RNA–Protein interactions for RNA: ENST00000555244.1

CPSF2-204, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

TSL 3

Gene CPSF2, Length 806 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-204ENST00000555244 LOC102723532A0A0G2JNH3 316 aa3.89□□□□□ -1.79
CPSF2-204ENST00000555244 KRT87PA6NCN2 255 aa3.89□□□□□ -1.79
CPSF2-204ENST00000555244 FAM159BA6NKW6 160 aa3.89□□□□□ -1.79
CPSF2-204ENST00000555244 SOCS6O14544 535 aa3.89□□□□□ -1.79
CPSF2-204ENST00000555244 PRPF4O43172 522 aaKnown RBP eCLIP3.89□□□□□ -1.79
CPSF2-204ENST00000555244 SLC28A2O43868 658 aa3.89□□□□□ -1.79
CPSF2-204ENST00000555244 PRAMEF2O60811 474 aa3.89□□□□□ -1.79
CPSF2-204ENST00000555244 NSA2O95478 260 aaKnown RBP3.89□□□□□ -1.79
CPSF2-204ENST00000555244 HIST1H2AGP0C0S8 130 aaPredicted RBP3.89□□□□□ -1.79
CPSF2-204ENST00000555244 HIST1H2ADP20671 130 aa3.89□□□□□ -1.79
CPSF2-204ENST00000555244 MCM3P25205 808 aa3.89□□□□□ -1.79
CPSF2-204ENST00000555244 PSMB5P28074 263 aa3.89□□□□□ -1.79
CPSF2-204ENST00000555244 GSTM2P28161 218 aa3.89□□□□□ -1.79
CPSF2-204ENST00000555244 GALNSP34059 522 aa3.89□□□□□ -1.79
CPSF2-204ENST00000555244 GRK5P34947 590 aa3.89□□□□□ -1.79
CPSF2-204ENST00000555244 RPA3P35244 121 aaPredicted RBP3.89□□□□□ -1.79
CPSF2-204ENST00000555244 AHRP35869 848 aa3.89□□□□□ -1.79
CPSF2-204ENST00000555244 GGT5P36269 586 aa3.89□□□□□ -1.79
CPSF2-204ENST00000555244 PCP4P48539 62 aa3.89□□□□□ -1.79
CPSF2-204ENST00000555244 HNMTP50135 292 aa3.89□□□□□ -1.79
CPSF2-204ENST00000555244 VSX2P58304 361 aaPredicted RBP3.89□□□□□ -1.79
CPSF2-204ENST00000555244 RPS15AP62244 130 aaKnown RBP3.89□□□□□ -1.79
CPSF2-204ENST00000555244 CSNK1G2P78368 415 aa3.89□□□□□ -1.79
CPSF2-204ENST00000555244 AIMP2Q13155 320 aaKnown RBP3.89□□□□□ -1.79
CPSF2-204ENST00000555244 NAB1Q13506 487 aa3.89□□□□□ -1.79
CPSF2-204ENST00000555244 CUL1Q13616 776 aa3.89□□□□□ -1.79
CPSF2-204ENST00000555244 MFSD13AQ14CX5 517 aa3.89□□□□□ -1.79
CPSF2-204ENST00000555244 ZKSCAN8Q15776 578 aaPredicted RBP3.89□□□□□ -1.79
CPSF2-204ENST00000555244 PHKG1Q16816 387 aa3.89□□□□□ -1.79
CPSF2-204ENST00000555244 DEFB110Q30KQ9 67 aa3.89□□□□□ -1.79
CPSF2-204ENST00000555244 VWA5B1Q5TIE3 1220 aa3.89□□□□□ -1.79
CPSF2-204ENST00000555244 MLIPQ5VWP3 458 aa3.89□□□□□ -1.79
CPSF2-204ENST00000555244 SUMO4Q6EEV6 95 aa3.89□□□□□ -1.79
CPSF2-204ENST00000555244 NIPAL1Q6NVV3 410 aa3.89□□□□□ -1.79
CPSF2-204ENST00000555244 AGTRAPQ6RW13 159 aa3.89□□□□□ -1.79
CPSF2-204ENST00000555244 TMEM205Q6UW68 189 aa3.89□□□□□ -1.79
CPSF2-204ENST00000555244 SUSD1Q6UWL2 747 aa3.89□□□□□ -1.79
CPSF2-204ENST00000555244 LCTLQ6UWM7 567 aa3.89□□□□□ -1.79
CPSF2-204ENST00000555244 Q6ZS92 163 aa3.89□□□□□ -1.79
CPSF2-204ENST00000555244 ASB18Q6ZVZ8 466 aa3.89□□□□□ -1.79
CPSF2-204ENST00000555244 PIWIL4Q7Z3Z4 852 aaKnown RBP3.89□□□□□ -1.79
CPSF2-204ENST00000555244 VN1R4Q7Z5H5 301 aa3.89□□□□□ -1.79
CPSF2-204ENST00000555244 BCDIN3DQ7Z5W3 292 aaKnown RBP3.89□□□□□ -1.79
CPSF2-204ENST00000555244 CCDC91Q7Z6B0 441 aa3.89□□□□□ -1.79
CPSF2-204ENST00000555244 KLHL7Q8IXQ5 586 aa3.89□□□□□ -1.79
CPSF2-204ENST00000555244 OR4N4Q8N0Y3 316 aa3.89□□□□□ -1.79
CPSF2-204ENST00000555244 C2orf73Q8N5S3 287 aaPredicted RBP3.89□□□□□ -1.79
CPSF2-204ENST00000555244 OTUD6BQ8N6M0 293 aa3.89□□□□□ -1.79
CPSF2-204ENST00000555244 RBMXL3Q8N7X1 1067 aaKnown RBP3.89□□□□□ -1.79
CPSF2-204ENST00000555244 AMER3Q8N944 861 aa3.89□□□□□ -1.79
CPSF2-204ENST00000555244 TTC29Q8NA56 475 aaPredicted RBP3.89□□□□□ -1.79
CPSF2-204ENST00000555244 TEX19Q8NA77 164 aa3.89□□□□□ -1.79
CPSF2-204ENST00000555244 FBXO36Q8NEA4 188 aa3.89□□□□□ -1.79
CPSF2-204ENST00000555244 SRFBP1Q8NEF9 429 aaKnown RBP3.89□□□□□ -1.79
CPSF2-204ENST00000555244 FDCSPQ8NFU4 85 aa3.89□□□□□ -1.79
CPSF2-204ENST00000555244 ADAMTS18Q8TE60 1221 aa3.89□□□□□ -1.79
CPSF2-204ENST00000555244 ATL1Q8WXF7 558 aa3.89□□□□□ -1.79
CPSF2-204ENST00000555244 NPIPB3Q92617 1050 aa3.89□□□□□ -1.79
CPSF2-204ENST00000555244 N4BP2L2Q92802 583 aaPredicted RBP3.89□□□□□ -1.79
CPSF2-204ENST00000555244 PNPLA2Q96AD5 504 aa3.89□□□□□ -1.79
CPSF2-204ENST00000555244 MIB2Q96AX9 1013 aa3.89□□□□□ -1.79
CPSF2-204ENST00000555244 UBXN10Q96LJ8 280 aa3.89□□□□□ -1.79
CPSF2-204ENST00000555244 OR4K3Q96R72 315 aa3.89□□□□□ -1.79
CPSF2-204ENST00000555244 KRT12Q99456 494 aa3.89□□□□□ -1.79
CPSF2-204ENST00000555244 GPR22Q99680 433 aa3.89□□□□□ -1.79
CPSF2-204ENST00000555244 OLFM1Q99784 485 aa3.89□□□□□ -1.79
CPSF2-204ENST00000555244 TRIM51Q9BSJ1 452 aa3.89□□□□□ -1.79
CPSF2-204ENST00000555244 HAUS8Q9BT25 410 aa3.89□□□□□ -1.79
CPSF2-204ENST00000555244 H2AFJQ9BTM1 129 aa3.89□□□□□ -1.79
CPSF2-204ENST00000555244 SLC25A23Q9BV35 468 aa3.89□□□□□ -1.79
CPSF2-204ENST00000555244 NUDT9Q9BW91 350 aa3.89□□□□□ -1.79
CPSF2-204ENST00000555244 DERL2Q9GZP9 239 aa3.89□□□□□ -1.79
CPSF2-204ENST00000555244 RHOJQ9H4E5 214 aa3.89□□□□□ -1.79
CPSF2-204ENST00000555244 CDCP1Q9H5V8 836 aa3.89□□□□□ -1.79
CPSF2-204ENST00000555244 CLMPQ9H6B4 373 aa3.89□□□□□ -1.79
CPSF2-204ENST00000555244 NT5DC2Q9H857 520 aa3.89□□□□□ -1.79
CPSF2-204ENST00000555244 ZNF304Q9HCX3 659 aa3.89□□□□□ -1.79
CPSF2-204ENST00000555244 MRPS30Q9NP92 439 aaKnown RBP3.89□□□□□ -1.79
CPSF2-204ENST00000555244 MKKSQ9NPJ1 570 aaPredicted RBP3.89□□□□□ -1.79
CPSF2-204ENST00000555244 CCDC177Q9NQR7 707 aaPredicted RBP3.89□□□□□ -1.79
CPSF2-204ENST00000555244 SMYD2Q9NRG4 433 aa3.89□□□□□ -1.79
CPSF2-204ENST00000555244 C14orf105Q9NVL8 296 aa3.89□□□□□ -1.79
CPSF2-204ENST00000555244 P4HTMQ9NXG6 502 aa3.89□□□□□ -1.79
CPSF2-204ENST00000555244 SH3BP4Q9P0V3 963 aa3.89□□□□□ -1.79
CPSF2-204ENST00000555244 TAC3Q9UHF0 121 aa3.89□□□□□ -1.79
CPSF2-204ENST00000555244 KLHL20Q9Y2M5 609 aa3.89□□□□□ -1.79
CPSF2-204ENST00000555244 PTRH2Q9Y3E5 179 aaKnown RBP3.89□□□□□ -1.79
CPSF2-204ENST00000555244 HEMK1Q9Y5R4 338 aaPredicted RBP3.89□□□□□ -1.79
CPSF2-204ENST00000555244 PSAT1Q9Y617 370 aa3.89□□□□□ -1.79
CPSF2-204ENST00000555244 HS3ST3B1Q9Y662 390 aa3.89□□□□□ -1.79
CPSF2-204ENST00000555244 MDC1Q14676 2089 aaKnown RBP3.89□□□□□ -1.79
CPSF2-204ENST00000555244 ITPR2Q14571 2701 aa3.89□□□□□ -1.79
CPSF2-204ENST00000555244 DOCK10Q96BY6 2186 aa3.89□□□□□ -1.79
CPSF2-204ENST00000555244 CCDC88CQ9P219 2028 aa3.88□□□□□ -1.79
CPSF2-204ENST00000555244 SHANK1Q9Y566 2161 aa3.88□□□□□ -1.79
CPSF2-204ENST00000555244 NBPF19A0A087WUL8 3843 aa3.88□□□□□ -1.79
CPSF2-204ENST00000555244 A0A0J9YVX5 310 aa3.88□□□□□ -1.79
CPSF2-204ENST00000555244 TCRBV9S1A1TA0A576 114 aa3.88□□□□□ -1.79
CPSF2-204ENST00000555244 TRBC2A0A5B9 178 aa3.88□□□□□ -1.79
CPSF2-204ENST00000555244 MBD3L5A6NJ08 208 aaPredicted RBP3.88□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms