RNA–Protein interactions for RNA: ENST00000563672.5

CMTM3-206, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 4

Gene CMTM3, Length 460 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-206ENST00000563672 G3V3Y1 287 aa18.67■□□□□ 0.58
CMTM3-206ENST00000563672 TO15178 435 aa18.67■□□□□ 0.58
CMTM3-206ENST00000563672 ACOX3O15254 700 aa18.67■□□□□ 0.58
CMTM3-206ENST00000563672 ASNA1O43681 348 aa18.67■□□□□ 0.58
CMTM3-206ENST00000563672 SNNO75324 88 aaPredicted RBP18.67■□□□□ 0.58
CMTM3-206ENST00000563672 P04436 131 aa18.67■□□□□ 0.58
CMTM3-206ENST00000563672 STSP08842 583 aa18.67■□□□□ 0.58
CMTM3-206ENST00000563672 PRPS2P11908 318 aa18.67■□□□□ 0.58
CMTM3-206ENST00000563672 NAGAP17050 411 aa18.67■□□□□ 0.58
CMTM3-206ENST00000563672 NRG3P56975 720 aa18.67■□□□□ 0.58
CMTM3-206ENST00000563672 FOXO1Q12778 655 aa18.67■□□□□ 0.58
CMTM3-206ENST00000563672 SMU1Q2TAY7 513 aa18.67■□□□□ 0.58
CMTM3-206ENST00000563672 IL23RQ5VWK5 629 aa18.67■□□□□ 0.58
CMTM3-206ENST00000563672 BNC2Q6ZN30 1099 aaPredicted RBP18.67■□□□□ 0.58
CMTM3-206ENST00000563672 LIX1Q8N485 282 aa18.67■□□□□ 0.58
CMTM3-206ENST00000563672 FNDC5Q8NAU1 212 aa18.67■□□□□ 0.58
CMTM3-206ENST00000563672 RAB3IL1Q8TBN0 382 aa18.67■□□□□ 0.58
CMTM3-206ENST00000563672 PPCDCQ96CD2 204 aa18.67■□□□□ 0.58
CMTM3-206ENST00000563672 HSPBAP1Q96EW2 488 aa18.67■□□□□ 0.58
CMTM3-206ENST00000563672 ATP6V1G3Q96LB4 118 aa18.67■□□□□ 0.58
CMTM3-206ENST00000563672 VSTM2LQ96N03 204 aa18.67■□□□□ 0.58
CMTM3-206ENST00000563672 SH3GL2Q99962 352 aa18.67■□□□□ 0.58
CMTM3-206ENST00000563672 C1orf50Q9BV19 199 aa18.67■□□□□ 0.58
CMTM3-206ENST00000563672 VIPAS39Q9H9C1 493 aa18.67■□□□□ 0.58
CMTM3-206ENST00000563672 PROK2Q9HC23 129 aa18.67■□□□□ 0.58
CMTM3-206ENST00000563672 PNPOQ9NVS9 261 aa18.67■□□□□ 0.58
CMTM3-206ENST00000563672 THAP1Q9NVV9 213 aa18.67■□□□□ 0.58
CMTM3-206ENST00000563672 ATP6V1HQ9UI12 483 aa18.67■□□□□ 0.58
CMTM3-206ENST00000563672 CNOT11Q9UKZ1 510 aaKnown RBP18.67■□□□□ 0.58
CMTM3-206ENST00000563672 GPR55Q9Y2T6 319 aaPredicted RBP18.67■□□□□ 0.58
CMTM3-206ENST00000563672 ASH1LQ9NR48 2969 aaKnown RBP18.66■□□□□ 0.58
CMTM3-206ENST00000563672 PDPK1O15530 556 aa18.66■□□□□ 0.58
CMTM3-206ENST00000563672 GLSO94925 669 aaPredicted RBP18.66■□□□□ 0.58
CMTM3-206ENST00000563672 IFI6P09912 130 aa18.66■□□□□ 0.58
CMTM3-206ENST00000563672 ABCD3P28288 659 aa18.66■□□□□ 0.58
CMTM3-206ENST00000563672 PIGAP37287 484 aa18.66■□□□□ 0.58
CMTM3-206ENST00000563672 MC3RP41968 323 aa18.66■□□□□ 0.58
CMTM3-206ENST00000563672 FRKP42685 505 aaPredicted RBP18.66■□□□□ 0.58
CMTM3-206ENST00000563672 FBXW4P57775 412 aa18.66■□□□□ 0.58
CMTM3-206ENST00000563672 EMX2Q04743 252 aa18.66■□□□□ 0.58
CMTM3-206ENST00000563672 RPS6KA2Q15349 733 aa18.66■□□□□ 0.58
CMTM3-206ENST00000563672 GK5Q6ZS86 529 aa18.66■□□□□ 0.58
CMTM3-206ENST00000563672 FAM47EQ6ZV65 393 aa18.66■□□□□ 0.58
CMTM3-206ENST00000563672 ZGRF1Q86YA3 2104 aa18.66■□□□□ 0.58
CMTM3-206ENST00000563672 PRR22Q8IZ63 422 aa18.66■□□□□ 0.58
CMTM3-206ENST00000563672 FBXW8Q8N3Y1 598 aa18.66■□□□□ 0.58
CMTM3-206ENST00000563672 FAM13CQ8NE31 585 aa18.66■□□□□ 0.58
CMTM3-206ENST00000563672 ELP4Q96EB1 424 aa18.66■□□□□ 0.58
CMTM3-206ENST00000563672 BTBD9Q96Q07 612 aa18.66■□□□□ 0.58
CMTM3-206ENST00000563672 AKTIPQ9H8T0 292 aa18.66■□□□□ 0.58
CMTM3-206ENST00000563672 SH3BP4Q9P0V3 963 aa18.66■□□□□ 0.58
CMTM3-206ENST00000563672 C19orf53Q9UNZ5 99 aaPredicted RBP18.66■□□□□ 0.58
CMTM3-206ENST00000563672 USP9YO00507 2555 aaPredicted RBP18.65■□□□□ 0.58
CMTM3-206ENST00000563672 ANKRD33BA6NCL7 494 aa18.65■□□□□ 0.58
CMTM3-206ENST00000563672 FRG2CA6NGY1 282 aa18.65■□□□□ 0.58
CMTM3-206ENST00000563672 UPK1AO00322 258 aa18.65■□□□□ 0.58
CMTM3-206ENST00000563672 TP53I11O14683 189 aa18.65■□□□□ 0.58
CMTM3-206ENST00000563672 TFECO14948 347 aaPredicted RBP18.65■□□□□ 0.58
CMTM3-206ENST00000563672 HS6ST1O60243 411 aa18.65■□□□□ 0.58
CMTM3-206ENST00000563672 NME6O75414 186 aaPredicted RBP18.65■□□□□ 0.58
CMTM3-206ENST00000563672 AGFG2O95081 481 aa18.65■□□□□ 0.58
CMTM3-206ENST00000563672 PSMG1O95456 288 aa18.65■□□□□ 0.58
CMTM3-206ENST00000563672 ABCB1P08183 1280 aaPredicted RBP18.65■□□□□ 0.58
CMTM3-206ENST00000563672 DNASE1L1P49184 302 aa18.65■□□□□ 0.58
CMTM3-206ENST00000563672 TMED10P49755 219 aaKnown RBP18.65■□□□□ 0.58
CMTM3-206ENST00000563672 MAD2L1Q13257 205 aaPredicted RBP18.65■□□□□ 0.58
CMTM3-206ENST00000563672 PTGR1Q14914 329 aa18.65■□□□□ 0.58
CMTM3-206ENST00000563672 NNATQ16517 81 aa18.65■□□□□ 0.58
CMTM3-206ENST00000563672 HYAL4Q2M3T9 481 aa18.65■□□□□ 0.58
CMTM3-206ENST00000563672 TTMPQ5BVD1 217 aa18.65■□□□□ 0.58
CMTM3-206ENST00000563672 CMPK2Q5EBM0 449 aa18.65■□□□□ 0.58
CMTM3-206ENST00000563672 ATG16L1Q676U5 607 aa18.65■□□□□ 0.58
CMTM3-206ENST00000563672 TMEM107Q6UX40 140 aa18.65■□□□□ 0.58
CMTM3-206ENST00000563672 RGS9BPQ6ZS82 235 aa18.65■□□□□ 0.58
CMTM3-206ENST00000563672 ZNF551Q7Z340 670 aaPredicted RBP18.65■□□□□ 0.58
CMTM3-206ENST00000563672 R3HCC1LQ7Z5L2 792 aaKnown RBP18.65■□□□□ 0.58
CMTM3-206ENST00000563672 CHERPQ8IWX8 916 aaKnown RBP18.65■□□□□ 0.58
CMTM3-206ENST00000563672 TRIM42Q8IWZ5 723 aa18.65■□□□□ 0.58
CMTM3-206ENST00000563672 OR2L13Q8N349 312 aa18.65■□□□□ 0.58
CMTM3-206ENST00000563672 OR5M3Q8NGP4 307 aa18.65■□□□□ 0.58
CMTM3-206ENST00000563672 CIDECQ96AQ7 238 aaPredicted RBP18.65■□□□□ 0.58
CMTM3-206ENST00000563672 SECISBP2Q96T21 854 aaKnown RBP18.65■□□□□ 0.58
CMTM3-206ENST00000563672 TTTY12Q9BZ98 90 aa18.65■□□□□ 0.58
CMTM3-206ENST00000563672 IL1RL2Q9HB29 575 aa18.65■□□□□ 0.58
CMTM3-206ENST00000563672 FOLH1BQ9HBA9 442 aa18.65■□□□□ 0.58
CMTM3-206ENST00000563672 ACSS1Q9NUB1 689 aaPredicted RBP18.65■□□□□ 0.58
CMTM3-206ENST00000563672 ASIC5Q9NY37 505 aa18.65■□□□□ 0.58
CMTM3-206ENST00000563672 TAS2R9Q9NYW1 312 aa18.65■□□□□ 0.58
CMTM3-206ENST00000563672 ERRFI1Q9UJM3 462 aaPredicted RBP18.65■□□□□ 0.58
CMTM3-206ENST00000563672 EIF3LQ9Y262 564 aaKnown RBP18.65■□□□□ 0.58
CMTM3-206ENST00000563672 SLC5A6Q9Y289 635 aa18.65■□□□□ 0.58
CMTM3-206ENST00000563672 PTPN13Q12923 2485 aa18.65■□□□□ 0.58
CMTM3-206ENST00000563672 COL12A1Q99715 3063 aa18.65■□□□□ 0.58
CMTM3-206ENST00000563672 HECTD1Q9ULT8 2610 aa18.64■□□□□ 0.57
CMTM3-206ENST00000563672 SCAMP2O15127 329 aaKnown RBP18.64■□□□□ 0.57
CMTM3-206ENST00000563672 PPM1BO75688 479 aa18.64■□□□□ 0.57
CMTM3-206ENST00000563672 CT45A8P0DMV1 189 aa18.64■□□□□ 0.57
CMTM3-206ENST00000563672 CT45A9P0DMV2 189 aa18.64■□□□□ 0.57
CMTM3-206ENST00000563672 HPCAL1P37235 193 aa18.64■□□□□ 0.57
CMTM3-206ENST00000563672 RPL3P39023 403 aaKnown RBP18.64■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms