RNA–Protein interactions for RNA: ENST00000555323.1

SYNE2-219, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 3

Gene SYNE2, Length 389 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-219ENST00000555323 SOX30O94993 753 aa11.75□□□□□ -0.53
SYNE2-219ENST00000555323 CPSF4O95639 269 aaKnown RBP11.75□□□□□ -0.53
SYNE2-219ENST00000555323 HOXB9P17482 250 aaPredicted RBP11.75□□□□□ -0.53
SYNE2-219ENST00000555323 CDKN2CP42773 168 aa11.75□□□□□ -0.53
SYNE2-219ENST00000555323 PPICP45877 212 aa11.75□□□□□ -0.53
SYNE2-219ENST00000555323 POLE2P56282 527 aa11.75□□□□□ -0.53
SYNE2-219ENST00000555323 PSG6Q00889 435 aa11.75□□□□□ -0.53
SYNE2-219ENST00000555323 MAPRE2Q15555 327 aa11.75□□□□□ -0.53
SYNE2-219ENST00000555323 MEP1AQ16819 746 aa11.75□□□□□ -0.53
SYNE2-219ENST00000555323 TIGD2Q4W5G0 525 aa11.75□□□□□ -0.53
SYNE2-219ENST00000555323 PIGGQ5H8A4 983 aa11.75□□□□□ -0.53
SYNE2-219ENST00000555323 PAGE3Q5JUK9 113 aa11.75□□□□□ -0.53
SYNE2-219ENST00000555323 ACER2Q5QJU3 275 aa11.75□□□□□ -0.53
SYNE2-219ENST00000555323 LRIF1Q5T3J3 769 aa11.75□□□□□ -0.53
SYNE2-219ENST00000555323 FAM91A1Q658Y4 838 aa11.75□□□□□ -0.53
SYNE2-219ENST00000555323 B3GNTL1Q67FW5 361 aaPredicted RBP11.75□□□□□ -0.53
SYNE2-219ENST00000555323 TCTN3Q6NUS6 607 aa11.75□□□□□ -0.53
SYNE2-219ENST00000555323 BHLHB9Q6PI77 547 aa11.75□□□□□ -0.53
SYNE2-219ENST00000555323 IGFL3Q6UXB1 125 aa11.75□□□□□ -0.53
SYNE2-219ENST00000555323 ISLR2Q6UXK2 745 aa11.75□□□□□ -0.53
SYNE2-219ENST00000555323 GK5Q6ZS86 529 aa11.75□□□□□ -0.53
SYNE2-219ENST00000555323 SLC15A4Q8N697 577 aa11.75□□□□□ -0.53
SYNE2-219ENST00000555323 TRIML2Q8N7C3 387 aa11.75□□□□□ -0.53
SYNE2-219ENST00000555323 OR56A1Q8NGH5 318 aa11.75□□□□□ -0.53
SYNE2-219ENST00000555323 OR4A15Q8NGL6 344 aa11.75□□□□□ -0.53
SYNE2-219ENST00000555323 LRRC37BQ96QE4 947 aa11.75□□□□□ -0.53
SYNE2-219ENST00000555323 LMF2Q9BU23 707 aaKnown RBP11.75□□□□□ -0.53
SYNE2-219ENST00000555323 SLC25A23Q9BV35 468 aa11.75□□□□□ -0.53
SYNE2-219ENST00000555323 WWTR1Q9GZV5 400 aa11.75□□□□□ -0.53
SYNE2-219ENST00000555323 RNF32Q9H0A6 362 aa11.75□□□□□ -0.53
SYNE2-219ENST00000555323 ADNPQ9H2P0 1102 aa11.75□□□□□ -0.53
SYNE2-219ENST00000555323 CDCP1Q9H5V8 836 aa11.75□□□□□ -0.53
SYNE2-219ENST00000555323 EPS8L2Q9H6S3 715 aa11.75□□□□□ -0.53
SYNE2-219ENST00000555323 TRIM45Q9H8W5 580 aaPredicted RBP11.75□□□□□ -0.53
SYNE2-219ENST00000555323 ZCCHC3Q9NUD5 404 aaKnown RBP11.75□□□□□ -0.53
SYNE2-219ENST00000555323 GPATCH2Q9NW75 528 aa11.75□□□□□ -0.53
SYNE2-219ENST00000555323 GIN1Q9NXP7 522 aa11.75□□□□□ -0.53
SYNE2-219ENST00000555323 STMN3Q9NZ72 180 aa11.75□□□□□ -0.53
SYNE2-219ENST00000555323 ARMCX1Q9P291 453 aa11.75□□□□□ -0.53
SYNE2-219ENST00000555323 MAP10Q9P2G4 905 aa11.75□□□□□ -0.53
SYNE2-219ENST00000555323 LEF1Q9UJU2 399 aaPredicted RBP11.75□□□□□ -0.53
SYNE2-219ENST00000555323 DTX4Q9Y2E6 619 aa11.75□□□□□ -0.53
SYNE2-219ENST00000555323 YARS2Q9Y2Z4 477 aaKnown RBP11.75□□□□□ -0.53
SYNE2-219ENST00000555323 SNX8Q9Y5X2 465 aa11.75□□□□□ -0.53
SYNE2-219ENST00000555323 A0A096LPI6 279 aa11.74□□□□□ -0.53
SYNE2-219ENST00000555323 A6NL46 340 aa11.74□□□□□ -0.53
SYNE2-219ENST00000555323 MKRN2OSH3BPM6 223 aa11.74□□□□□ -0.53
SYNE2-219ENST00000555323 FBP2O00757 339 aa11.74□□□□□ -0.53
SYNE2-219ENST00000555323 NPPAP01160 153 aa11.74□□□□□ -0.53
SYNE2-219ENST00000555323 ABCB1P08183 1280 aaPredicted RBP11.74□□□□□ -0.53
SYNE2-219ENST00000555323 CT45A8P0DMV1 189 aa11.74□□□□□ -0.53
SYNE2-219ENST00000555323 CT45A9P0DMV2 189 aa11.74□□□□□ -0.53
SYNE2-219ENST00000555323 PRDX6P30041 224 aa11.74□□□□□ -0.53
SYNE2-219ENST00000555323 TRHRP34981 398 aaPredicted RBP11.74□□□□□ -0.53
SYNE2-219ENST00000555323 PSPHP78330 225 aa11.74□□□□□ -0.53
SYNE2-219ENST00000555323 STX5Q13190 355 aa11.74□□□□□ -0.53
SYNE2-219ENST00000555323 MFAP5Q13361 173 aa11.74□□□□□ -0.53
SYNE2-219ENST00000555323 CYLC2Q14093 348 aaPredicted RBP11.74□□□□□ -0.53
SYNE2-219ENST00000555323 CT45A2Q5DJT8 189 aa11.74□□□□□ -0.53
SYNE2-219ENST00000555323 SAXO2Q658L1 398 aa11.74□□□□□ -0.53
SYNE2-219ENST00000555323 MFSD12Q6NUT3 480 aa11.74□□□□□ -0.53
SYNE2-219ENST00000555323 SLC2A7Q6PXP3 512 aa11.74□□□□□ -0.53
SYNE2-219ENST00000555323 DLEU7Q6UYE1 221 aa11.74□□□□□ -0.53
SYNE2-219ENST00000555323 ZNF621Q6ZSS3 439 aa11.74□□□□□ -0.53
SYNE2-219ENST00000555323 C6orf120Q7Z4R8 191 aa11.74□□□□□ -0.53
SYNE2-219ENST00000555323 TREML1Q86YW5 311 aa11.74□□□□□ -0.53
SYNE2-219ENST00000555323 SIRT6Q8N6T7 355 aa11.74□□□□□ -0.53
SYNE2-219ENST00000555323 CDRT4Q8N9R6 151 aa11.74□□□□□ -0.53
SYNE2-219ENST00000555323 MIPOL1Q8TD10 442 aa11.74□□□□□ -0.53
SYNE2-219ENST00000555323 HAS2Q92819 552 aa11.74□□□□□ -0.53
SYNE2-219ENST00000555323 NEURL3Q96EH8 262 aa11.74□□□□□ -0.53
SYNE2-219ENST00000555323 HSPBAP1Q96EW2 488 aa11.74□□□□□ -0.53
SYNE2-219ENST00000555323 WBP1Q96G27 269 aa11.74□□□□□ -0.53
SYNE2-219ENST00000555323 MAGED4Q96JG8 741 aa11.74□□□□□ -0.53
SYNE2-219ENST00000555323 LCORQ96JN0 433 aaPredicted RBP11.74□□□□□ -0.53
SYNE2-219ENST00000555323 MS4A4EQ96PG1 132 aa11.74□□□□□ -0.53
SYNE2-219ENST00000555323 BTBD9Q96Q07 612 aa11.74□□□□□ -0.53
SYNE2-219ENST00000555323 PAIP1Q9H074 479 aaKnown RBP11.74□□□□□ -0.53
SYNE2-219ENST00000555323 FOLH1BQ9HBA9 442 aa11.74□□□□□ -0.53
SYNE2-219ENST00000555323 SLAMF8Q9P0V8 285 aa11.74□□□□□ -0.53
SYNE2-219ENST00000555323 VPS4AQ9UN37 437 aa11.74□□□□□ -0.53
SYNE2-219ENST00000555323 PCDHB14Q9Y5E9 798 aa11.74□□□□□ -0.53
SYNE2-219ENST00000555323 DOCK10Q96BY6 2186 aa11.74□□□□□ -0.53
SYNE2-219ENST00000555323 TRBV5-3A0A0A0MS03 114 aa11.73□□□□□ -0.53
SYNE2-219ENST00000555323 LOC100653049A0A140TA62 436 aa11.73□□□□□ -0.53
SYNE2-219ENST00000555323 FRG2CA6NGY1 282 aa11.73□□□□□ -0.53
SYNE2-219ENST00000555323 BBIP1A8MTZ0 92 aa11.73□□□□□ -0.53
SYNE2-219ENST00000555323 ERVH48-1M5A8F1 160 aa11.73□□□□□ -0.53
SYNE2-219ENST00000555323 ANGPT2O15123 496 aa11.73□□□□□ -0.53
SYNE2-219ENST00000555323 ACOX3O15254 700 aa11.73□□□□□ -0.53
SYNE2-219ENST00000555323 MAN1A2O60476 641 aa11.73□□□□□ -0.53
SYNE2-219ENST00000555323 ZNF354AO60765 605 aaPredicted RBP11.73□□□□□ -0.53
SYNE2-219ENST00000555323 ITGA10O75578 1167 aa11.73□□□□□ -0.53
SYNE2-219ENST00000555323 KRT34O76011 436 aa11.73□□□□□ -0.53
SYNE2-219ENST00000555323 NKX2-2O95096 273 aa11.73□□□□□ -0.53
SYNE2-219ENST00000555323 NADKO95544 446 aaPredicted RBP11.73□□□□□ -0.53
SYNE2-219ENST00000555323 ALPPP05187 535 aa11.73□□□□□ -0.53
SYNE2-219ENST00000555323 HMGN2P05204 90 aaKnown RBP11.73□□□□□ -0.53
SYNE2-219ENST00000555323 NAGAP17050 411 aa11.73□□□□□ -0.53
SYNE2-219ENST00000555323 NUP214P35658 2090 aaPredicted RBP11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms