RNA–Protein interactions for RNA: ENST00000553779.5

ACTN1-210, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 530 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-210ENST00000553779 RBM24Q9BX46 236 aaKnown RBP9.05□□□□□ -0.96
ACTN1-210ENST00000553779 ITPAQ9BY32 194 aa9.05□□□□□ -0.96
ACTN1-210ENST00000553779 ANGPTL4Q9BY76 406 aa9.05□□□□□ -0.96
ACTN1-210ENST00000553779 PRDM14Q9GZV8 571 aa9.05□□□□□ -0.96
ACTN1-210ENST00000553779 ACBD3Q9H3P7 528 aa9.05□□□□□ -0.96
ACTN1-210ENST00000553779 PROK2Q9HC23 129 aa9.05□□□□□ -0.96
ACTN1-210ENST00000553779 SERHLQ9NQF3 203 aa9.05□□□□□ -0.96
ACTN1-210ENST00000553779 EHD3Q9NZN3 535 aa9.05□□□□□ -0.96
ACTN1-210ENST00000553779 PSME2Q9UL46 239 aa9.05□□□□□ -0.96
ACTN1-210ENST00000553779 TMCO1Q9UM00 188 aa9.05□□□□□ -0.96
ACTN1-210ENST00000553779 SLC12A4Q9UP95 1085 aa9.05□□□□□ -0.96
ACTN1-210ENST00000553779 TSC22D4Q9Y3Q8 395 aa9.05□□□□□ -0.96
ACTN1-210ENST00000553779 ZNF780BQ9Y6R6 833 aa9.05□□□□□ -0.96
ACTN1-210ENST00000553779 RTTNQ86VV8 2226 aa9.05□□□□□ -0.96
ACTN1-210ENST00000553779 A0A1W2PS29 197 aa9.04□□□□□ -0.96
ACTN1-210ENST00000553779 PRAMEF25A6NGN4 478 aa9.04□□□□□ -0.96
ACTN1-210ENST00000553779 WASHC1A8K0Z3 465 aa9.04□□□□□ -0.96
ACTN1-210ENST00000553779 KDM4EB2RXH2 506 aaPredicted RBP9.04□□□□□ -0.96
ACTN1-210ENST00000553779 ACTL6AO96019 429 aa9.04□□□□□ -0.96
ACTN1-210ENST00000553779 INHBAP08476 426 aa9.04□□□□□ -0.96
ACTN1-210ENST00000553779 CT62P0C5K7 136 aa9.04□□□□□ -0.96
ACTN1-210ENST00000553779 FOSL1P15407 271 aa9.04□□□□□ -0.96
ACTN1-210ENST00000553779 GPX3P22352 226 aa9.04□□□□□ -0.96
ACTN1-210ENST00000553779 IL12BP29460 328 aa9.04□□□□□ -0.96
ACTN1-210ENST00000553779 CASQ1P31415 396 aa9.04□□□□□ -0.96
ACTN1-210ENST00000553779 FEN1P39748 380 aaKnown RBP9.04□□□□□ -0.96
ACTN1-210ENST00000553779 DCAF7P61962 342 aa9.04□□□□□ -0.96
ACTN1-210ENST00000553779 EXOSC7Q15024 291 aaKnown RBP9.04□□□□□ -0.96
ACTN1-210ENST00000553779 ERCC6LQ2NKX8 1250 aa9.04□□□□□ -0.96
ACTN1-210ENST00000553779 DEFB113Q30KQ7 82 aa9.04□□□□□ -0.96
ACTN1-210ENST00000553779 DCST1Q5T197 706 aa9.04□□□□□ -0.96
ACTN1-210ENST00000553779 C10orf62Q5T681 223 aaPredicted RBP9.04□□□□□ -0.96
ACTN1-210ENST00000553779 TIGD3Q6B0B8 471 aa9.04□□□□□ -0.96
ACTN1-210ENST00000553779 MRM1Q6IN84 353 aaKnown RBP9.04□□□□□ -0.96
ACTN1-210ENST00000553779 SLC30A6Q6NXT4 461 aa9.04□□□□□ -0.96
ACTN1-210ENST00000553779 AAGABQ6PD74 315 aa9.04□□□□□ -0.96
ACTN1-210ENST00000553779 CENPLQ8N0S6 344 aaPredicted RBP9.04□□□□□ -0.96
ACTN1-210ENST00000553779 GCNT2Q8N0V5 402 aa9.04□□□□□ -0.96
ACTN1-210ENST00000553779 ZNF441Q8N8Z8 693 aa9.04□□□□□ -0.96
ACTN1-210ENST00000553779 SPATA4Q8NEY3 305 aa9.04□□□□□ -0.96
ACTN1-210ENST00000553779 FBXO25Q8TCJ0 367 aa9.04□□□□□ -0.96
ACTN1-210ENST00000553779 INTS12Q96CB8 462 aaKnown RBP9.04□□□□□ -0.96
ACTN1-210ENST00000553779 LCORQ96JN0 433 aaPredicted RBP9.04□□□□□ -0.96
ACTN1-210ENST00000553779 SFXN2Q96NB2 322 aa9.04□□□□□ -0.96
ACTN1-210ENST00000553779 ZFP3Q96NJ6 502 aa9.04□□□□□ -0.96
ACTN1-210ENST00000553779 SFXN3Q9BWM7 321 aa9.04□□□□□ -0.96
ACTN1-210ENST00000553779 ZNF717Q9BY31 904 aaPredicted RBP9.04□□□□□ -0.96
ACTN1-210ENST00000553779 MRPL1Q9BYD6 325 aaKnown RBP9.04□□□□□ -0.96
ACTN1-210ENST00000553779 NXF5Q9H1B4 397 aaKnown RBP9.04□□□□□ -0.96
ACTN1-210ENST00000553779 ZNF395Q9H8N7 513 aaPredicted RBP9.04□□□□□ -0.96
ACTN1-210ENST00000553779 CALHM2Q9HA72 323 aa9.04□□□□□ -0.96
ACTN1-210ENST00000553779 GIMAP4Q9NUV9 329 aa9.04□□□□□ -0.96
ACTN1-210ENST00000553779 NMRK1Q9NWW6 199 aa9.04□□□□□ -0.96
ACTN1-210ENST00000553779 GRHL1Q9NZI5 618 aa9.04□□□□□ -0.96
ACTN1-210ENST00000553779 PRODH2Q9UF12 536 aa9.04□□□□□ -0.96
ACTN1-210ENST00000553779 HIVEP2P31629 2446 aa9.04□□□□□ -0.96
ACTN1-210ENST00000553779 VPS13CQ709C8 3753 aa9.03□□□□□ -0.96
ACTN1-210ENST00000553779 C1orf226A1L170 272 aa9.03□□□□□ -0.96
ACTN1-210ENST00000553779 SH3D21A4FU49 640 aa9.03□□□□□ -0.96
ACTN1-210ENST00000553779 C2orf72A6NCS6 295 aa9.03□□□□□ -0.96
ACTN1-210ENST00000553779 MBD3L4A6NDZ8 208 aaPredicted RBP9.03□□□□□ -0.96
ACTN1-210ENST00000553779 MBD3L3A6NE82 208 aaPredicted RBP9.03□□□□□ -0.96
ACTN1-210ENST00000553779 MBD3L5A6NJ08 208 aaPredicted RBP9.03□□□□□ -0.96
ACTN1-210ENST00000553779 SNPHO15079 494 aa9.03□□□□□ -0.96
ACTN1-210ENST00000553779 ACOX3O15254 700 aa9.03□□□□□ -0.96
ACTN1-210ENST00000553779 REM1O75628 298 aa9.03□□□□□ -0.96
ACTN1-210ENST00000553779 SMNDC1O75940 238 aaKnown RBP eCLIP9.03□□□□□ -0.96
ACTN1-210ENST00000553779 GOSR1O95249 250 aa9.03□□□□□ -0.96
ACTN1-210ENST00000553779 ATE1O95260 518 aa9.03□□□□□ -0.96
ACTN1-210ENST00000553779 IL18BPO95998 194 aa9.03□□□□□ -0.96
ACTN1-210ENST00000553779 CLPSP04118 112 aa9.03□□□□□ -0.96
ACTN1-210ENST00000553779 ABCB1P08183 1280 aaPredicted RBP9.03□□□□□ -0.96
ACTN1-210ENST00000553779 RBP1P09455 135 aa9.03□□□□□ -0.96
ACTN1-210ENST00000553779 RHOXF2BP0C7M4 288 aa9.03□□□□□ -0.96
ACTN1-210ENST00000553779 MTHFD2P13995 350 aa9.03□□□□□ -0.96
ACTN1-210ENST00000553779 CSNK2A2P19784 350 aaPredicted RBP9.03□□□□□ -0.96
ACTN1-210ENST00000553779 PTPN6P29350 595 aa9.03□□□□□ -0.96
ACTN1-210ENST00000553779 NAGLUP54802 743 aa9.03□□□□□ -0.96
ACTN1-210ENST00000553779 ADAM8P78325 824 aa9.03□□□□□ -0.96
ACTN1-210ENST00000553779 FUT7Q11130 342 aa9.03□□□□□ -0.96
ACTN1-210ENST00000553779 DAZAP2Q15038 168 aaPredicted RBP9.03□□□□□ -0.96
ACTN1-210ENST00000553779 TSNAXIP1Q2TAA8 658 aa9.03□□□□□ -0.96
ACTN1-210ENST00000553779 C8orf74Q6P047 294 aa9.03□□□□□ -0.96
ACTN1-210ENST00000553779 METTL2BQ6P1Q9 378 aaKnown RBP9.03□□□□□ -0.96
ACTN1-210ENST00000553779 NUP54Q7Z3B4 507 aa9.03□□□□□ -0.96
ACTN1-210ENST00000553779 COMMD6Q7Z4G1 85 aa9.03□□□□□ -0.96
ACTN1-210ENST00000553779 MILR1Q7Z6M3 343 aa9.03□□□□□ -0.96
ACTN1-210ENST00000553779 BIVMQ86UB2 503 aa9.03□□□□□ -0.96
ACTN1-210ENST00000553779 P3H2Q8IVL5 708 aa9.03□□□□□ -0.96
ACTN1-210ENST00000553779 MMP21Q8N119 569 aa9.03□□□□□ -0.96
ACTN1-210ENST00000553779 ZNF615Q8N8J6 731 aa9.03□□□□□ -0.96
ACTN1-210ENST00000553779 CNEP1R1Q8N9A8 125 aa9.03□□□□□ -0.96
ACTN1-210ENST00000553779 L3MBTL4Q8NA19 623 aa9.03□□□□□ -0.96
ACTN1-210ENST00000553779 C9orf106Q8NAJ2 232 aa9.03□□□□□ -0.96
ACTN1-210ENST00000553779 C17orf47Q8NEP4 570 aa9.03□□□□□ -0.96
ACTN1-210ENST00000553779 OR4K17Q8NGC6 315 aa9.03□□□□□ -0.96
ACTN1-210ENST00000553779 OR52B6Q8NGF0 335 aa9.03□□□□□ -0.96
ACTN1-210ENST00000553779 OR52R1Q8NGF1 315 aa9.03□□□□□ -0.96
ACTN1-210ENST00000553779 MBD3L2Q8NHZ7 208 aaPredicted RBP9.03□□□□□ -0.96
ACTN1-210ENST00000553779 WDR20Q8TBZ3 569 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms