RNA–Protein interactions for RNA: ENST00000556017.1

CHMP4BP1-201, Transcript of charged multivesicular body protein 4B pseudogene 1, humanhuman

BASIC

Gene CHMP4BP1, Length 588 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BP1-201ENST00000556017 NOL11Q9H8H0 719 aaKnown RBP13.05□□□□□ -0.32
CHMP4BP1-201ENST00000556017 SERHLQ9NQF3 203 aa13.05□□□□□ -0.32
CHMP4BP1-201ENST00000556017 PRR14LQ5THK1 2151 aa13.04□□□□□ -0.32
CHMP4BP1-201ENST00000556017 A0A087X1B8 175 aa13.04□□□□□ -0.32
CHMP4BP1-201ENST00000556017 TNFSF12-TNFSF13A0A0A6YY99 330 aa13.04□□□□□ -0.32
CHMP4BP1-201ENST00000556017 CCDC189A1A4V9 331 aa13.04□□□□□ -0.32
CHMP4BP1-201ENST00000556017 C17orf51A8MQB3 221 aa13.04□□□□□ -0.32
CHMP4BP1-201ENST00000556017 SYCE1LA8MT33 242 aa13.04□□□□□ -0.32
CHMP4BP1-201ENST00000556017 PPP6CO00743 305 aa13.04□□□□□ -0.32
CHMP4BP1-201ENST00000556017 NME6O75414 186 aaPredicted RBP13.04□□□□□ -0.32
CHMP4BP1-201ENST00000556017 TNFSF13O75888 250 aa13.04□□□□□ -0.32
CHMP4BP1-201ENST00000556017 CLDN9O95484 217 aa13.04□□□□□ -0.32
CHMP4BP1-201ENST00000556017 ACTL6AO96019 429 aa13.04□□□□□ -0.32
CHMP4BP1-201ENST00000556017 ATP1B1P05026 303 aa13.04□□□□□ -0.32
CHMP4BP1-201ENST00000556017 KLK1P06870 262 aa13.04□□□□□ -0.32
CHMP4BP1-201ENST00000556017 TMIGD3P0DMS9 266 aaPredicted RBP13.04□□□□□ -0.32
CHMP4BP1-201ENST00000556017 GFAPP14136 432 aa13.04□□□□□ -0.32
CHMP4BP1-201ENST00000556017 PORP16435 677 aaPredicted RBP13.04□□□□□ -0.32
CHMP4BP1-201ENST00000556017 CNTFP26441 200 aa13.04□□□□□ -0.32
CHMP4BP1-201ENST00000556017 PAFAH1B1P43034 410 aa13.04□□□□□ -0.32
CHMP4BP1-201ENST00000556017 EMDP50402 254 aa13.04□□□□□ -0.32
CHMP4BP1-201ENST00000556017 LHX2P50458 406 aa13.04□□□□□ -0.32
CHMP4BP1-201ENST00000556017 PLTPP55058 493 aa13.04□□□□□ -0.32
CHMP4BP1-201ENST00000556017 CALCOCO2Q13137 446 aa13.04□□□□□ -0.32
CHMP4BP1-201ENST00000556017 NAB1Q13506 487 aa13.04□□□□□ -0.32
CHMP4BP1-201ENST00000556017 TRMT12Q53H54 448 aaKnown RBP13.04□□□□□ -0.32
CHMP4BP1-201ENST00000556017 MROH9Q5TGP6 573 aa13.04□□□□□ -0.32
CHMP4BP1-201ENST00000556017 HLA-DQA1Q5Y7H0 255 aa13.04□□□□□ -0.32
CHMP4BP1-201ENST00000556017 FRG2Q64ET8 278 aa13.04□□□□□ -0.32
CHMP4BP1-201ENST00000556017 FAM180BQ6P0A1 224 aa13.04□□□□□ -0.32
CHMP4BP1-201ENST00000556017 SLC48A1Q6P1K1 146 aa13.04□□□□□ -0.32
CHMP4BP1-201ENST00000556017 METTL2BQ6P1Q9 378 aaKnown RBP13.04□□□□□ -0.32
CHMP4BP1-201ENST00000556017 RPS27LQ71UM5 84 aaKnown RBP13.04□□□□□ -0.32
CHMP4BP1-201ENST00000556017 TRIM42Q8IWZ5 723 aa13.04□□□□□ -0.32
CHMP4BP1-201ENST00000556017 VWA5B2Q8N398 1253 aa13.04□□□□□ -0.32
CHMP4BP1-201ENST00000556017 METTL4Q8N3J2 472 aa13.04□□□□□ -0.32
CHMP4BP1-201ENST00000556017 REPS1Q96D71 796 aa13.04□□□□□ -0.32
CHMP4BP1-201ENST00000556017 OMA1Q96E52 524 aa13.04□□□□□ -0.32
CHMP4BP1-201ENST00000556017 LRRC46Q96FV0 321 aa13.04□□□□□ -0.32
CHMP4BP1-201ENST00000556017 ZNF681Q96N22 645 aa13.04□□□□□ -0.32
CHMP4BP1-201ENST00000556017 DACH2Q96NX9 599 aa13.04□□□□□ -0.32
CHMP4BP1-201ENST00000556017 FRG2BQ96QU4 278 aa13.04□□□□□ -0.32
CHMP4BP1-201ENST00000556017 SERPINI1Q99574 410 aa13.04□□□□□ -0.32
CHMP4BP1-201ENST00000556017 NTMT1Q9BV86 223 aa13.04□□□□□ -0.32
CHMP4BP1-201ENST00000556017 WDR41Q9HAD4 459 aa13.04□□□□□ -0.32
CHMP4BP1-201ENST00000556017 FARSBQ9NSD9 589 aaKnown RBP13.04□□□□□ -0.32
CHMP4BP1-201ENST00000556017 EHD3Q9NZN3 535 aa13.04□□□□□ -0.32
CHMP4BP1-201ENST00000556017 RNF14Q9UBS8 474 aa13.04□□□□□ -0.32
CHMP4BP1-201ENST00000556017 ZNF225Q9UK10 706 aa13.04□□□□□ -0.32
CHMP4BP1-201ENST00000556017 ADAM29Q9UKF5 820 aa13.04□□□□□ -0.32
CHMP4BP1-201ENST00000556017 PCTPQ9UKL6 214 aa13.04□□□□□ -0.32
CHMP4BP1-201ENST00000556017 PYCARDQ9ULZ3 195 aa13.04□□□□□ -0.32
CHMP4BP1-201ENST00000556017 MAPRE3Q9UPY8 281 aa13.04□□□□□ -0.32
CHMP4BP1-201ENST00000556017 EXO1Q9UQ84 846 aaKnown RBP13.04□□□□□ -0.32
CHMP4BP1-201ENST00000556017 ANGPTL3Q9Y5C1 460 aa13.04□□□□□ -0.32
CHMP4BP1-201ENST00000556017 PCDHA9Q9Y5H5 950 aa13.04□□□□□ -0.32
CHMP4BP1-201ENST00000556017 DSCAMO60469 2012 aa13.04□□□□□ -0.32
CHMP4BP1-201ENST00000556017 ANK3Q12955 4377 aaKnown RBP13.03□□□□□ -0.32
CHMP4BP1-201ENST00000556017 A0A096LPK6 155 aa13.03□□□□□ -0.32
CHMP4BP1-201ENST00000556017 A8MXE2 369 aa13.03□□□□□ -0.32
CHMP4BP1-201ENST00000556017 TO15178 435 aa13.03□□□□□ -0.32
CHMP4BP1-201ENST00000556017 GOSR1O95249 250 aa13.03□□□□□ -0.32
CHMP4BP1-201ENST00000556017 INHBBP09529 407 aa13.03□□□□□ -0.32
CHMP4BP1-201ENST00000556017 RHOXF2BP0C7M4 288 aa13.03□□□□□ -0.32
CHMP4BP1-201ENST00000556017 DRD2P14416 443 aa13.03□□□□□ -0.32
CHMP4BP1-201ENST00000556017 NT5EP21589 574 aa13.03□□□□□ -0.32
CHMP4BP1-201ENST00000556017 MAGEA12P43365 314 aa13.03□□□□□ -0.32
CHMP4BP1-201ENST00000556017 STARP49675 285 aa13.03□□□□□ -0.32
CHMP4BP1-201ENST00000556017 CLDN18P56856 261 aa13.03□□□□□ -0.32
CHMP4BP1-201ENST00000556017 NRG3P56975 720 aa13.03□□□□□ -0.32
CHMP4BP1-201ENST00000556017 C2orf54Q08AI8 447 aa13.03□□□□□ -0.32
CHMP4BP1-201ENST00000556017 LTB4RQ15722 352 aa13.03□□□□□ -0.32
CHMP4BP1-201ENST00000556017 FAM83EQ2M2I3 478 aa13.03□□□□□ -0.32
CHMP4BP1-201ENST00000556017 SLC30A6Q6NXT4 461 aa13.03□□□□□ -0.32
CHMP4BP1-201ENST00000556017 NUP54Q7Z3B4 507 aa13.03□□□□□ -0.32
CHMP4BP1-201ENST00000556017 COMMD6Q7Z4G1 85 aa13.03□□□□□ -0.32
CHMP4BP1-201ENST00000556017 LUZP2Q86TE4 346 aa13.03□□□□□ -0.32
CHMP4BP1-201ENST00000556017 GCNT2Q8N0V5 402 aa13.03□□□□□ -0.32
CHMP4BP1-201ENST00000556017 CIARTQ8N365 385 aaPredicted RBP13.03□□□□□ -0.32
CHMP4BP1-201ENST00000556017 ADCY4Q8NFM4 1077 aa13.03□□□□□ -0.32
CHMP4BP1-201ENST00000556017 SMPDL3BQ92485 455 aa13.03□□□□□ -0.32
CHMP4BP1-201ENST00000556017 TM4SF18Q96CE8 201 aa13.03□□□□□ -0.32
CHMP4BP1-201ENST00000556017 CNRIP1Q96F85 164 aaPredicted RBP13.03□□□□□ -0.32
CHMP4BP1-201ENST00000556017 LCORQ96JN0 433 aaPredicted RBP13.03□□□□□ -0.32
CHMP4BP1-201ENST00000556017 SFXN3Q9BWM7 321 aa13.03□□□□□ -0.32
CHMP4BP1-201ENST00000556017 RBM24Q9BX46 236 aaKnown RBP13.03□□□□□ -0.32
CHMP4BP1-201ENST00000556017 OSBPL11Q9BXB4 747 aa13.03□□□□□ -0.32
CHMP4BP1-201ENST00000556017 ANKRA2Q9H9E1 313 aa13.03□□□□□ -0.32
CHMP4BP1-201ENST00000556017 PRM3Q9NNZ6 103 aa13.03□□□□□ -0.32
CHMP4BP1-201ENST00000556017 CPSF2Q9P2I0 782 aaKnown RBP13.03□□□□□ -0.32
CHMP4BP1-201ENST00000556017 FBXL2Q9UKC9 423 aa13.03□□□□□ -0.32
CHMP4BP1-201ENST00000556017 EDARQ9UNE0 448 aa13.03□□□□□ -0.32
CHMP4BP1-201ENST00000556017 PLLPQ9Y342 182 aa13.03□□□□□ -0.32
CHMP4BP1-201ENST00000556017 FBN1P35555 2871 aaKnown RBP13.03□□□□□ -0.32
CHMP4BP1-201ENST00000556017 SH3D21A4FU49 640 aa13.02□□□□□ -0.33
CHMP4BP1-201ENST00000556017 DEFB108AA8MXU0 73 aa13.02□□□□□ -0.33
CHMP4BP1-201ENST00000556017 HCRTR2O43614 444 aa13.02□□□□□ -0.33
CHMP4BP1-201ENST00000556017 ZIC3O60481 467 aa13.02□□□□□ -0.33
CHMP4BP1-201ENST00000556017 TGM6O95932 706 aa13.02□□□□□ -0.33
CHMP4BP1-201ENST00000556017 SBK3P0C264 359 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms