RNA–Protein interactions for RNA: ENST00000498540.2

TRAF4-212, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 748 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-212ENST00000498540 PIK3IP1Q96FE7 263 aa13.34□□□□□ -0.27
TRAF4-212ENST00000498540 WFIKKN1Q96NZ8 548 aa13.34□□□□□ -0.27
TRAF4-212ENST00000498540 ITPAQ9BY32 194 aa13.34□□□□□ -0.27
TRAF4-212ENST00000498540 ACBD3Q9H3P7 528 aa13.34□□□□□ -0.27
TRAF4-212ENST00000498540 ACTR8Q9H981 624 aa13.34□□□□□ -0.27
TRAF4-212ENST00000498540 KLHL28Q9NXS3 571 aa13.34□□□□□ -0.27
TRAF4-212ENST00000498540 EHD3Q9NZN3 535 aa13.34□□□□□ -0.27
TRAF4-212ENST00000498540 KLRF1Q9NZS2 232 aa13.34□□□□□ -0.27
TRAF4-212ENST00000498540 ATRQ13535 2644 aa13.34□□□□□ -0.27
TRAF4-212ENST00000498540 A0A1W2PNV4 684 aa13.33□□□□□ -0.28
TRAF4-212ENST00000498540 TCRBV9S1A1TA0A576 114 aa13.33□□□□□ -0.28
TRAF4-212ENST00000498540 H0YIV9 168 aa13.33□□□□□ -0.28
TRAF4-212ENST00000498540 PLOD2O00469 737 aa13.33□□□□□ -0.28
TRAF4-212ENST00000498540 UGT2B11O75310 529 aa13.33□□□□□ -0.28
TRAF4-212ENST00000498540 TGM6O95932 706 aa13.33□□□□□ -0.28
TRAF4-212ENST00000498540 RHOXF2BP0C7M4 288 aa13.33□□□□□ -0.28
TRAF4-212ENST00000498540 NT5EP21589 574 aa13.33□□□□□ -0.28
TRAF4-212ENST00000498540 CCKARP32238 428 aa13.33□□□□□ -0.28
TRAF4-212ENST00000498540 PIK3CGP48736 1102 aa13.33□□□□□ -0.28
TRAF4-212ENST00000498540 LHX2P50458 406 aa13.33□□□□□ -0.28
TRAF4-212ENST00000498540 NEK2P51955 445 aa13.33□□□□□ -0.28
TRAF4-212ENST00000498540 PHEXP78562 749 aa13.33□□□□□ -0.28
TRAF4-212ENST00000498540 PPP2R2BQ00005 443 aa13.33□□□□□ -0.28
TRAF4-212ENST00000498540 GAB1Q13480 694 aa13.33□□□□□ -0.28
TRAF4-212ENST00000498540 ACKR1Q16570 336 aa13.33□□□□□ -0.28
TRAF4-212ENST00000498540 CPSF6Q16630 551 aaKnown RBP eCLIP13.33□□□□□ -0.28
TRAF4-212ENST00000498540 C6orf163Q5TEZ5 329 aa13.33□□□□□ -0.28
TRAF4-212ENST00000498540 LIPJQ5W064 366 aa13.33□□□□□ -0.28
TRAF4-212ENST00000498540 IFNEQ86WN2 208 aa13.33□□□□□ -0.28
TRAF4-212ENST00000498540 GRAMD2AQ8IUY3 354 aa13.33□□□□□ -0.28
TRAF4-212ENST00000498540 OR7G1Q8NGA0 311 aa13.33□□□□□ -0.28
TRAF4-212ENST00000498540 OR4K14Q8NGD5 310 aa13.33□□□□□ -0.28
TRAF4-212ENST00000498540 SPATA3Q8NHX4 192 aa13.33□□□□□ -0.28
TRAF4-212ENST00000498540 PPP1R14CQ8TAE6 165 aa13.33□□□□□ -0.28
TRAF4-212ENST00000498540 PYROXD1Q8WU10 500 aa13.33□□□□□ -0.28
TRAF4-212ENST00000498540 CDKL2Q92772 493 aa13.33□□□□□ -0.28
TRAF4-212ENST00000498540 OMA1Q96E52 524 aa13.33□□□□□ -0.28
TRAF4-212ENST00000498540 PIGQQ9BRB3 760 aa13.33□□□□□ -0.28
TRAF4-212ENST00000498540 NMRAL1Q9HBL8 299 aa13.33□□□□□ -0.28
TRAF4-212ENST00000498540 TRPS1Q9UHF7 1281 aa13.33□□□□□ -0.28
TRAF4-212ENST00000498540 EXO1Q9UQ84 846 aaKnown RBP13.33□□□□□ -0.28
TRAF4-212ENST00000498540 ANGPTL3Q9Y5C1 460 aa13.33□□□□□ -0.28
TRAF4-212ENST00000498540 PRAMEF25A6NGN4 478 aa13.32□□□□□ -0.28
TRAF4-212ENST00000498540 FAM159BA6NKW6 160 aa13.32□□□□□ -0.28
TRAF4-212ENST00000498540 EFCAB8A8MWE9 144 aa13.32□□□□□ -0.28
TRAF4-212ENST00000498540 MSTNO14793 375 aa13.32□□□□□ -0.28
TRAF4-212ENST00000498540 CBR3O75828 277 aa13.32□□□□□ -0.28
TRAF4-212ENST00000498540 SMNDC1O75940 238 aaKnown RBP eCLIP13.32□□□□□ -0.283e-7■■■■□ 24.8
TRAF4-212ENST00000498540 CPMP14384 443 aa13.32□□□□□ -0.28
TRAF4-212ENST00000498540 NAGAP17050 411 aa13.32□□□□□ -0.28
TRAF4-212ENST00000498540 MC3RP41968 323 aa13.32□□□□□ -0.28
TRAF4-212ENST00000498540 XKP51811 444 aa13.32□□□□□ -0.28
TRAF4-212ENST00000498540 CLDN18P56856 261 aa13.32□□□□□ -0.28
TRAF4-212ENST00000498540 PLCXD2Q0VAA5 305 aa13.32□□□□□ -0.28
TRAF4-212ENST00000498540 CBLBQ13191 982 aa13.32□□□□□ -0.28
TRAF4-212ENST00000498540 SNTA1Q13424 505 aa13.32□□□□□ -0.28
TRAF4-212ENST00000498540 SLMAPQ14BN4 828 aa13.32□□□□□ -0.28
TRAF4-212ENST00000498540 EXOSC7Q15024 291 aaKnown RBP13.32□□□□□ -0.28
TRAF4-212ENST00000498540 VWA1Q6PCB0 445 aa13.32□□□□□ -0.28
TRAF4-212ENST00000498540 FAM111BQ6SJ93 734 aa13.32□□□□□ -0.28
TRAF4-212ENST00000498540 RAPH1Q70E73 1250 aa13.32□□□□□ -0.28
TRAF4-212ENST00000498540 NUP54Q7Z3B4 507 aa13.32□□□□□ -0.28
TRAF4-212ENST00000498540 WDR20Q8TBZ3 569 aa13.32□□□□□ -0.28
TRAF4-212ENST00000498540 REPS1Q96D71 796 aa13.32□□□□□ -0.28
TRAF4-212ENST00000498540 HS3ST6Q96QI5 342 aa13.32□□□□□ -0.28
TRAF4-212ENST00000498540 SAYSD1Q9NPB0 183 aa13.32□□□□□ -0.28
TRAF4-212ENST00000498540 TAS2R10Q9NYW0 307 aa13.32□□□□□ -0.28
TRAF4-212ENST00000498540 SNX24Q9Y343 169 aa13.32□□□□□ -0.28
TRAF4-212ENST00000498540 RNF11Q9Y3C5 154 aa13.32□□□□□ -0.28
TRAF4-212ENST00000498540 HCRTR2O43614 444 aa13.31□□□□□ -0.28
TRAF4-212ENST00000498540 UGDHO60701 494 aa13.31□□□□□ -0.28
TRAF4-212ENST00000498540 LTA4HP09960 611 aaKnown RBP13.31□□□□□ -0.28
TRAF4-212ENST00000498540 PORP16435 677 aaPredicted RBP13.31□□□□□ -0.28
TRAF4-212ENST00000498540 ZNF708P17019 499 aa13.31□□□□□ -0.28
TRAF4-212ENST00000498540 FPR1P21462 350 aa13.31□□□□□ -0.28
TRAF4-212ENST00000498540 CRYGSP22914 178 aa13.31□□□□□ -0.28
TRAF4-212ENST00000498540 TCEA1P23193 301 aaKnown RBP13.31□□□□□ -0.28
TRAF4-212ENST00000498540 CHMP24386 653 aa13.31□□□□□ -0.28
TRAF4-212ENST00000498540 MGAT2Q10469 447 aa13.31□□□□□ -0.28
TRAF4-212ENST00000498540 PFKFB4Q16877 469 aa13.31□□□□□ -0.28
TRAF4-212ENST00000498540 PRICKLE4Q2TBC4 344 aa13.31□□□□□ -0.28
TRAF4-212ENST00000498540 ZNF474Q6S9Z5 364 aaPredicted RBP13.31□□□□□ -0.28
TRAF4-212ENST00000498540 TBC1D1Q86TI0 1168 aaPredicted RBP13.31□□□□□ -0.28
TRAF4-212ENST00000498540 NXNL1Q96CM4 212 aa13.31□□□□□ -0.28
TRAF4-212ENST00000498540 STARD4Q96DR4 205 aa13.31□□□□□ -0.28
TRAF4-212ENST00000498540 LCORQ96JN0 433 aaPredicted RBP13.31□□□□□ -0.28
TRAF4-212ENST00000498540 MARK4Q96L34 752 aa13.31□□□□□ -0.28
TRAF4-212ENST00000498540 FAM111AQ96PZ2 611 aa13.31□□□□□ -0.28
TRAF4-212ENST00000498540 MED18Q9BUE0 208 aa13.31□□□□□ -0.28
TRAF4-212ENST00000498540 BRINP2Q9C0B6 783 aa13.31□□□□□ -0.28
TRAF4-212ENST00000498540 ZNF226Q9NYT6 803 aa13.31□□□□□ -0.28
TRAF4-212ENST00000498540 MAT2BQ9NZL9 334 aa13.31□□□□□ -0.28
TRAF4-212ENST00000498540 BCAP29Q9UHQ4 241 aa13.31□□□□□ -0.28
TRAF4-212ENST00000498540 FBXL2Q9UKC9 423 aa13.31□□□□□ -0.28
TRAF4-212ENST00000498540 DLGAP4Q9Y2H0 992 aa13.31□□□□□ -0.28
TRAF4-212ENST00000498540 STAB1Q9NY15 2570 aa13.31□□□□□ -0.28
TRAF4-212ENST00000498540 B4DXG7 233 aa13.3□□□□□ -0.28
TRAF4-212ENST00000498540 FOXE1O00358 373 aaPredicted RBP13.3□□□□□ -0.28
TRAF4-212ENST00000498540 SEMA3DO95025 777 aa13.3□□□□□ -0.28
TRAF4-212ENST00000498540 KLK1P06870 262 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms