aa9.35□□□□□ -0.91
VPS25-202ENST00000589219 GABRB1P18505 474 aa9.35□□□□□ -0.91
VPS25-202ENST00000589219 MAGP20916 626 aa9.35□□□□□ -0.91
VPS25-202ENST00000589219 CPN2P22792 545 aa9.35□□□□□ -0.91
VPS25-202ENST00000589219 PSMB9P28065 219 aa9.35□□□□□ -0.91
VPS25-202ENST00000589219 TLX1P31314 330 aaPredicted RBP9.35□□□□□ -0.91
VPS25-202ENST00000589219 MAPK10P53779 464 aa9.35□□□□□ -0.91
VPS25-202ENST00000589219 CRISP1P54107 249 aa9.35□□□□□ -0.91
VPS25-202ENST00000589219 LIM2P55344 173 aa9.35□□□□□ -0.91
VPS25-202ENST00000589219 RAB8AP61006 207 aa9.35□□□□□ -0.91
VPS25-202ENST00000589219 UBE2IP63279 158 aaKnown RBP9.35□□□□□ -0.91
VPS25-202ENST00000589219 BTN3A2P78410 334 aa9.35□□□□□ -0.91
VPS25-202ENST00000589219 ALDH6A1Q02252 535 aaKnown RBP9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms