RNA–Protein interactions for RNA: ENST00000549891.5

TROAP-211, Transcript of trophinin associated protein, humanhuman

TSL 1 (best)

Gene TROAP, Length 932 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-211ENST00000549891 BRINP2Q9C0B6 783 aa12.37□□□□□ -0.43
TROAP-211ENST00000549891 NXF5Q9H1B4 397 aaKnown RBP12.37□□□□□ -0.43
TROAP-211ENST00000549891 PIGMQ9H3S5 423 aa12.37□□□□□ -0.43
TROAP-211ENST00000549891 GRHL1Q9NZI5 618 aa12.37□□□□□ -0.43
TROAP-211ENST00000549891 KLRF1Q9NZS2 232 aa12.37□□□□□ -0.43
TROAP-211ENST00000549891 NDRG3Q9UGV2 375 aa12.37□□□□□ -0.43
TROAP-211ENST00000549891 EIF3LQ9Y262 564 aaKnown RBP12.37□□□□□ -0.43
TROAP-211ENST00000549891 A0A1W2PS29 197 aa12.36□□□□□ -0.43
TROAP-211ENST00000549891 C1orf226A1L170 272 aa12.36□□□□□ -0.43
TROAP-211ENST00000549891 SH3D21A4FU49 640 aa12.36□□□□□ -0.43
TROAP-211ENST00000549891 ARHGEF9O43307 516 aa12.36□□□□□ -0.43
TROAP-211ENST00000549891 ICOSLGO75144 302 aa12.36□□□□□ -0.43
TROAP-211ENST00000549891 KLK1P06870 262 aa12.36□□□□□ -0.43
TROAP-211ENST00000549891 CD53P19397 219 aa12.36□□□□□ -0.43
TROAP-211ENST00000549891 CHMP24386 653 aa12.36□□□□□ -0.43
TROAP-211ENST00000549891 MAGEA4P43358 317 aa12.36□□□□□ -0.43
TROAP-211ENST00000549891 MAPK12P53778 367 aa12.36□□□□□ -0.43
TROAP-211ENST00000549891 PLTPP55058 493 aa12.36□□□□□ -0.43
TROAP-211ENST00000549891 NKX6-1P78426 367 aaPredicted RBP12.36□□□□□ -0.43
TROAP-211ENST00000549891 MRPS25P82663 173 aaKnown RBP12.36□□□□□ -0.43
TROAP-211ENST00000549891 IRF9Q00978 393 aa12.36□□□□□ -0.43
TROAP-211ENST00000549891 PLCXD2Q0VAA5 305 aa12.36□□□□□ -0.43
TROAP-211ENST00000549891 MAP4K2Q12851 820 aa12.36□□□□□ -0.43
TROAP-211ENST00000549891 IFT88Q13099 833 aa12.36□□□□□ -0.43
TROAP-211ENST00000549891 MROH9Q5TGP6 573 aa12.36□□□□□ -0.43
TROAP-211ENST00000549891 FRG2Q64ET8 278 aa12.36□□□□□ -0.43
TROAP-211ENST00000549891 LUZP2Q86TE4 346 aa12.36□□□□□ -0.43
TROAP-211ENST00000549891 IFNEQ86WN2 208 aa12.36□□□□□ -0.43
TROAP-211ENST00000549891 WNT2BQ93097 391 aa12.36□□□□□ -0.43
TROAP-211ENST00000549891 HGDQ93099 445 aa12.36□□□□□ -0.43
TROAP-211ENST00000549891 OMA1Q96E52 524 aa12.36□□□□□ -0.43
TROAP-211ENST00000549891 LCORQ96JN0 433 aaPredicted RBP12.36□□□□□ -0.43
TROAP-211ENST00000549891 FRG2BQ96QU4 278 aa12.36□□□□□ -0.43
TROAP-211ENST00000549891 UCN2Q96RP3 112 aa12.36□□□□□ -0.43
TROAP-211ENST00000549891 TUBA1CQ9BQE3 449 aa12.36□□□□□ -0.43
TROAP-211ENST00000549891 NTMT1Q9BV86 223 aa12.36□□□□□ -0.43
TROAP-211ENST00000549891 RAB17Q9H0T7 212 aa12.36□□□□□ -0.43
TROAP-211ENST00000549891 NOL11Q9H8H0 719 aaKnown RBP12.36□□□□□ -0.43
TROAP-211ENST00000549891 GALNT8Q9NY28 637 aa12.36□□□□□ -0.43
TROAP-211ENST00000549891 CPSF2Q9P2I0 782 aaKnown RBP12.36□□□□□ -0.43
TROAP-211ENST00000549891 BCAP29Q9UHQ4 241 aa12.36□□□□□ -0.43
TROAP-211ENST00000549891 PSME2Q9UL46 239 aa12.36□□□□□ -0.43
TROAP-211ENST00000549891 TMCO1Q9UM00 188 aa12.36□□□□□ -0.43
TROAP-211ENST00000549891 EXO1Q9UQ84 846 aaKnown RBP12.36□□□□□ -0.43
TROAP-211ENST00000549891 A0A096LPK6 155 aa12.35□□□□□ -0.43
TROAP-211ENST00000549891 LRRC14BA6NHZ5 514 aa12.35□□□□□ -0.43
TROAP-211ENST00000549891 RAD51CO43502 376 aa12.35□□□□□ -0.43
TROAP-211ENST00000549891 SIX3O95343 332 aaPredicted RBP12.35□□□□□ -0.43
TROAP-211ENST00000549891 ATP1B1P05026 303 aa12.35□□□□□ -0.43
TROAP-211ENST00000549891 CSNK2A2P19784 350 aaPredicted RBP12.35□□□□□ -0.43
TROAP-211ENST00000549891 S1PR1P21453 382 aa12.35□□□□□ -0.43
TROAP-211ENST00000549891 TYK2P29597 1187 aa12.35□□□□□ -0.43
TROAP-211ENST00000549891 SRYQ05066 204 aa12.35□□□□□ -0.43
TROAP-211ENST00000549891 FOXF2Q12947 444 aa12.35□□□□□ -0.43
TROAP-211ENST00000549891 NNATQ16517 81 aa12.35□□□□□ -0.43
TROAP-211ENST00000549891 PRICKLE4Q2TBC4 344 aa12.35□□□□□ -0.43
TROAP-211ENST00000549891 SLC48A1Q6P1K1 146 aa12.35□□□□□ -0.43
TROAP-211ENST00000549891 AAGABQ6PD74 315 aa12.35□□□□□ -0.43
TROAP-211ENST00000549891 CLEC9AQ6UXN8 241 aa12.35□□□□□ -0.43
TROAP-211ENST00000549891 ADGRE4PQ86SQ3 457 aa12.35□□□□□ -0.43
TROAP-211ENST00000549891 TRIM42Q8IWZ5 723 aa12.35□□□□□ -0.43
TROAP-211ENST00000549891 SPATA4Q8NEY3 305 aa12.35□□□□□ -0.43
TROAP-211ENST00000549891 INTS12Q96CB8 462 aaKnown RBP12.35□□□□□ -0.43
TROAP-211ENST00000549891 TMCO6Q96DC7 493 aa12.35□□□□□ -0.43
TROAP-211ENST00000549891 CDK15Q96Q40 435 aa12.35□□□□□ -0.43
TROAP-211ENST00000549891 ITPAQ9BY32 194 aa12.35□□□□□ -0.43
TROAP-211ENST00000549891 MRPL1Q9BYD6 325 aaKnown RBP12.35□□□□□ -0.43
TROAP-211ENST00000549891 OR2B2Q9GZK3 357 aa12.35□□□□□ -0.43
TROAP-211ENST00000549891 KCNF1Q9H3M0 494 aa12.35□□□□□ -0.43
TROAP-211ENST00000549891 GALNT9Q9HCQ5 603 aa12.35□□□□□ -0.43
TROAP-211ENST00000549891 PRODH2Q9UF12 536 aa12.35□□□□□ -0.43
TROAP-211ENST00000549891 MAPRE3Q9UPY8 281 aa12.35□□□□□ -0.43
TROAP-211ENST00000549891 DTX4Q9Y2E6 619 aa12.35□□□□□ -0.43
TROAP-211ENST00000549891 PCDHA9Q9Y5H5 950 aa12.35□□□□□ -0.43
TROAP-211ENST00000549891 NSD1Q96L73 2696 aaPredicted RBP12.34□□□□□ -0.43
TROAP-211ENST00000549891 PRAMEF25A6NGN4 478 aa12.34□□□□□ -0.43
TROAP-211ENST00000549891 OR7A17O14581 309 aa12.34□□□□□ -0.43
TROAP-211ENST00000549891 ABCB7O75027 752 aa12.34□□□□□ -0.43
TROAP-211ENST00000549891 ERAL1O75616 437 aaKnown RBP12.34□□□□□ -0.43
TROAP-211ENST00000549891 DRD5P21918 477 aa12.34□□□□□ -0.43
TROAP-211ENST00000549891 SLCO1A2P46721 670 aa12.34□□□□□ -0.43
TROAP-211ENST00000549891 SERPINB8P50452 374 aa12.34□□□□□ -0.43
TROAP-211ENST00000549891 POU4F3Q15319 338 aa12.34□□□□□ -0.43
TROAP-211ENST00000549891 TAOK1Q7L7X3 1001 aa12.34□□□□□ -0.43
TROAP-211ENST00000549891 METTL4Q8N3J2 472 aa12.34□□□□□ -0.43
TROAP-211ENST00000549891 OR52B6Q8NGF0 335 aa12.34□□□□□ -0.43
TROAP-211ENST00000549891 FBXO25Q8TCJ0 367 aa12.34□□□□□ -0.43
TROAP-211ENST00000549891 NODALQ96S42 347 aa12.34□□□□□ -0.43
TROAP-211ENST00000549891 ELOVL6Q9H5J4 265 aa12.34□□□□□ -0.43
TROAP-211ENST00000549891 ZNF395Q9H8N7 513 aaPredicted RBP12.34□□□□□ -0.43
TROAP-211ENST00000549891 SERHLQ9NQF3 203 aa12.34□□□□□ -0.43
TROAP-211ENST00000549891 NMRK1Q9NWW6 199 aa12.34□□□□□ -0.43
TROAP-211ENST00000549891 TAS2R10Q9NYW0 307 aa12.34□□□□□ -0.43
TROAP-211ENST00000549891 MAT2BQ9NZL9 334 aa12.34□□□□□ -0.43
TROAP-211ENST00000549891 ZNF639Q9UID6 485 aa12.34□□□□□ -0.43
TROAP-211ENST00000549891 PACSIN3Q9UKS6 424 aa12.34□□□□□ -0.43
TROAP-211ENST00000549891 ZNF780BQ9Y6R6 833 aa12.34□□□□□ -0.43
TROAP-211ENST00000549891 ARID1AO14497 2285 aa12.34□□□□□ -0.43
TROAP-211ENST00000549891 C2orf72A6NCS6 295 aa12.33□□□□□ -0.44
TROAP-211ENST00000549891 FRG2CA6NGY1 282 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms