RNA–Protein interactions for RNA: ENST00000575049.1

TSR1-203, Transcript of TSR1, ribosome maturation factor, humanhuman

TSL 3

Gene TSR1, Length 387 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSR1-203ENST00000575049 PRKACAP17612 351 aa4.5□□□□□ -1.69
TSR1-203ENST00000575049 TCP1P17987 556 aaKnown RBP4.5□□□□□ -1.69
TSR1-203ENST00000575049 CERS1P27544 350 aa4.5□□□□□ -1.69
TSR1-203ENST00000575049 MPGP29372 298 aa4.5□□□□□ -1.69
TSR1-203ENST00000575049 CYLC1P35663 651 aaPredicted RBP4.5□□□□□ -1.69
TSR1-203ENST00000575049 PGGT1BP53609 377 aa4.5□□□□□ -1.69
TSR1-203ENST00000575049 GEMP55040 296 aa4.5□□□□□ -1.69
TSR1-203ENST00000575049 MAZP56270 477 aaKnown RBP4.5□□□□□ -1.69
TSR1-203ENST00000575049 SLC8A3P57103 927 aa4.5□□□□□ -1.69
TSR1-203ENST00000575049 IRX1P78414 480 aaPredicted RBP4.5□□□□□ -1.69
TSR1-203ENST00000575049 EEF1A2Q05639 463 aaKnown RBP4.5□□□□□ -1.69
TSR1-203ENST00000575049 ENPEPQ07075 957 aa4.5□□□□□ -1.69
TSR1-203ENST00000575049 IFFO1Q0D2I5 559 aa4.5□□□□□ -1.69
TSR1-203ENST00000575049 NME3Q13232 169 aa4.5□□□□□ -1.69
TSR1-203ENST00000575049 DHX34Q14147 1143 aaKnown RBP4.5□□□□□ -1.69
TSR1-203ENST00000575049 ALX1Q15699 326 aa4.5□□□□□ -1.69
TSR1-203ENST00000575049 TTMPQ5BVD1 217 aa4.5□□□□□ -1.69
TSR1-203ENST00000575049 PPP6R3Q5H9R7 873 aaPredicted RBP4.5□□□□□ -1.69
TSR1-203ENST00000575049 CEP78Q5JTW2 689 aa4.5□□□□□ -1.69
TSR1-203ENST00000575049 ELFN2Q5R3F8 820 aa4.5□□□□□ -1.69
TSR1-203ENST00000575049 TMEM225Q6GV28 225 aa4.5□□□□□ -1.69
TSR1-203ENST00000575049 TTC27Q6P3X3 843 aa4.5□□□□□ -1.69
TSR1-203ENST00000575049 Q6ZPB1 254 aaPredicted RBP4.5□□□□□ -1.69
TSR1-203ENST00000575049 COPS6Q7L5N1 327 aa4.5□□□□□ -1.69
TSR1-203ENST00000575049 CPEB2Q7Z5Q1 589 aaKnown RBP4.5□□□□□ -1.69
TSR1-203ENST00000575049 ERO1BQ86YB8 467 aa4.5□□□□□ -1.69
TSR1-203ENST00000575049 HIST2H2ABQ8IUE6 130 aaPredicted RBP4.5□□□□□ -1.69
TSR1-203ENST00000575049 CCDC36Q8IYA8 594 aa4.5□□□□□ -1.69
TSR1-203ENST00000575049 IQCKQ8N0W5 287 aa4.5□□□□□ -1.69
TSR1-203ENST00000575049 ZNF548Q8NEK5 533 aaPredicted RBP4.5□□□□□ -1.69
TSR1-203ENST00000575049 OR13J1Q8NGT2 312 aa4.5□□□□□ -1.69
TSR1-203ENST00000575049 OR52I2Q8NH67 350 aa4.5□□□□□ -1.69
TSR1-203ENST00000575049 OR5R1Q8NH85 324 aa4.5□□□□□ -1.69
TSR1-203ENST00000575049 FGFBP3Q8TAT2 258 aa4.5□□□□□ -1.69
TSR1-203ENST00000575049 FAM81AQ8TBF8 368 aa4.5□□□□□ -1.69
TSR1-203ENST00000575049 RNF128Q8TEB7 428 aa4.5□□□□□ -1.69
TSR1-203ENST00000575049 ZNF473Q8WTR7 871 aaKnown RBP4.5□□□□□ -1.69
TSR1-203ENST00000575049 OR1E3Q8WZA6 343 aa4.5□□□□□ -1.69
TSR1-203ENST00000575049 SEPT8Q92599 483 aa4.5□□□□□ -1.69
TSR1-203ENST00000575049 LPAR1Q92633 364 aa4.5□□□□□ -1.69
TSR1-203ENST00000575049 P3H4Q92791 437 aa4.5□□□□□ -1.69
TSR1-203ENST00000575049 RPL3LQ92901 407 aaKnown RBP4.5□□□□□ -1.69
TSR1-203ENST00000575049 HIST1H2ACQ93077 130 aa4.5□□□□□ -1.69
TSR1-203ENST00000575049 CXorf58Q96LI9 332 aa4.5□□□□□ -1.69
TSR1-203ENST00000575049 SGK494Q96LW2 274 aa4.5□□□□□ -1.69
TSR1-203ENST00000575049 VSTM2LQ96N03 204 aa4.5□□□□□ -1.69
TSR1-203ENST00000575049 SIGLEC11Q96RL6 698 aa4.5□□□□□ -1.69
TSR1-203ENST00000575049 TDRD1Q9BXT4 1180 aaKnown RBP4.5□□□□□ -1.69
TSR1-203ENST00000575049 TRIM9Q9C026 710 aa4.5□□□□□ -1.69
TSR1-203ENST00000575049 RAB18Q9NP72 206 aa4.5□□□□□ -1.69
TSR1-203ENST00000575049 MIOSQ9NXC5 875 aa4.5□□□□□ -1.69
TSR1-203ENST00000575049 LHX3Q9UBR4 397 aa4.5□□□□□ -1.69
TSR1-203ENST00000575049 ANGPTL2Q9UKU9 493 aa4.5□□□□□ -1.69
TSR1-203ENST00000575049 SNX12Q9UMY4 172 aa4.5□□□□□ -1.69
TSR1-203ENST00000575049 YIPF1Q9Y548 306 aa4.5□□□□□ -1.69
TSR1-203ENST00000575049 TNRQ92752 1358 aa4.5□□□□□ -1.69
TSR1-203ENST00000575049 DISP2A7MBM2 1401 aa4.49□□□□□ -1.69
TSR1-203ENST00000575049 ATRNO75882 1429 aa4.49□□□□□ -1.69
TSR1-203ENST00000575049 ADAMTS7Q9UKP4 1686 aa4.49□□□□□ -1.69
TSR1-203ENST00000575049 C2CD4BA6NLJ0 364 aa4.49□□□□□ -1.69
TSR1-203ENST00000575049 A6NNC1 897 aa4.49□□□□□ -1.69
TSR1-203ENST00000575049 GABRR3A8MPY1 467 aa4.49□□□□□ -1.69
TSR1-203ENST00000575049 H0YHG0 523 aa4.49□□□□□ -1.69
TSR1-203ENST00000575049 GOLGA8TH3BQL2 631 aa4.49□□□□□ -1.69
TSR1-203ENST00000575049 CLN5O75503 358 aa4.49□□□□□ -1.69
TSR1-203ENST00000575049 UPK3AO75631 287 aa4.49□□□□□ -1.69
TSR1-203ENST00000575049 TXNDC12O95881 172 aa4.49□□□□□ -1.69
TSR1-203ENST00000575049 FAM107AO95990 144 aa4.49□□□□□ -1.69
TSR1-203ENST00000575049 CT45A8P0DMV1 189 aa4.49□□□□□ -1.69
TSR1-203ENST00000575049 CT45A9P0DMV2 189 aa4.49□□□□□ -1.69
TSR1-203ENST00000575049 TROVE2P10155 538 aaKnown RBP eCLIP4.49□□□□□ -1.69
TSR1-203ENST00000575049 CYP19A1P11511 503 aaPredicted RBP4.49□□□□□ -1.69
TSR1-203ENST00000575049 CYP11B1P15538 503 aa4.49□□□□□ -1.69
TSR1-203ENST00000575049 AMD1P17707 334 aa4.49□□□□□ -1.69
TSR1-203ENST00000575049 SRMP19623 302 aa4.49□□□□□ -1.69
TSR1-203ENST00000575049 NT5EP21589 574 aa4.49□□□□□ -1.69
TSR1-203ENST00000575049 HNRNPH3P31942 346 aaKnown RBP4.49□□□□□ -1.69
TSR1-203ENST00000575049 FDFT1P37268 417 aa4.49□□□□□ -1.69
TSR1-203ENST00000575049 VAMP7P51809 220 aa4.49□□□□□ -1.69
TSR1-203ENST00000575049 CDH4P55283 916 aa4.49□□□□□ -1.69
TSR1-203ENST00000575049 RPS15P62841 145 aaKnown RBP4.49□□□□□ -1.69
TSR1-203ENST00000575049 GABPAQ06546 454 aa4.49□□□□□ -1.69
TSR1-203ENST00000575049 TMEM132DQ14C87 1099 aa4.49□□□□□ -1.69
TSR1-203ENST00000575049 EXOSC7Q15024 291 aaKnown RBP4.49□□□□□ -1.69
TSR1-203ENST00000575049 SPHARQ15513 63 aa4.49□□□□□ -1.69
TSR1-203ENST00000575049 SNCBQ16143 134 aa4.49□□□□□ -1.69
TSR1-203ENST00000575049 ALKBH6Q3KRA9 238 aa4.49□□□□□ -1.69
TSR1-203ENST00000575049 HSP90AA4PQ58FG1 418 aa4.49□□□□□ -1.69
TSR1-203ENST00000575049 CT45A2Q5DJT8 189 aa4.49□□□□□ -1.69
TSR1-203ENST00000575049 CTSL3PQ5NE16 218 aa4.49□□□□□ -1.69
TSR1-203ENST00000575049 CEP85LQ5SZL2 805 aa4.49□□□□□ -1.69
TSR1-203ENST00000575049 ZNF658Q5TYW1 1059 aaPredicted RBP4.49□□□□□ -1.69
TSR1-203ENST00000575049 WDR59Q6PJI9 974 aa4.49□□□□□ -1.69
TSR1-203ENST00000575049 DEGS2Q6QHC5 323 aa4.49□□□□□ -1.69
TSR1-203ENST00000575049 TRMT1LQ7Z2T5 733 aaKnown RBP4.49□□□□□ -1.69
TSR1-203ENST00000575049 KIAA1328Q86T90 577 aa4.49□□□□□ -1.69
TSR1-203ENST00000575049 LUZP2Q86TE4 346 aa4.49□□□□□ -1.69
TSR1-203ENST00000575049 GPSM1Q86YR5 675 aa4.49□□□□□ -1.69
TSR1-203ENST00000575049 MMD2Q8IY49 270 aa4.49□□□□□ -1.69
TSR1-203ENST00000575049 LGI2Q8N0V4 545 aa4.49□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms