RNA–Protein interactions for RNA: ENST00000560856.5

SNRPA1-213, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 4

Gene SNRPA1, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-213ENST00000560856 HLA-DQA1Q5Y7H0 255 aa14.06□□□□□ -0.16
SNRPA1-213ENST00000560856 SLC22A10Q63ZE4 541 aa14.06□□□□□ -0.16
SNRPA1-213ENST00000560856 ZNF551Q7Z340 670 aaPredicted RBP14.06□□□□□ -0.16
SNRPA1-213ENST00000560856 CHERPQ8IWX8 916 aaKnown RBP14.06□□□□□ -0.16
SNRPA1-213ENST00000560856 RIMKLAQ8IXN7 391 aa14.06□□□□□ -0.16
SNRPA1-213ENST00000560856 KIRREL3Q8IZU9 778 aa14.06□□□□□ -0.16
SNRPA1-213ENST00000560856 TAGAPQ8N103 731 aa14.06□□□□□ -0.16
SNRPA1-213ENST00000560856 FNDC5Q8NAU1 212 aa14.06□□□□□ -0.16
SNRPA1-213ENST00000560856 FAM98AQ8NCA5 519 aaKnown RBP14.06□□□□□ -0.16
SNRPA1-213ENST00000560856 OR10G3Q8NGC4 313 aa14.06□□□□□ -0.16
SNRPA1-213ENST00000560856 RAB3IL1Q8TBN0 382 aa14.06□□□□□ -0.16
SNRPA1-213ENST00000560856 CIDECQ96AQ7 238 aaPredicted RBP14.06□□□□□ -0.16
SNRPA1-213ENST00000560856 MTERF3Q96E29 417 aa14.06□□□□□ -0.16
SNRPA1-213ENST00000560856 ELP4Q96EB1 424 aa14.06□□□□□ -0.16
SNRPA1-213ENST00000560856 LCORQ96JN0 433 aaPredicted RBP14.06□□□□□ -0.16
SNRPA1-213ENST00000560856 VSTM2LQ96N03 204 aa14.06□□□□□ -0.16
SNRPA1-213ENST00000560856 GPR137Q96N19 417 aa14.06□□□□□ -0.16
SNRPA1-213ENST00000560856 MANSC1Q9H8J5 431 aa14.06□□□□□ -0.16
SNRPA1-213ENST00000560856 PRODH2Q9UF12 536 aa14.06□□□□□ -0.16
SNRPA1-213ENST00000560856 CNOT11Q9UKZ1 510 aaKnown RBP14.06□□□□□ -0.16
SNRPA1-213ENST00000560856 C19orf53Q9UNZ5 99 aaPredicted RBP14.06□□□□□ -0.16
SNRPA1-213ENST00000560856 NINQ8N4C6 2090 aa14.06□□□□□ -0.16
SNRPA1-213ENST00000560856 PTPN13Q12923 2485 aa14.05□□□□□ -0.16
SNRPA1-213ENST00000560856 GTF3C1Q12789 2109 aa14.05□□□□□ -0.16
SNRPA1-213ENST00000560856 FLNBO75369 2602 aaKnown RBP14.05□□□□□ -0.16
SNRPA1-213ENST00000560856 ZNF407Q9C0G0 2248 aa14.05□□□□□ -0.16
SNRPA1-213ENST00000560856 NPIPA5E9PKD4 350 aa14.05□□□□□ -0.16
SNRPA1-213ENST00000560856 UPK1AO00322 258 aa14.05□□□□□ -0.16
SNRPA1-213ENST00000560856 KLF11O14901 512 aa14.05□□□□□ -0.16
SNRPA1-213ENST00000560856 SCAMP2O15127 329 aaKnown RBP14.05□□□□□ -0.16
SNRPA1-213ENST00000560856 TO15178 435 aa14.05□□□□□ -0.16
SNRPA1-213ENST00000560856 SEMA7AO75326 666 aa14.05□□□□□ -0.16
SNRPA1-213ENST00000560856 BCAS2O75934 225 aaPredicted RBP14.05□□□□□ -0.16
SNRPA1-213ENST00000560856 GLSO94925 669 aaPredicted RBP14.05□□□□□ -0.16
SNRPA1-213ENST00000560856 SLITRK5O94991 958 aa14.05□□□□□ -0.16
SNRPA1-213ENST00000560856 IFI6P09912 130 aa14.05□□□□□ -0.16
SNRPA1-213ENST00000560856 ABCD3P28288 659 aa14.05□□□□□ -0.16
SNRPA1-213ENST00000560856 NTSP30990 170 aa14.05□□□□□ -0.16
SNRPA1-213ENST00000560856 PIGAP37287 484 aa14.05□□□□□ -0.16
SNRPA1-213ENST00000560856 RFC3P40938 356 aa14.05□□□□□ -0.16
SNRPA1-213ENST00000560856 MC3RP41968 323 aa14.05□□□□□ -0.16
SNRPA1-213ENST00000560856 FBXW4P57775 412 aa14.05□□□□□ -0.16
SNRPA1-213ENST00000560856 C21orf58P58505 322 aa14.05□□□□□ -0.16
SNRPA1-213ENST00000560856 DCAF7P61962 342 aa14.05□□□□□ -0.16
SNRPA1-213ENST00000560856 NPSR1Q6W5P4 371 aa14.05□□□□□ -0.16
SNRPA1-213ENST00000560856 DND1Q8IYX4 353 aaKnown RBP14.05□□□□□ -0.16
SNRPA1-213ENST00000560856 OR2L13Q8N349 312 aa14.05□□□□□ -0.16
SNRPA1-213ENST00000560856 KRTCAP2Q8N6L1 136 aa14.05□□□□□ -0.16
SNRPA1-213ENST00000560856 OR7A2PQ8NGA2 310 aa14.05□□□□□ -0.16
SNRPA1-213ENST00000560856 ZNF75CPQ92670 426 aaPredicted RBP14.05□□□□□ -0.16
SNRPA1-213ENST00000560856 PPCDCQ96CD2 204 aa14.05□□□□□ -0.16
SNRPA1-213ENST00000560856 HSPBAP1Q96EW2 488 aa14.05□□□□□ -0.16
SNRPA1-213ENST00000560856 PPP1R36Q96LQ0 422 aa14.05□□□□□ -0.16
SNRPA1-213ENST00000560856 BTBD9Q96Q07 612 aa14.05□□□□□ -0.16
SNRPA1-213ENST00000560856 NUF2Q9BZD4 464 aa14.05□□□□□ -0.16
SNRPA1-213ENST00000560856 TSPAN10Q9H1Z9 355 aaPredicted RBP14.05□□□□□ -0.16
SNRPA1-213ENST00000560856 MEAF6Q9HAF1 191 aa14.05□□□□□ -0.16
SNRPA1-213ENST00000560856 SACM1LQ9NTJ5 587 aa14.05□□□□□ -0.16
SNRPA1-213ENST00000560856 SH3BP4Q9P0V3 963 aa14.05□□□□□ -0.16
SNRPA1-213ENST00000560856 NPIPA1Q9UND3 350 aa14.05□□□□□ -0.16
SNRPA1-213ENST00000560856 NUP214P35658 2090 aaPredicted RBP14.05□□□□□ -0.16
SNRPA1-213ENST00000560856 DIDO1Q9BTC0 2240 aaKnown RBP14.05□□□□□ -0.16
SNRPA1-213ENST00000560856 SPTAN1Q13813 2472 aaKnown RBP14.04□□□□□ -0.16
SNRPA1-213ENST00000560856 USP9YO00507 2555 aaPredicted RBP14.04□□□□□ -0.16
SNRPA1-213ENST00000560856 FRG2CA6NGY1 282 aa14.04□□□□□ -0.16
SNRPA1-213ENST00000560856 SDHDO14521 159 aa14.04□□□□□ -0.16
SNRPA1-213ENST00000560856 ACOX3O15254 700 aa14.04□□□□□ -0.16
SNRPA1-213ENST00000560856 PDPK1O15530 556 aa14.04□□□□□ -0.16
SNRPA1-213ENST00000560856 ASNA1O43681 348 aa14.04□□□□□ -0.16
SNRPA1-213ENST00000560856 UNC5CO95185 931 aa14.04□□□□□ -0.16
SNRPA1-213ENST00000560856 ABCB1P08183 1280 aaPredicted RBP14.04□□□□□ -0.16
SNRPA1-213ENST00000560856 LAMP1P11279 417 aa14.04□□□□□ -0.16
SNRPA1-213ENST00000560856 G6PDP11413 515 aa14.04□□□□□ -0.16
SNRPA1-213ENST00000560856 ZNF24P17028 368 aa14.04□□□□□ -0.16
SNRPA1-213ENST00000560856 NAGAP17050 411 aa14.04□□□□□ -0.16
SNRPA1-213ENST00000560856 DNASE1L1P49184 302 aa14.04□□□□□ -0.16
SNRPA1-213ENST00000560856 DIO3P55073 304 aa14.04□□□□□ -0.16
SNRPA1-213ENST00000560856 CORO7P57737 925 aa14.04□□□□□ -0.16
SNRPA1-213ENST00000560856 UBAP2LQ14157 1087 aaKnown RBP14.04□□□□□ -0.16
SNRPA1-213ENST00000560856 NNATQ16517 81 aa14.04□□□□□ -0.16
SNRPA1-213ENST00000560856 KRTCAP3Q53RY4 240 aa14.04□□□□□ -0.16
SNRPA1-213ENST00000560856 CMPK2Q5EBM0 449 aa14.04□□□□□ -0.16
SNRPA1-213ENST00000560856 ATG16L1Q676U5 607 aa14.04□□□□□ -0.16
SNRPA1-213ENST00000560856 DESI1Q6ICB0 168 aa14.04□□□□□ -0.16
SNRPA1-213ENST00000560856 TMEM107Q6UX40 140 aa14.04□□□□□ -0.16
SNRPA1-213ENST00000560856 GFRALQ6UXV0 394 aa14.04□□□□□ -0.16
SNRPA1-213ENST00000560856 LARP4Q71RC2 724 aaKnown RBP eCLIP14.04□□□□□ -0.16
SNRPA1-213ENST00000560856 R3HCC1LQ7Z5L2 792 aaKnown RBP14.04□□□□□ -0.16
SNRPA1-213ENST00000560856 TRIM42Q8IWZ5 723 aa14.04□□□□□ -0.16
SNRPA1-213ENST00000560856 PRR22Q8IZ63 422 aa14.04□□□□□ -0.16
SNRPA1-213ENST00000560856 FBXW8Q8N3Y1 598 aa14.04□□□□□ -0.16
SNRPA1-213ENST00000560856 FAM26EQ8N5C1 309 aa14.04□□□□□ -0.16
SNRPA1-213ENST00000560856 PRR7Q8TB68 274 aa14.04□□□□□ -0.16
SNRPA1-213ENST00000560856 SPPL2AQ8TCT8 520 aa14.04□□□□□ -0.16
SNRPA1-213ENST00000560856 COQ8BQ96D53 544 aa14.04□□□□□ -0.16
SNRPA1-213ENST00000560856 FAM173AQ9BQD7 235 aa14.04□□□□□ -0.16
SNRPA1-213ENST00000560856 FOLH1BQ9HBA9 442 aa14.04□□□□□ -0.16
SNRPA1-213ENST00000560856 ACSS1Q9NUB1 689 aaPredicted RBP14.04□□□□□ -0.16
SNRPA1-213ENST00000560856 TUBA8Q9NY65 449 aaPredicted RBP14.04□□□□□ -0.16
SNRPA1-213ENST00000560856 NTMQ9P121 344 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms