RNA–Protein interactions for RNA: ENST00000562722.1

SF3B3-202, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 881 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-202ENST00000562722 PRAMEF25A6NGN4 478 aa11.83□□□□□ -0.52
SF3B3-202ENST00000562722 SNPHO15079 494 aa11.83□□□□□ -0.52
SF3B3-202ENST00000562722 ICOSLGO75144 302 aa11.83□□□□□ -0.52
SF3B3-202ENST00000562722 SMIM24O75264 130 aa11.83□□□□□ -0.52
SF3B3-202ENST00000562722 IL18BPO95998 194 aa11.83□□□□□ -0.52
SF3B3-202ENST00000562722 NAGAP17050 411 aa11.83□□□□□ -0.52
SF3B3-202ENST00000562722 PHBP35232 272 aa11.83□□□□□ -0.52
SF3B3-202ENST00000562722 ALDH9A1P49189 494 aa11.83□□□□□ -0.52
SF3B3-202ENST00000562722 FOXF2Q12947 444 aa11.83□□□□□ -0.52
SF3B3-202ENST00000562722 TRADDQ15628 312 aa11.83□□□□□ -0.52
SF3B3-202ENST00000562722 TECRLQ5HYJ1 363 aa11.83□□□□□ -0.52
SF3B3-202ENST00000562722 DESI1Q6ICB0 168 aa11.83□□□□□ -0.52
SF3B3-202ENST00000562722 SLC48A1Q6P1K1 146 aa11.83□□□□□ -0.52
SF3B3-202ENST00000562722 METTL2BQ6P1Q9 378 aaKnown RBP11.83□□□□□ -0.52
SF3B3-202ENST00000562722 FAM111BQ6SJ93 734 aa11.83□□□□□ -0.52
SF3B3-202ENST00000562722 ENPP6Q6UWR7 440 aa11.83□□□□□ -0.52
SF3B3-202ENST00000562722 ZDHHC24Q6UX98 284 aa11.83□□□□□ -0.52
SF3B3-202ENST00000562722 NUP54Q7Z3B4 507 aa11.83□□□□□ -0.52
SF3B3-202ENST00000562722 COMMD6Q7Z4G1 85 aa11.83□□□□□ -0.52
SF3B3-202ENST00000562722 ZPLD1Q8TCW7 415 aa11.83□□□□□ -0.52
SF3B3-202ENST00000562722 INTS12Q96CB8 462 aaKnown RBP11.83□□□□□ -0.52
SF3B3-202ENST00000562722 KLHL29Q96CT2 875 aa11.83□□□□□ -0.52
SF3B3-202ENST00000562722 LCORQ96JN0 433 aaPredicted RBP11.83□□□□□ -0.52
SF3B3-202ENST00000562722 NODALQ96S42 347 aa11.83□□□□□ -0.52
SF3B3-202ENST00000562722 TM9SF2Q99805 663 aa11.83□□□□□ -0.52
SF3B3-202ENST00000562722 TUBA1CQ9BQE3 449 aa11.83□□□□□ -0.52
SF3B3-202ENST00000562722 SFXN3Q9BWM7 321 aa11.83□□□□□ -0.52
SF3B3-202ENST00000562722 DLL4Q9NR61 685 aa11.83□□□□□ -0.52
SF3B3-202ENST00000562722 GALNT8Q9NY28 637 aa11.83□□□□□ -0.52
SF3B3-202ENST00000562722 PSME2Q9UL46 239 aa11.83□□□□□ -0.52
SF3B3-202ENST00000562722 PYCARDQ9ULZ3 195 aa11.83□□□□□ -0.52
SF3B3-202ENST00000562722 PCDHA9Q9Y5H5 950 aa11.83□□□□□ -0.52
SF3B3-202ENST00000562722 ESYT3A0FGR9 886 aa11.82□□□□□ -0.52
SF3B3-202ENST00000562722 HMX2A2RU54 273 aa11.82□□□□□ -0.52
SF3B3-202ENST00000562722 SH3D21A4FU49 640 aa11.82□□□□□ -0.52
SF3B3-202ENST00000562722 CASKO14936 926 aa11.82□□□□□ -0.52
SF3B3-202ENST00000562722 ACOX3O15254 700 aa11.82□□□□□ -0.52
SF3B3-202ENST00000562722 CBR3O75828 277 aa11.82□□□□□ -0.52
SF3B3-202ENST00000562722 ESRRBO95718 433 aa11.82□□□□□ -0.52
SF3B3-202ENST00000562722 ALDOAP04075 364 aaKnown RBP11.82□□□□□ -0.52
SF3B3-202ENST00000562722 RBP1P09455 135 aa11.82□□□□□ -0.52
SF3B3-202ENST00000562722 RHOXF2BP0C7M4 288 aa11.82□□□□□ -0.52
SF3B3-202ENST00000562722 CSNK2A2P19784 350 aaPredicted RBP11.82□□□□□ -0.52
SF3B3-202ENST00000562722 S1PR1P21453 382 aa11.82□□□□□ -0.52
SF3B3-202ENST00000562722 TCEA1P23193 301 aaKnown RBP11.82□□□□□ -0.52
SF3B3-202ENST00000562722 ADSLP30566 484 aaPredicted RBP11.82□□□□□ -0.52
SF3B3-202ENST00000562722 SOX18P35713 384 aa11.82□□□□□ -0.52
SF3B3-202ENST00000562722 CPOXP36551 454 aa11.82□□□□□ -0.52
SF3B3-202ENST00000562722 SLCO1A2P46721 670 aa11.82□□□□□ -0.52
SF3B3-202ENST00000562722 DCAF7P61962 342 aa11.82□□□□□ -0.52
SF3B3-202ENST00000562722 SNTA1Q13424 505 aa11.82□□□□□ -0.52
SF3B3-202ENST00000562722 PRICKLE4Q2TBC4 344 aa11.82□□□□□ -0.52
SF3B3-202ENST00000562722 C10orf62Q5T681 223 aaPredicted RBP11.82□□□□□ -0.52
SF3B3-202ENST00000562722 Q71RC1 249 aaPredicted RBP11.82□□□□□ -0.52
SF3B3-202ENST00000562722 MILR1Q7Z6M3 343 aa11.82□□□□□ -0.52
SF3B3-202ENST00000562722 BIVMQ86UB2 503 aa11.82□□□□□ -0.52
SF3B3-202ENST00000562722 IFNEQ86WN2 208 aa11.82□□□□□ -0.52
SF3B3-202ENST00000562722 GCNT2Q8N0V5 402 aa11.82□□□□□ -0.52
SF3B3-202ENST00000562722 METTL4Q8N3J2 472 aa11.82□□□□□ -0.52
SF3B3-202ENST00000562722 OR52R1Q8NGF1 315 aa11.82□□□□□ -0.52
SF3B3-202ENST00000562722 ANP32BQ92688 251 aaKnown RBP11.82□□□□□ -0.52
SF3B3-202ENST00000562722 HGDQ93099 445 aa11.82□□□□□ -0.52
SF3B3-202ENST00000562722 TMCO6Q96DC7 493 aa11.82□□□□□ -0.52
SF3B3-202ENST00000562722 DACH2Q96NX9 599 aa11.82□□□□□ -0.52
SF3B3-202ENST00000562722 NSUN5Q96P11 429 aaKnown RBP11.82□□□□□ -0.52
SF3B3-202ENST00000562722 GPR78Q96P69 363 aa11.82□□□□□ -0.52
SF3B3-202ENST00000562722 FAIM2Q9BWQ8 316 aa11.82□□□□□ -0.52
SF3B3-202ENST00000562722 ACBD3Q9H3P7 528 aa11.82□□□□□ -0.52
SF3B3-202ENST00000562722 PLEKHF2Q9H8W4 249 aa11.82□□□□□ -0.52
SF3B3-202ENST00000562722 TAS2R10Q9NYW0 307 aa11.82□□□□□ -0.52
SF3B3-202ENST00000562722 MAT2BQ9NZL9 334 aa11.82□□□□□ -0.52
SF3B3-202ENST00000562722 JKAMPQ9P055 326 aa11.82□□□□□ -0.52
SF3B3-202ENST00000562722 PRODH2Q9UF12 536 aa11.82□□□□□ -0.52
SF3B3-202ENST00000562722 FETUBQ9UGM5 382 aa11.82□□□□□ -0.52
SF3B3-202ENST00000562722 PCTPQ9UKL6 214 aa11.82□□□□□ -0.52
SF3B3-202ENST00000562722 TMCO1Q9UM00 188 aa11.82□□□□□ -0.52
SF3B3-202ENST00000562722 EIF3LQ9Y262 564 aaKnown RBP11.82□□□□□ -0.52
SF3B3-202ENST00000562722 RPH3AQ9Y2J0 694 aaPredicted RBP11.82□□□□□ -0.52
SF3B3-202ENST00000562722 PLLPQ9Y342 182 aa11.82□□□□□ -0.52
SF3B3-202ENST00000562722 ZNF780BQ9Y6R6 833 aa11.82□□□□□ -0.52
SF3B3-202ENST00000562722 UGT2B11O75310 529 aa11.81□□□□□ -0.52
SF3B3-202ENST00000562722 REM1O75628 298 aa11.81□□□□□ -0.52
SF3B3-202ENST00000562722 GOSR1O95249 250 aa11.81□□□□□ -0.52
SF3B3-202ENST00000562722 HRGP04196 525 aa11.81□□□□□ -0.52
SF3B3-202ENST00000562722 ATP1B1P05026 303 aa11.81□□□□□ -0.52
SF3B3-202ENST00000562722 CPN1P15169 458 aa11.81□□□□□ -0.52
SF3B3-202ENST00000562722 PCSK2P16519 638 aa11.81□□□□□ -0.52
SF3B3-202ENST00000562722 CASQ1P31415 396 aa11.81□□□□□ -0.52
SF3B3-202ENST00000562722 DIO3P55073 304 aa11.81□□□□□ -0.52
SF3B3-202ENST00000562722 MAP4K2Q12851 820 aa11.81□□□□□ -0.52
SF3B3-202ENST00000562722 TRAF3Q13114 568 aa11.81□□□□□ -0.52
SF3B3-202ENST00000562722 LTB4RQ15722 352 aa11.81□□□□□ -0.52
SF3B3-202ENST00000562722 FAM180BQ6P0A1 224 aa11.81□□□□□ -0.52
SF3B3-202ENST00000562722 AAGABQ6PD74 315 aa11.81□□□□□ -0.52
SF3B3-202ENST00000562722 SCIMPQ6UWF3 145 aa11.81□□□□□ -0.52
SF3B3-202ENST00000562722 PLXDC2Q6UX71 529 aa11.81□□□□□ -0.52
SF3B3-202ENST00000562722 P4HA3Q7Z4N8 544 aa11.81□□□□□ -0.52
SF3B3-202ENST00000562722 GRAMD2AQ8IUY3 354 aa11.81□□□□□ -0.52
SF3B3-202ENST00000562722 TRIM42Q8IWZ5 723 aa11.81□□□□□ -0.52
SF3B3-202ENST00000562722 PLD6Q8N2A8 252 aaKnown RBP11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms