RNA–Protein interactions for RNA: ENST00000523125.5

VEGFA-223, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 541 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-223ENST00000523125 NPDC1Q9NQX5 325 aaPredicted RBP11.34□□□□□ -0.59
VEGFA-223ENST00000523125 SIRT5Q9NXA8 310 aa11.34□□□□□ -0.59
VEGFA-223ENST00000523125 BCAP29Q9UHQ4 241 aa11.34□□□□□ -0.59
VEGFA-223ENST00000523125 UTS2RQ9UKP6 389 aa11.34□□□□□ -0.59
VEGFA-223ENST00000523125 ACAD8Q9UKU7 415 aa11.34□□□□□ -0.59
VEGFA-223ENST00000523125 PLLPQ9Y342 182 aa11.34□□□□□ -0.59
VEGFA-223ENST00000523125 ZNF780BQ9Y6R6 833 aa11.34□□□□□ -0.59
VEGFA-223ENST00000523125 POLQO75417 2590 aa11.33□□□□□ -0.6
VEGFA-223ENST00000523125 A0A0G2JNJ9 132 aa11.33□□□□□ -0.6
VEGFA-223ENST00000523125 GNG14A0A1W2PPG7 69 aa11.33□□□□□ -0.6
VEGFA-223ENST00000523125 NKX2-6A6NCS4 301 aa11.33□□□□□ -0.6
VEGFA-223ENST00000523125 FIGNL2A6NMB9 653 aa11.33□□□□□ -0.6
VEGFA-223ENST00000523125 WDR1O75083 606 aa11.33□□□□□ -0.6
VEGFA-223ENST00000523125 NME6O75414 186 aaPredicted RBP11.33□□□□□ -0.6
VEGFA-223ENST00000523125 PPM1BO75688 479 aa11.33□□□□□ -0.6
VEGFA-223ENST00000523125 SNX4O95219 450 aa11.33□□□□□ -0.6
VEGFA-223ENST00000523125 NAGAP17050 411 aa11.33□□□□□ -0.6
VEGFA-223ENST00000523125 DRD5P21918 477 aa11.33□□□□□ -0.6
VEGFA-223ENST00000523125 TIA1P31483 386 aaKnown RBP eCLIP11.33□□□□□ -0.69e-14■■■□□ 15.1
VEGFA-223ENST00000523125 ADH7P40394 386 aa11.33□□□□□ -0.6
VEGFA-223ENST00000523125 PPICP45877 212 aa11.33□□□□□ -0.6
VEGFA-223ENST00000523125 TRPC1P48995 793 aa11.33□□□□□ -0.6
VEGFA-223ENST00000523125 TMED10P49755 219 aaKnown RBP11.33□□□□□ -0.6
VEGFA-223ENST00000523125 DNAJB13P59910 316 aa11.33□□□□□ -0.6
VEGFA-223ENST00000523125 ACSM2AQ08AH3 577 aa11.33□□□□□ -0.6
VEGFA-223ENST00000523125 CEBPEQ15744 281 aa11.33□□□□□ -0.6
VEGFA-223ENST00000523125 PRSS53Q2L4Q9 553 aa11.33□□□□□ -0.6
VEGFA-223ENST00000523125 ZNF628Q5EBL2 1059 aa11.33□□□□□ -0.6
VEGFA-223ENST00000523125 WLSQ5T9L3 541 aa11.33□□□□□ -0.6
VEGFA-223ENST00000523125 TMEM198Q66K66 360 aa11.33□□□□□ -0.6
VEGFA-223ENST00000523125 ACSM2BQ68CK6 577 aa11.33□□□□□ -0.6
VEGFA-223ENST00000523125 B3GNT6Q6ZMB0 384 aa11.33□□□□□ -0.6
VEGFA-223ENST00000523125 FRMD7Q6ZUT3 714 aa11.33□□□□□ -0.6
VEGFA-223ENST00000523125 CCDC116Q8IYX3 515 aa11.33□□□□□ -0.6
VEGFA-223ENST00000523125 OR52R1Q8NGF1 315 aa11.33□□□□□ -0.6
VEGFA-223ENST00000523125 PUM2Q8TB72 1066 aaKnown RBP eCLIP11.33□□□□□ -0.62e-10■■■■■ 37.7
VEGFA-223ENST00000523125 ZNF675Q8TD23 568 aa11.33□□□□□ -0.6
VEGFA-223ENST00000523125 EPS8L3Q8TE67 593 aaKnown RBP11.33□□□□□ -0.6
VEGFA-223ENST00000523125 HGDQ93099 445 aa11.33□□□□□ -0.6
VEGFA-223ENST00000523125 HSPBAP1Q96EW2 488 aa11.33□□□□□ -0.6
VEGFA-223ENST00000523125 LCORQ96JN0 433 aaPredicted RBP11.33□□□□□ -0.6
VEGFA-223ENST00000523125 GNRHR2Q96P88 292 aa11.33□□□□□ -0.6
VEGFA-223ENST00000523125 OXSMQ9NWU1 459 aa11.33□□□□□ -0.6
VEGFA-223ENST00000523125 Q9UFV3 132 aa11.33□□□□□ -0.6
VEGFA-223ENST00000523125 GRID1Q9ULK0 1009 aa11.33□□□□□ -0.6
VEGFA-223ENST00000523125 SMIM23A6NLE4 172 aa11.32□□□□□ -0.6
VEGFA-223ENST00000523125 HPNP05981 417 aa11.32□□□□□ -0.6
VEGFA-223ENST00000523125 ANXA4P09525 319 aaPredicted RBP11.32□□□□□ -0.6
VEGFA-223ENST00000523125 CT45A8P0DMV1 189 aa11.32□□□□□ -0.6
VEGFA-223ENST00000523125 CT45A9P0DMV2 189 aa11.32□□□□□ -0.6
VEGFA-223ENST00000523125 KRT15P19012 456 aa11.32□□□□□ -0.6
VEGFA-223ENST00000523125 GDF1P27539 372 aa11.32□□□□□ -0.6
VEGFA-223ENST00000523125 PTGDSP41222 190 aa11.32□□□□□ -0.6
VEGFA-223ENST00000523125 CCT5P48643 541 aa11.32□□□□□ -0.6
VEGFA-223ENST00000523125 SLC18A2Q05940 514 aa11.32□□□□□ -0.6
VEGFA-223ENST00000523125 BTKQ06187 659 aa11.32□□□□□ -0.6
VEGFA-223ENST00000523125 CCDC153Q494R4 210 aa11.32□□□□□ -0.6
VEGFA-223ENST00000523125 CT45A2Q5DJT8 189 aa11.32□□□□□ -0.6
VEGFA-223ENST00000523125 C1orf185Q5T7R7 199 aa11.32□□□□□ -0.6
VEGFA-223ENST00000523125 TMEM81Q6P7N7 255 aa11.32□□□□□ -0.6
VEGFA-223ENST00000523125 MEX3BQ6ZN04 569 aaKnown RBP11.32□□□□□ -0.6
VEGFA-223ENST00000523125 NUP54Q7Z3B4 507 aa11.32□□□□□ -0.6
VEGFA-223ENST00000523125 TRIM46Q7Z4K8 759 aa11.32□□□□□ -0.6
VEGFA-223ENST00000523125 PACS2Q86VP3 889 aa11.32□□□□□ -0.6
VEGFA-223ENST00000523125 LIX1LQ8IVB5 337 aa11.32□□□□□ -0.6
VEGFA-223ENST00000523125 OR9A2Q8NGT5 310 aa11.32□□□□□ -0.6
VEGFA-223ENST00000523125 KAT2AQ92830 837 aa11.32□□□□□ -0.6
VEGFA-223ENST00000523125 EXOSC8Q96B26 276 aaKnown RBP11.32□□□□□ -0.6
VEGFA-223ENST00000523125 OMA1Q96E52 524 aa11.32□□□□□ -0.6
VEGFA-223ENST00000523125 TMEM41AQ96HV5 264 aa11.32□□□□□ -0.6
VEGFA-223ENST00000523125 LURAP1Q96LR2 239 aa11.32□□□□□ -0.6
VEGFA-223ENST00000523125 NODALQ96S42 347 aa11.32□□□□□ -0.6
VEGFA-223ENST00000523125 EBPLQ9BY08 206 aa11.32□□□□□ -0.6
VEGFA-223ENST00000523125 EXO5Q9H790 373 aa11.32□□□□□ -0.6
VEGFA-223ENST00000523125 ANKZF1Q9H8Y5 726 aa11.32□□□□□ -0.6
VEGFA-223ENST00000523125 PPCSQ9HAB8 311 aa11.32□□□□□ -0.6
VEGFA-223ENST00000523125 KCNJ16Q9NPI9 418 aa11.32□□□□□ -0.6
VEGFA-223ENST00000523125 SLC35C2Q9NQQ7 365 aa11.32□□□□□ -0.6
VEGFA-223ENST00000523125 EHD3Q9NZN3 535 aa11.32□□□□□ -0.6
VEGFA-223ENST00000523125 B4GALT7Q9UBV7 327 aa11.32□□□□□ -0.6
VEGFA-223ENST00000523125 EXO1Q9UQ84 846 aaKnown RBP11.32□□□□□ -0.6
VEGFA-223ENST00000523125 CFL2Q9Y281 166 aa11.32□□□□□ -0.6
VEGFA-223ENST00000523125 GPR55Q9Y2T6 319 aaPredicted RBP11.32□□□□□ -0.6
VEGFA-223ENST00000523125 C15orf41Q9Y2V0 281 aa11.32□□□□□ -0.6
VEGFA-223ENST00000523125 CCL27Q9Y4X3 112 aa11.32□□□□□ -0.6
VEGFA-223ENST00000523125 PCDHGB3Q9Y5G1 929 aa11.32□□□□□ -0.6
VEGFA-223ENST00000523125 ANKRD17O75179 2603 aaKnown RBP11.32□□□□□ -0.6
VEGFA-223ENST00000523125 HRNRQ86YZ3 2850 aaPredicted RBP11.31□□□□□ -0.6
VEGFA-223ENST00000523125 CCDC151A5D8V7 595 aa11.31□□□□□ -0.6
VEGFA-223ENST00000523125 FRG2CA6NGY1 282 aa11.31□□□□□ -0.6
VEGFA-223ENST00000523125 FAM90A27PA6NNH2 459 aa11.31□□□□□ -0.6
VEGFA-223ENST00000523125 ENO4A6NNW6 628 aa11.31□□□□□ -0.6
VEGFA-223ENST00000523125 KDM4EB2RXH2 506 aaPredicted RBP11.31□□□□□ -0.6
VEGFA-223ENST00000523125 TO15178 435 aa11.31□□□□□ -0.6
VEGFA-223ENST00000523125 ACOX3O15254 700 aa11.31□□□□□ -0.6
VEGFA-223ENST00000523125 ICOSLGO75144 302 aa11.31□□□□□ -0.6
VEGFA-223ENST00000523125 UGT2B11O75310 529 aa11.31□□□□□ -0.6
VEGFA-223ENST00000523125 HOXD4P09016 255 aaPredicted RBP11.31□□□□□ -0.6
VEGFA-223ENST00000523125 GABRA1P14867 456 aa11.31□□□□□ -0.6
VEGFA-223ENST00000523125 CPA3P15088 417 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms