RNA–Protein interactions for RNA: ENST00000515459.5

LMNA-223, Transcript of lamin A/C, humanhuman

TSL 5

Gene LMNA, Length 757 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-223ENST00000515459 SPRP35270 261 aaPredicted RBP14.3□□□□□ -0.12
LMNA-223ENST00000515459 PTGDSP41222 190 aa14.3□□□□□ -0.12
LMNA-223ENST00000515459 MC3RP41968 323 aa14.3□□□□□ -0.12
LMNA-223ENST00000515459 XKP51811 444 aa14.3□□□□□ -0.12
LMNA-223ENST00000515459 GFRA1P56159 465 aa14.3□□□□□ -0.12
LMNA-223ENST00000515459 DLG1Q12959 904 aa14.3□□□□□ -0.12
LMNA-223ENST00000515459 NNATQ16517 81 aa14.3□□□□□ -0.12
LMNA-223ENST00000515459 ACKR1Q16570 336 aa14.3□□□□□ -0.12
LMNA-223ENST00000515459 CPSF6Q16630 551 aaKnown RBP eCLIP14.3□□□□□ -0.12
LMNA-223ENST00000515459 DESI1Q6ICB0 168 aa14.3□□□□□ -0.12
LMNA-223ENST00000515459 CXXC5Q7LFL8 322 aaKnown RBP14.3□□□□□ -0.12
LMNA-223ENST00000515459 TBC1D1Q86TI0 1168 aaPredicted RBP14.3□□□□□ -0.12
LMNA-223ENST00000515459 GRAMD2AQ8IUY3 354 aa14.3□□□□□ -0.12
LMNA-223ENST00000515459 RDH11Q8TC12 318 aa14.3□□□□□ -0.12
LMNA-223ENST00000515459 HGDQ93099 445 aa14.3□□□□□ -0.12
LMNA-223ENST00000515459 CTHRC1Q96CG8 243 aa14.3□□□□□ -0.12
LMNA-223ENST00000515459 PERPQ96FX8 193 aa14.3□□□□□ -0.12
LMNA-223ENST00000515459 WFIKKN1Q96NZ8 548 aa14.3□□□□□ -0.12
LMNA-223ENST00000515459 REPIN1Q9BWE0 567 aaKnown RBP14.3□□□□□ -0.12
LMNA-223ENST00000515459 UBTD1Q9HAC8 227 aa14.3□□□□□ -0.12
LMNA-223ENST00000515459 GALNT9Q9HCQ5 603 aa14.3□□□□□ -0.12
LMNA-223ENST00000515459 CFL2Q9Y281 166 aa14.3□□□□□ -0.12
LMNA-223ENST00000515459 DTX4Q9Y2E6 619 aa14.3□□□□□ -0.12
LMNA-223ENST00000515459 DSCAMO60469 2012 aa14.29□□□□□ -0.12
LMNA-223ENST00000515459 CSPG4Q6UVK1 2322 aa14.29□□□□□ -0.12
LMNA-223ENST00000515459 HIVEP2P31629 2446 aa14.29□□□□□ -0.12
LMNA-223ENST00000515459 TNFSF12-TNFSF13A0A0A6YY99 330 aa14.29□□□□□ -0.12
LMNA-223ENST00000515459 TCRBV9S1A1TA0A576 114 aa14.29□□□□□ -0.12
LMNA-223ENST00000515459 TRIM64A6NGJ6 449 aa14.29□□□□□ -0.12
LMNA-223ENST00000515459 TRIM64BA6NI03 449 aa14.29□□□□□ -0.12
LMNA-223ENST00000515459 FAM159BA6NKW6 160 aa14.29□□□□□ -0.12
LMNA-223ENST00000515459 FOXE1O00358 373 aaPredicted RBP14.29□□□□□ -0.12
LMNA-223ENST00000515459 PLOD2O00469 737 aa14.29□□□□□ -0.12
LMNA-223ENST00000515459 SIAH2O43255 324 aa14.29□□□□□ -0.12
LMNA-223ENST00000515459 TNFSF13O75888 250 aa14.29□□□□□ -0.12
LMNA-223ENST00000515459 LTA4HP09960 611 aaKnown RBP14.29□□□□□ -0.12
LMNA-223ENST00000515459 MTHFD2P13995 350 aa14.29□□□□□ -0.12
LMNA-223ENST00000515459 PORP16435 677 aaPredicted RBP14.29□□□□□ -0.12
LMNA-223ENST00000515459 S1PR1P21453 382 aa14.29□□□□□ -0.12
LMNA-223ENST00000515459 PCYT1AP49585 367 aa14.29□□□□□ -0.12
LMNA-223ENST00000515459 STARP49675 285 aa14.29□□□□□ -0.12
LMNA-223ENST00000515459 FAM27E3Q08E93 113 aa14.29□□□□□ -0.12
LMNA-223ENST00000515459 PLCXD2Q0VAA5 305 aa14.29□□□□□ -0.12
LMNA-223ENST00000515459 AAGABQ6PD74 315 aa14.29□□□□□ -0.12
LMNA-223ENST00000515459 CMC1Q7Z7K0 106 aa14.29□□□□□ -0.12
LMNA-223ENST00000515459 WDSUB1Q8N9V3 476 aa14.29□□□□□ -0.12
LMNA-223ENST00000515459 WDR20Q8TBZ3 569 aa14.29□□□□□ -0.12
LMNA-223ENST00000515459 OMA1Q96E52 524 aa14.29□□□□□ -0.12
LMNA-223ENST00000515459 PIK3IP1Q96FE7 263 aa14.29□□□□□ -0.12
LMNA-223ENST00000515459 LCORQ96JN0 433 aaPredicted RBP14.29□□□□□ -0.12
LMNA-223ENST00000515459 KLHL28Q9NXS3 571 aa14.29□□□□□ -0.12
LMNA-223ENST00000515459 TAS2R10Q9NYW0 307 aa14.29□□□□□ -0.12
LMNA-223ENST00000515459 DLGAP4Q9Y2H0 992 aa14.29□□□□□ -0.12
LMNA-223ENST00000515459 RTTNQ86VV8 2226 aa14.29□□□□□ -0.12
LMNA-223ENST00000515459 A0A1W2PNV4 684 aa14.28□□□□□ -0.12
LMNA-223ENST00000515459 PRAMEF25A6NGN4 478 aa14.28□□□□□ -0.12
LMNA-223ENST00000515459 SYCE1LA8MT33 242 aa14.28□□□□□ -0.12
LMNA-223ENST00000515459 ACOX3O15254 700 aa14.28□□□□□ -0.12
LMNA-223ENST00000515459 SMNDC1O75940 238 aaKnown RBP eCLIP14.28□□□□□ -0.12
LMNA-223ENST00000515459 SEMA3DO95025 777 aa14.28□□□□□ -0.12
LMNA-223ENST00000515459 TGM6O95932 706 aa14.28□□□□□ -0.12
LMNA-223ENST00000515459 CRHP06850 196 aa14.28□□□□□ -0.12
LMNA-223ENST00000515459 ZNF708P17019 499 aa14.28□□□□□ -0.12
LMNA-223ENST00000515459 CRYGSP22914 178 aa14.28□□□□□ -0.12
LMNA-223ENST00000515459 CNTFP26441 200 aa14.28□□□□□ -0.12
LMNA-223ENST00000515459 LHX2P50458 406 aa14.28□□□□□ -0.12
LMNA-223ENST00000515459 NEK2P51955 445 aa14.28□□□□□ -0.12
LMNA-223ENST00000515459 SLMAPQ14BN4 828 aa14.28□□□□□ -0.12
LMNA-223ENST00000515459 GRTP1Q5TC63 336 aa14.28□□□□□ -0.12
LMNA-223ENST00000515459 C20orf204Q6ZNR8 217 aa14.28□□□□□ -0.12
LMNA-223ENST00000515459 CYS1Q717R9 158 aa14.28□□□□□ -0.12
LMNA-223ENST00000515459 RAI1Q7Z5J4 1906 aaPredicted RBP14.28□□□□□ -0.12
LMNA-223ENST00000515459 CTAGE3PQ8IX95 158 aa14.28□□□□□ -0.12
LMNA-223ENST00000515459 DTNBP1Q96EV8 351 aa14.28□□□□□ -0.12
LMNA-223ENST00000515459 FAM111AQ96PZ2 611 aa14.28□□□□□ -0.12
LMNA-223ENST00000515459 SERPINI1Q99574 410 aa14.28□□□□□ -0.12
LMNA-223ENST00000515459 MED18Q9BUE0 208 aa14.28□□□□□ -0.12
LMNA-223ENST00000515459 ITPAQ9BY32 194 aa14.28□□□□□ -0.12
LMNA-223ENST00000515459 BRINP2Q9C0B6 783 aa14.28□□□□□ -0.12
LMNA-223ENST00000515459 SAYSD1Q9NPB0 183 aa14.28□□□□□ -0.12
LMNA-223ENST00000515459 BCAP29Q9UHQ4 241 aa14.28□□□□□ -0.12
LMNA-223ENST00000515459 SNX24Q9Y343 169 aa14.28□□□□□ -0.12
LMNA-223ENST00000515459 RNF11Q9Y3C5 154 aa14.28□□□□□ -0.12
LMNA-223ENST00000515459 TLN2Q9Y4G6 2542 aa14.28□□□□□ -0.12
LMNA-223ENST00000515459 HEATR5AQ86XA9 2040 aa14.27□□□□□ -0.12
LMNA-223ENST00000515459 UGT2B11O75310 529 aa14.27□□□□□ -0.13
LMNA-223ENST00000515459 GFAPP14136 432 aa14.27□□□□□ -0.13
LMNA-223ENST00000515459 CRABP2P29373 138 aa14.27□□□□□ -0.13
LMNA-223ENST00000515459 SRD5A2P31213 254 aa14.27□□□□□ -0.13
LMNA-223ENST00000515459 CD79BP40259 229 aa14.27□□□□□ -0.13
LMNA-223ENST00000515459 CLDN18P56856 261 aa14.27□□□□□ -0.13
LMNA-223ENST00000515459 MAP4K2Q12851 820 aa14.27□□□□□ -0.13
LMNA-223ENST00000515459 GTF2H2Q13888 395 aa14.27□□□□□ -0.13
LMNA-223ENST00000515459 EXOSC7Q15024 291 aaKnown RBP14.27□□□□□ -0.13
LMNA-223ENST00000515459 PFKFB4Q16877 469 aa14.27□□□□□ -0.13
LMNA-223ENST00000515459 PRICKLE4Q2TBC4 344 aa14.27□□□□□ -0.13
LMNA-223ENST00000515459 OR2A2Q6IF42 318 aa14.27□□□□□ -0.13
LMNA-223ENST00000515459 GTF2H2CQ6P1K8 395 aa14.27□□□□□ -0.13
LMNA-223ENST00000515459 C3orf62Q6ZUJ4 267 aa14.27□□□□□ -0.13
LMNA-223ENST00000515459 P4HA3Q7Z4N8 544 aa14.27□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms