RNA–Protein interactions for RNA: ENST00000536265.5

DDX11-208, Transcript of DEAD/H-box helicase 11, human

TSL 5

Gene DDX11, Length 3,603 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDX11-208	ENST00000536265	RHPN2P1	A8MT19	583 aa		10.82	□□□□□ -0.68
DDX11-208	ENST00000536265	TLR4	O00206	839 aa		10.82	□□□□□ -0.68
DDX11-208	ENST00000536265	RDH16	O75452	317 aa		10.82	□□□□□ -0.68
DDX11-208	ENST00000536265	CDC123	O75794	336 aa	Predicted RBP	10.82	□□□□□ -0.68
DDX11-208	ENST00000536265	IFNA16	P05015	189 aa		10.82	□□□□□ -0.68
DDX11-208	ENST00000536265	CHRM4	P08173	479 aa		10.82	□□□□□ -0.68
DDX11-208	ENST00000536265	C21orf59	P57076	290 aa		10.82	□□□□□ -0.68
DDX11-208	ENST00000536265	MVK	Q03426	396 aa		10.82	□□□□□ -0.68
DDX11-208	ENST00000536265	TMED1	Q13445	227 aa		10.82	□□□□□ -0.68
DDX11-208	ENST00000536265	ZNHIT3	Q15649	155 aa	Predicted RBP	10.82	□□□□□ -0.68
DDX11-208	ENST00000536265	SNAP47	Q5SQN1	464 aa		10.82	□□□□□ -0.68
DDX11-208	ENST00000536265	OR5T3	Q8NGG3	340 aa		10.82	□□□□□ -0.68
DDX11-208	ENST00000536265	BAHD1	Q8TBE0	780 aa	Predicted RBP	10.82	□□□□□ -0.68
DDX11-208	ENST00000536265	CDS1	Q92903	461 aa		10.82	□□□□□ -0.68
DDX11-208	ENST00000536265	FOXQ1	Q9C009	403 aa		10.82	□□□□□ -0.68
DDX11-208	ENST00000536265	KLF15	Q9UIH9	416 aa		10.82	□□□□□ -0.68
DDX11-208	ENST00000536265	FAM221B	A6H8Z2	402 aa		10.82	□□□□□ -0.68
DDX11-208	ENST00000536265	OR5K3	A6NET4	321 aa		10.82	□□□□□ -0.68
DDX11-208	ENST00000536265	FOXD2	O60548	495 aa	Predicted RBP	10.82	□□□□□ -0.68
DDX11-208	ENST00000536265	CYP7B1	O75881	506 aa		10.82	□□□□□ -0.68
DDX11-208	ENST00000536265	CPNE6	O95741	557 aa		10.82	□□□□□ -0.68
DDX11-208	ENST00000536265	OXSR1	O95747	527 aa	Predicted RBP	10.82	□□□□□ -0.68
DDX11-208	ENST00000536265	CPM	P14384	443 aa		10.82	□□□□□ -0.68
DDX11-208	ENST00000536265	DCK	P27707	260 aa		10.82	□□□□□ -0.68
DDX11-208	ENST00000536265	ATP6V1E1	P36543	226 aa		10.82	□□□□□ -0.68
DDX11-208	ENST00000536265	FRK	P42685	505 aa	Predicted RBP	10.82	□□□□□ -0.68
DDX11-208	ENST00000536265	DUSP2	Q05923	314 aa		10.82	□□□□□ -0.68
DDX11-208	ENST00000536265	RUNX2	Q13950	521 aa		10.82	□□□□□ -0.68
DDX11-208	ENST00000536265	MED22	Q15528	200 aa		10.82	□□□□□ -0.68
DDX11-208	ENST00000536265	VRK2	Q86Y07	508 aa		10.82	□□□□□ -0.68
DDX11-208	ENST00000536265	SLC16A11	Q8NCK7	471 aa		10.82	□□□□□ -0.68
DDX11-208	ENST00000536265	OR4K5	Q8NGD3	323 aa		10.82	□□□□□ -0.68
DDX11-208	ENST00000536265	NT5C	Q8TCD5	201 aa		10.82	□□□□□ -0.68
DDX11-208	ENST00000536265	CSF3R	Q99062	836 aa		10.82	□□□□□ -0.68
DDX11-208	ENST00000536265	RHNO1	Q9BSD3	238 aa		10.82	□□□□□ -0.68
DDX11-208	ENST00000536265	SERHL2	Q9H4I8	314 aa		10.82	□□□□□ -0.68
DDX11-208	ENST00000536265	GIN1	Q9NXP7	522 aa		10.82	□□□□□ -0.68
DDX11-208	ENST00000536265	TDRD6	O60522	2096 aa	Known RBP	10.82	□□□□□ -0.68
DDX11-208	ENST00000536265	TRIM64C	A6NLI5	447 aa		10.82	□□□□□ -0.68
DDX11-208	ENST00000536265	JUNB	P17275	347 aa	Predicted RBP	10.82	□□□□□ -0.68
DDX11-208	ENST00000536265	ITIH1	P19827	911 aa		10.82	□□□□□ -0.68
DDX11-208	ENST00000536265	MAGEA8	P43361	318 aa		10.82	□□□□□ -0.68
DDX11-208	ENST00000536265	FCRL6	Q6DN72	434 aa		10.82	□□□□□ -0.68
DDX11-208	ENST00000536265	PTCRA	Q6ISU1	281 aa	Predicted RBP	10.82	□□□□□ -0.68
DDX11-208	ENST00000536265	FAM111B	Q6SJ93	734 aa		10.82	□□□□□ -0.68
DDX11-208	ENST00000536265	PRSS48	Q7RTY5	328 aa		10.82	□□□□□ -0.68
DDX11-208	ENST00000536265	GJD3	Q8N144	294 aa		10.82	□□□□□ -0.68
DDX11-208	ENST00000536265	OR6T1	Q8NGN1	323 aa		10.82	□□□□□ -0.68
DDX11-208	ENST00000536265	OR9A4	Q8NGU2	314 aa		10.82	□□□□□ -0.68
DDX11-208	ENST00000536265	TEX47	Q8TBZ9	253 aa		10.82	□□□□□ -0.68
DDX11-208	ENST00000536265	SPACA7	Q96KW9	195 aa		10.82	□□□□□ -0.68
DDX11-208	ENST00000536265	SARG	Q9BW04	601 aa		10.82	□□□□□ -0.68
DDX11-208	ENST00000536265	GABARAPL3	Q9BY60	117 aa		10.82	□□□□□ -0.68
DDX11-208	ENST00000536265	EXOSC4	Q9NPD3	245 aa	Known RBP	10.82	□□□□□ -0.68
DDX11-208	ENST00000536265	GPR83	Q9NYM4	423 aa		10.82	□□□□□ -0.68
DDX11-208	ENST00000536265	GPC6	Q9Y625	555 aa	Predicted RBP	10.82	□□□□□ -0.68
DDX11-208	ENST00000536265	KCNE3	Q9Y6H6	103 aa		10.82	□□□□□ -0.68
DDX11-208	ENST00000536265	LOC100506127	A0A0U1RQW1	187 aa		10.81	□□□□□ -0.68
DDX11-208	ENST00000536265	SEC14L2	O76054	403 aa		10.81	□□□□□ -0.68
DDX11-208	ENST00000536265	UBXN7	O94888	489 aa		10.81	□□□□□ -0.68
DDX11-208	ENST00000536265	PROS1	P07225	676 aa		10.81	□□□□□ -0.68
DDX11-208	ENST00000536265	CHRNB1	P11230	501 aa		10.81	□□□□□ -0.68
DDX11-208	ENST00000536265	CHM	P24386	653 aa		10.81	□□□□□ -0.68
DDX11-208	ENST00000536265	ELAVL4	P26378	380 aa	Known RBP	10.81	□□□□□ -0.68
DDX11-208	ENST00000536265	PPP1CA	P62136	330 aa		10.81	□□□□□ -0.68
DDX11-208	ENST00000536265	SLC35A2	P78381	396 aa		10.81	□□□□□ -0.68
DDX11-208	ENST00000536265	RBM12B	Q8IXT5	1001 aa	Known RBP	10.81	□□□□□ -0.68
DDX11-208	ENST00000536265	AVL9	Q8NBF6	648 aa		10.81	□□□□□ -0.68
DDX11-208	ENST00000536265	OR7G2	Q8NG99	324 aa		10.81	□□□□□ -0.68
DDX11-208	ENST00000536265	HLA-C	Q95604	372 aa		10.81	□□□□□ -0.68
DDX11-208	ENST00000536265	CLIP3	Q96DZ5	547 aa		10.81	□□□□□ -0.68
DDX11-208	ENST00000536265	HSPA12B	Q96MM6	686 aa		10.81	□□□□□ -0.68
DDX11-208	ENST00000536265	TGM7	Q96PF1	710 aa		10.81	□□□□□ -0.68
DDX11-208	ENST00000536265	MCHR1	Q99705	422 aa		10.81	□□□□□ -0.68
DDX11-208	ENST00000536265	PINK1	Q9BXM7	581 aa		10.81	□□□□□ -0.68
DDX11-208	ENST00000536265	LDHAL6B	Q9BYZ2	381 aa	Predicted RBP	10.81	□□□□□ -0.68
DDX11-208	ENST00000536265	TTYH1	Q9H313	450 aa	Predicted RBP	10.81	□□□□□ -0.68
DDX11-208	ENST00000536265	HCN3	Q9P1Z3	774 aa		10.81	□□□□□ -0.68
DDX11-208	ENST00000536265	TRANK1	O15050	2925 aa		10.81	□□□□□ -0.68
DDX11-208	ENST00000536265		A0A0A6YYC8	382 aa	Predicted RBP	10.81	□□□□□ -0.68
DDX11-208	ENST00000536265	PRAMEF25	A6NGN4	478 aa		10.81	□□□□□ -0.68
DDX11-208	ENST00000536265	PRR19	A6NJB7	356 aa		10.81	□□□□□ -0.68
DDX11-208	ENST00000536265		I3L1I5	382 aa	Predicted RBP	10.81	□□□□□ -0.68
DDX11-208	ENST00000536265	CLDN4	O14493	209 aa		10.81	□□□□□ -0.68
DDX11-208	ENST00000536265	LCK	P06239	509 aa		10.81	□□□□□ -0.68
DDX11-208	ENST00000536265	STS	P08842	583 aa		10.81	□□□□□ -0.68
DDX11-208	ENST00000536265	OSM	P13725	252 aa		10.81	□□□□□ -0.68
DDX11-208	ENST00000536265	ST6GAL1	P15907	406 aa		10.81	□□□□□ -0.68
DDX11-208	ENST00000536265	CD36	P16671	472 aa		10.81	□□□□□ -0.68
DDX11-208	ENST00000536265	BMP8B	P34820	402 aa		10.81	□□□□□ -0.68
DDX11-208	ENST00000536265	MLLT3	P42568	568 aa	Predicted RBP	10.81	□□□□□ -0.68
DDX11-208	ENST00000536265	RNF144A	P50876	292 aa	Predicted RBP	10.81	□□□□□ -0.68
DDX11-208	ENST00000536265	HOXC5	Q00444	222 aa		10.81	□□□□□ -0.68
DDX11-208	ENST00000536265	ST3GAL3	Q11203	375 aa		10.81	□□□□□ -0.68
DDX11-208	ENST00000536265	ST3GAL4	Q11206	333 aa		10.81	□□□□□ -0.68
DDX11-208	ENST00000536265	NFATC3	Q12968	1075 aa		10.81	□□□□□ -0.68
DDX11-208	ENST00000536265	SNAPC1	Q16533	368 aa		10.81	□□□□□ -0.68
DDX11-208	ENST00000536265	DEFB133	Q30KQ1	61 aa		10.81	□□□□□ -0.68
DDX11-208	ENST00000536265	CCNJ	Q5T5M9	372 aa		10.81	□□□□□ -0.68
DDX11-208	ENST00000536265	PODNL1	Q6PEZ8	512 aa		10.81	□□□□□ -0.68

Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms