RNA–Protein interactions for RNA: ENST00000512590.6

VCAN-208, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 5,923 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-208ENST00000512590 UBAC2Q8NBM4 344 aa8.52□□□□□ -1.05
VCAN-208ENST00000512590 OR4A16Q8NH70 328 aa8.52□□□□□ -1.05
VCAN-208ENST00000512590 CHFRQ96EP1 664 aa8.52□□□□□ -1.05
VCAN-208ENST00000512590 PRAP1Q96NZ9 151 aa8.52□□□□□ -1.05
VCAN-208ENST00000512590 KCNC2Q96PR1 638 aa8.52□□□□□ -1.05
VCAN-208ENST00000512590 RHOJQ9H4E5 214 aa8.52□□□□□ -1.05
VCAN-208ENST00000512590 ACSS1Q9NUB1 689 aaPredicted RBP8.52□□□□□ -1.05
VCAN-208ENST00000512590 PDE10AQ9Y233 779 aa8.52□□□□□ -1.05
VCAN-208ENST00000512590 CLDN7O95471 211 aa8.51□□□□□ -1.05
VCAN-208ENST00000512590 DDAH2O95865 285 aa8.51□□□□□ -1.05
VCAN-208ENST00000512590 APOA2P02652 100 aa8.51□□□□□ -1.05
VCAN-208ENST00000512590 RPS2P15880 293 aaKnown RBP8.51□□□□□ -1.05
VCAN-208ENST00000512590 CDK2P24941 298 aa8.51□□□□□ -1.05
VCAN-208ENST00000512590 PRDX6P30041 224 aa8.51□□□□□ -1.05
VCAN-208ENST00000512590 SLC6A4P31645 630 aa8.51□□□□□ -1.05
VCAN-208ENST00000512590 DAP3P51398 398 aaKnown RBP8.51□□□□□ -1.05
VCAN-208ENST00000512590 TMEM115Q12893 351 aaPredicted RBP8.51□□□□□ -1.05
VCAN-208ENST00000512590 HNRNPDQ14103 355 aaKnown RBP8.51□□□□□ -1.05
VCAN-208ENST00000512590 SERTAD2Q14140 314 aa8.51□□□□□ -1.05
VCAN-208ENST00000512590 GALEQ14376 348 aa8.51□□□□□ -1.05
VCAN-208ENST00000512590 ARL6IP1Q15041 203 aa8.51□□□□□ -1.05
VCAN-208ENST00000512590 DPY19L1Q2PZI1 675 aa8.51□□□□□ -1.05
VCAN-208ENST00000512590 MFSD5Q6N075 450 aa8.51□□□□□ -1.05
VCAN-208ENST00000512590 AHSA2Q719I0 299 aa8.51□□□□□ -1.05
VCAN-208ENST00000512590 NAA40Q86UY6 237 aa8.51□□□□□ -1.05
VCAN-208ENST00000512590 OR5J2Q8NH18 312 aa8.51□□□□□ -1.05
VCAN-208ENST00000512590 HAS2Q92819 552 aa8.51□□□□□ -1.05
VCAN-208ENST00000512590 TECTBQ96PL2 329 aa8.51□□□□□ -1.05
VCAN-208ENST00000512590 OR6C1Q96RD1 312 aa8.51□□□□□ -1.05
VCAN-208ENST00000512590 TMED9Q9BVK6 235 aa8.51□□□□□ -1.05
VCAN-208ENST00000512590 BARX1Q9HBU1 254 aaPredicted RBP8.51□□□□□ -1.05
VCAN-208ENST00000512590 BATF3Q9NR55 127 aa8.51□□□□□ -1.05
VCAN-208ENST00000512590 ADGBQ8N7X0 1667 aa8.51□□□□□ -1.05
VCAN-208ENST00000512590 SCELO95171 688 aa8.51□□□□□ -1.05
VCAN-208ENST00000512590 TBX18O95935 607 aa8.51□□□□□ -1.05
VCAN-208ENST00000512590 NOMO3P69849 1222 aa8.51□□□□□ -1.05
VCAN-208ENST00000512590 NOMO1Q15155 1222 aa8.51□□□□□ -1.05
VCAN-208ENST00000512590 ATP6AP1Q15904 470 aa8.51□□□□□ -1.05
VCAN-208ENST00000512590 TBC1D28Q2M2D7 210 aa8.51□□□□□ -1.05
VCAN-208ENST00000512590 ACSBG2Q5FVE4 666 aa8.51□□□□□ -1.05
VCAN-208ENST00000512590 IER5LQ5T953 404 aa8.51□□□□□ -1.05
VCAN-208ENST00000512590 SLC51AQ86UW1 340 aa8.51□□□□□ -1.05
VCAN-208ENST00000512590 MARCH9Q86YJ5 346 aa8.51□□□□□ -1.05
VCAN-208ENST00000512590 SNX29P2Q8IUI4 249 aa8.51□□□□□ -1.05
VCAN-208ENST00000512590 TOMM5Q8N4H5 51 aa8.51□□□□□ -1.05
VCAN-208ENST00000512590 BPIFCQ8NFQ6 507 aa8.51□□□□□ -1.05
VCAN-208ENST00000512590 OR4D6Q8NGJ1 314 aa8.51□□□□□ -1.05
VCAN-208ENST00000512590 OR10X1Q8NGY0 326 aa8.51□□□□□ -1.05
VCAN-208ENST00000512590 ERGIC2Q96RQ1 377 aa8.51□□□□□ -1.05
VCAN-208ENST00000512590 SCPEP1Q9HB40 452 aa8.51□□□□□ -1.05
VCAN-208ENST00000512590 ERVK13-1Q9NX77 482 aa8.51□□□□□ -1.05
VCAN-208ENST00000512590 B4GALT6Q9UBX8 382 aa8.51□□□□□ -1.05
VCAN-208ENST00000512590 GABRQQ9UN88 632 aa8.51□□□□□ -1.05
VCAN-208ENST00000512590 IDSB3KWA1 339 aa8.51□□□□□ -1.05
VCAN-208ENST00000512590 SOCS2O14508 198 aa8.51□□□□□ -1.05
VCAN-208ENST00000512590 B4GALT4O60513 344 aa8.51□□□□□ -1.05
VCAN-208ENST00000512590 GPX6P59796 221 aa8.51□□□□□ -1.05
VCAN-208ENST00000512590 FMR1Q06787 632 aaKnown RBP eCLIP8.51□□□□□ -1.05
VCAN-208ENST00000512590 KEAP1Q14145 624 aa8.51□□□□□ -1.05
VCAN-208ENST00000512590 EIF4HQ15056 248 aaKnown RBP8.51□□□□□ -1.05
VCAN-208ENST00000512590 FAM74A1Q5RGS3 127 aa8.51□□□□□ -1.05
VCAN-208ENST00000512590 AKR1C8PQ5T2L2 129 aa8.51□□□□□ -1.05
VCAN-208ENST00000512590 SLC18B1Q6NT16 456 aa8.51□□□□□ -1.05
VCAN-208ENST00000512590 GNPDA2Q8TDQ7 276 aa8.51□□□□□ -1.05
VCAN-208ENST00000512590 RNF170Q96K19 258 aa8.51□□□□□ -1.05
VCAN-208ENST00000512590 SUSD3Q96L08 255 aa8.51□□□□□ -1.05
VCAN-208ENST00000512590 OR51I1Q9H343 314 aa8.51□□□□□ -1.05
VCAN-208ENST00000512590 ZNF286AQ9HBT8 521 aa8.51□□□□□ -1.05
VCAN-208ENST00000512590 MYBPHLA2RUH7 354 aa8.51□□□□□ -1.05
VCAN-208ENST00000512590 TRAF3IP2O43734 574 aaPredicted RBP8.51□□□□□ -1.05
VCAN-208ENST00000512590 MYCLP1P12525 358 aaPredicted RBP8.51□□□□□ -1.05
VCAN-208ENST00000512590 SHC2P98077 582 aa8.51□□□□□ -1.05
VCAN-208ENST00000512590 AKR1C1Q04828 323 aa8.51□□□□□ -1.05
VCAN-208ENST00000512590 PTGR1Q14914 329 aa8.51□□□□□ -1.05
VCAN-208ENST00000512590 ECM1Q16610 540 aa8.51□□□□□ -1.05
VCAN-208ENST00000512590 RGS21Q2M5E4 152 aa8.51□□□□□ -1.05
VCAN-208ENST00000512590 NT5DC1Q5TFE4 455 aa8.51□□□□□ -1.05
VCAN-208ENST00000512590 DESI1Q6ICB0 168 aa8.51□□□□□ -1.05
VCAN-208ENST00000512590 SERINC5Q86VE9 423 aa8.51□□□□□ -1.05
VCAN-208ENST00000512590 SFTPA2Q8IWL1 248 aa8.51□□□□□ -1.05
VCAN-208ENST00000512590 SFTPA1Q8IWL2 248 aa8.51□□□□□ -1.05
VCAN-208ENST00000512590 LRRC25Q8N386 305 aaPredicted RBP8.51□□□□□ -1.05
VCAN-208ENST00000512590 TEX29Q8N6K0 151 aa8.51□□□□□ -1.05
VCAN-208ENST00000512590 PHOSPHO2Q8TCD6 241 aa8.51□□□□□ -1.05
VCAN-208ENST00000512590 FCAMRQ8WWV6 532 aa8.51□□□□□ -1.05
VCAN-208ENST00000512590 PIGCQ92535 297 aa8.51□□□□□ -1.05
VCAN-208ENST00000512590 EIF5A2Q9GZV4 153 aaKnown RBP8.51□□□□□ -1.05
VCAN-208ENST00000512590 HEBP1Q9NRV9 189 aa8.51□□□□□ -1.05
VCAN-208ENST00000512590 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.51□□□□□ -1.05
VCAN-208ENST00000512590 RNF212BA8MTL3 300 aa8.5□□□□□ -1.05
VCAN-208ENST00000512590 ORC5O43913 435 aa8.5□□□□□ -1.05
VCAN-208ENST00000512590 CRYABP02511 175 aaKnown RBP8.5□□□□□ -1.05
VCAN-208ENST00000512590 DCNP07585 359 aaKnown RBP8.5□□□□□ -1.05
VCAN-208ENST00000512590 FOSL1P15407 271 aa8.5□□□□□ -1.05
VCAN-208ENST00000512590 NAA10P41227 235 aaPredicted RBP8.5□□□□□ -1.05
VCAN-208ENST00000512590 TAS2R43P59537 309 aa8.5□□□□□ -1.05
VCAN-208ENST00000512590 SNRPD2P62316 118 aaKnown RBP8.5□□□□□ -1.05
VCAN-208ENST00000512590 BRICD5Q6PL45 260 aa8.5□□□□□ -1.05
VCAN-208ENST00000512590 OR8H1Q8NGG4 311 aa8.5□□□□□ -1.05
VCAN-208ENST00000512590 ART4Q93070 314 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms