RNA–Protein interactions for RNA: ENST00000557782.1

TDP1-217, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 318 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-217ENST00000557782 PCMT1P22061 227 aa3.36□□□□□ -1.87
TDP1-217ENST00000557782 PTBP1P26599 531 aaKnown RBP eCLIP3.36□□□□□ -1.87
TDP1-217ENST00000557782 RFC2P35250 354 aa3.36□□□□□ -1.87
TDP1-217ENST00000557782 NUP62P37198 522 aaPredicted RBP3.36□□□□□ -1.87
TDP1-217ENST00000557782 FEN1P39748 380 aaKnown RBP3.36□□□□□ -1.87
TDP1-217ENST00000557782 MAGEA8P43361 318 aa3.36□□□□□ -1.87
TDP1-217ENST00000557782 HOXA1P49639 335 aaPredicted RBP3.36□□□□□ -1.87
TDP1-217ENST00000557782 AP3M2P53677 418 aa3.36□□□□□ -1.87
TDP1-217ENST00000557782 PLA2G16P53816 162 aa3.36□□□□□ -1.87
TDP1-217ENST00000557782 ABCE1P61221 599 aaKnown RBP3.36□□□□□ -1.87
TDP1-217ENST00000557782 POU3F1Q03052 451 aaPredicted RBP3.36□□□□□ -1.87
TDP1-217ENST00000557782 DNAJC3Q13217 504 aa3.36□□□□□ -1.87
TDP1-217ENST00000557782 TPSAB1Q15661 275 aa3.36□□□□□ -1.87
TDP1-217ENST00000557782 TMEM44Q2T9K0 475 aa3.36□□□□□ -1.87
TDP1-217ENST00000557782 FAM106AQ4KMX7 169 aa3.36□□□□□ -1.87
TDP1-217ENST00000557782 RFTN2Q52LD8 501 aaPredicted RBP3.36□□□□□ -1.87
TDP1-217ENST00000557782 FBXO48Q5FWF7 155 aa3.36□□□□□ -1.87
TDP1-217ENST00000557782 BEND6Q5SZJ8 279 aaPredicted RBP3.36□□□□□ -1.87
TDP1-217ENST00000557782 DCAF12Q5T6F0 453 aa3.36□□□□□ -1.87
TDP1-217ENST00000557782 ATP1A1-AS1Q5TC04 95 aa3.36□□□□□ -1.87
TDP1-217ENST00000557782 PXDC1Q5TGL8 231 aa3.36□□□□□ -1.87
TDP1-217ENST00000557782 RAET1LQ5VY80 246 aa3.36□□□□□ -1.87
TDP1-217ENST00000557782 ZNF562Q6V9R5 426 aa3.36□□□□□ -1.87
TDP1-217ENST00000557782 TMEM184AQ6ZMB5 413 aa3.36□□□□□ -1.87
TDP1-217ENST00000557782 ZNF730Q6ZMV8 503 aa3.36□□□□□ -1.87
TDP1-217ENST00000557782 KIF6Q6ZMV9 814 aa3.36□□□□□ -1.87
TDP1-217ENST00000557782 GCNT7Q6ZNI0 430 aa3.36□□□□□ -1.87
TDP1-217ENST00000557782 CCDC80Q76M96 950 aa3.36□□□□□ -1.87
TDP1-217ENST00000557782 Q7L0L9 218 aa3.36□□□□□ -1.87
TDP1-217ENST00000557782 MRGPRGQ86SM5 289 aa3.36□□□□□ -1.87
TDP1-217ENST00000557782 ACOT1Q86TX2 421 aa3.36□□□□□ -1.87
TDP1-217ENST00000557782 ITIH5Q86UX2 942 aa3.36□□□□□ -1.87
TDP1-217ENST00000557782 PARGQ86W56 976 aa3.36□□□□□ -1.87
TDP1-217ENST00000557782 TMEM17Q86X19 198 aa3.36□□□□□ -1.87
TDP1-217ENST00000557782 LDLRAD3Q86YD5 345 aa3.36□□□□□ -1.87
TDP1-217ENST00000557782 CLDN19Q8N6F1 224 aa3.36□□□□□ -1.87
TDP1-217ENST00000557782 ZNF383Q8NA42 475 aa3.36□□□□□ -1.87
TDP1-217ENST00000557782 DRAXINQ8NBI3 349 aaPredicted RBP3.36□□□□□ -1.87
TDP1-217ENST00000557782 ICA1LQ8NDH6 482 aa3.36□□□□□ -1.87
TDP1-217ENST00000557782 STXBP6Q8NFX7 210 aa3.36□□□□□ -1.87
TDP1-217ENST00000557782 OR8K3Q8NH51 312 aa3.36□□□□□ -1.87
TDP1-217ENST00000557782 LNX1Q8TBB1 728 aaPredicted RBP3.36□□□□□ -1.87
TDP1-217ENST00000557782 TSEN15Q8WW01 171 aaKnown RBP3.36□□□□□ -1.87
TDP1-217ENST00000557782 TMED6Q8WW62 240 aa3.36□□□□□ -1.87
TDP1-217ENST00000557782 FAM3CQ92520 227 aa3.36□□□□□ -1.87
TDP1-217ENST00000557782 ISG20Q96AZ6 181 aaKnown RBP3.36□□□□□ -1.87
TDP1-217ENST00000557782 OMA1Q96E52 524 aa3.36□□□□□ -1.87
TDP1-217ENST00000557782 C12orf66Q96MD2 445 aa3.36□□□□□ -1.87
TDP1-217ENST00000557782 TSNARE1Q96NA8 513 aa3.36□□□□□ -1.87
TDP1-217ENST00000557782 CXXC4Q9H2H0 198 aa3.36□□□□□ -1.87
TDP1-217ENST00000557782 SLC25A19Q9HC21 320 aa3.36□□□□□ -1.87
TDP1-217ENST00000557782 MCCC2Q9HCC0 563 aa3.36□□□□□ -1.87
TDP1-217ENST00000557782 RAB18Q9NP72 206 aa3.36□□□□□ -1.87
TDP1-217ENST00000557782 STARD5Q9NSY2 213 aa3.36□□□□□ -1.87
TDP1-217ENST00000557782 GNG12Q9UBI6 72 aa3.36□□□□□ -1.87
TDP1-217ENST00000557782 GHRLQ9UBU3 117 aa3.36□□□□□ -1.87
TDP1-217ENST00000557782 ZMAT5Q9UDW3 170 aaKnown RBP3.36□□□□□ -1.87
TDP1-217ENST00000557782 ZNHIT2Q9UHR6 403 aa3.36□□□□□ -1.87
TDP1-217ENST00000557782 ADAM28Q9UKQ2 775 aa3.36□□□□□ -1.87
TDP1-217ENST00000557782 EMCNQ9ULC0 261 aa3.36□□□□□ -1.87
TDP1-217ENST00000557782 CA5BQ9Y2D0 317 aa3.36□□□□□ -1.87
TDP1-217ENST00000557782 SLC9A8Q9Y2E8 581 aa3.36□□□□□ -1.87
TDP1-217ENST00000557782 TNIKQ9UKE5 1360 aa3.36□□□□□ -1.87
TDP1-217ENST00000557782 SPATA31D1Q6ZQQ2 1576 aa3.35□□□□□ -1.87
TDP1-217ENST00000557782 A0A1W2PNV4 684 aa3.35□□□□□ -1.87
TDP1-217ENST00000557782 BTBD17A6NE02 478 aa3.35□□□□□ -1.87
TDP1-217ENST00000557782 FBLL1A6NHQ2 334 aaKnown RBP3.35□□□□□ -1.87
TDP1-217ENST00000557782 LMO7DNF2Z398 122 aa3.35□□□□□ -1.87
TDP1-217ENST00000557782 FOXE1O00358 373 aaPredicted RBP3.35□□□□□ -1.87
TDP1-217ENST00000557782 ARHGEF9O43307 516 aa3.35□□□□□ -1.87
TDP1-217ENST00000557782 KCNAB3O43448 404 aa3.35□□□□□ -1.87
TDP1-217ENST00000557782 PAHP00439 452 aa3.35□□□□□ -1.87
TDP1-217ENST00000557782 PGK1P00558 417 aa3.35□□□□□ -1.87
TDP1-217ENST00000557782 CALCAP01258 141 aa3.35□□□□□ -1.87
TDP1-217ENST00000557782 UBTFL6P0CB48 400 aaPredicted RBP3.35□□□□□ -1.87
TDP1-217ENST00000557782 FAM157CP0CG43 387 aa3.35□□□□□ -1.87
TDP1-217ENST00000557782 OR8G3PP0DMU2 310 aa3.35□□□□□ -1.87
TDP1-217ENST00000557782 ERVK-10P10266 1014 aa3.35□□□□□ -1.87
TDP1-217ENST00000557782 ANXA3P12429 323 aa3.35□□□□□ -1.87
TDP1-217ENST00000557782 LIFP15018 202 aa3.35□□□□□ -1.87
TDP1-217ENST00000557782 GIFP27352 417 aa3.35□□□□□ -1.87
TDP1-217ENST00000557782 MAT2AP31153 395 aaKnown RBP3.35□□□□□ -1.87
TDP1-217ENST00000557782 BMI1P35226 326 aa3.35□□□□□ -1.87
TDP1-217ENST00000557782 BACE1P56817 501 aa3.35□□□□□ -1.87
TDP1-217ENST00000557782 RPS15P62841 145 aaKnown RBP3.35□□□□□ -1.87
TDP1-217ENST00000557782 TUBA1BP68363 451 aa3.35□□□□□ -1.87
TDP1-217ENST00000557782 IL9RQ01113 521 aa3.35□□□□□ -1.87
TDP1-217ENST00000557782 ZP4Q12836 540 aa3.35□□□□□ -1.87
TDP1-217ENST00000557782 BNIP1Q12981 228 aa3.35□□□□□ -1.87
TDP1-217ENST00000557782 SNTA1Q13424 505 aa3.35□□□□□ -1.87
TDP1-217ENST00000557782 TFDP1Q14186 410 aa3.35□□□□□ -1.87
TDP1-217ENST00000557782 SPANXN4Q5MJ08 99 aa3.35□□□□□ -1.87
TDP1-217ENST00000557782 LEG1Q6P5S2 330 aa3.35□□□□□ -1.87
TDP1-217ENST00000557782 KCNIP4Q6PIL6 250 aa3.35□□□□□ -1.87
TDP1-217ENST00000557782 TMEM207Q6UWW9 146 aa3.35□□□□□ -1.87
TDP1-217ENST00000557782 Q6ZVQ6 151 aa3.35□□□□□ -1.87
TDP1-217ENST00000557782 Q71RC1 249 aaPredicted RBP3.35□□□□□ -1.87
TDP1-217ENST00000557782 GPR142Q7Z601 462 aa3.35□□□□□ -1.87
TDP1-217ENST00000557782 ANKRD37Q7Z713 158 aa3.35□□□□□ -1.87
TDP1-217ENST00000557782 KIAA1328Q86T90 577 aa3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms