RNA–Protein interactions for RNA: ENST00000498466.1

CCDC58-207, Transcript of coiled-coil domain containing 58, humanhuman

TSL 2

Gene CCDC58, Length 683 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58-207ENST00000498466 KCNJ5P48544 419 aa12.63□□□□□ -0.39
CCDC58-207ENST00000498466 LHX2P50458 406 aa12.63□□□□□ -0.39
CCDC58-207ENST00000498466 ARFIP1P53367 373 aa12.63□□□□□ -0.39
CCDC58-207ENST00000498466 GFRA1P56159 465 aa12.63□□□□□ -0.39
CCDC58-207ENST00000498466 PHEXP78562 749 aa12.63□□□□□ -0.39
CCDC58-207ENST00000498466 ILF2Q12905 390 aaKnown RBP12.63□□□□□ -0.39
CCDC58-207ENST00000498466 SNTA1Q13424 505 aa12.63□□□□□ -0.39
CCDC58-207ENST00000498466 TMEM81Q6P7N7 255 aa12.63□□□□□ -0.39
CCDC58-207ENST00000498466 VWA1Q6PCB0 445 aa12.63□□□□□ -0.39
CCDC58-207ENST00000498466 PLEKHM3Q6ZWE6 761 aa12.63□□□□□ -0.39
CCDC58-207ENST00000498466 ZNF550Q7Z398 422 aa12.63□□□□□ -0.39
CCDC58-207ENST00000498466 NUP54Q7Z3B4 507 aa12.63□□□□□ -0.39
CCDC58-207ENST00000498466 OR7G1Q8NGA0 311 aa12.63□□□□□ -0.39
CCDC58-207ENST00000498466 HGDQ93099 445 aa12.63□□□□□ -0.39
CCDC58-207ENST00000498466 CTHRC1Q96CG8 243 aa12.63□□□□□ -0.39
CCDC58-207ENST00000498466 STARD4Q96DR4 205 aa12.63□□□□□ -0.39
CCDC58-207ENST00000498466 PGM2Q96G03 612 aa12.63□□□□□ -0.39
CCDC58-207ENST00000498466 MCMBPQ9BTE3 642 aa12.63□□□□□ -0.39
CCDC58-207ENST00000498466 ZNF717Q9BY31 904 aaPredicted RBP12.63□□□□□ -0.39
CCDC58-207ENST00000498466 DDX31Q9H8H2 851 aaKnown RBP12.63□□□□□ -0.39
CCDC58-207ENST00000498466 NUDT4Q9NZJ9 180 aa12.63□□□□□ -0.39
CCDC58-207ENST00000498466 EHD3Q9NZN3 535 aa12.63□□□□□ -0.39
CCDC58-207ENST00000498466 TXNDC16Q9P2K2 825 aa12.63□□□□□ -0.39
CCDC58-207ENST00000498466 DTX4Q9Y2E6 619 aa12.63□□□□□ -0.39
CCDC58-207ENST00000498466 ARID1AO14497 2285 aa12.63□□□□□ -0.39
CCDC58-207ENST00000498466 SUPT3HB4E1H0 165 aa12.62□□□□□ -0.39
CCDC58-207ENST00000498466 SUPT3HO75486 399 aa12.62□□□□□ -0.39
CCDC58-207ENST00000498466 GBAP04062 536 aa12.62□□□□□ -0.39
CCDC58-207ENST00000498466 CRHP06850 196 aa12.62□□□□□ -0.39
CCDC58-207ENST00000498466 CNTFP26441 200 aa12.62□□□□□ -0.39
CCDC58-207ENST00000498466 BSGP35613 385 aa12.62□□□□□ -0.39
CCDC58-207ENST00000498466 PCYT1AP49585 367 aa12.62□□□□□ -0.39
CCDC58-207ENST00000498466 PLCXD2Q0VAA5 305 aa12.62□□□□□ -0.39
CCDC58-207ENST00000498466 PDIA2Q13087 525 aaKnown RBP12.62□□□□□ -0.39
CCDC58-207ENST00000498466 FASTKD3Q14CZ7 662 aaKnown RBP12.62□□□□□ -0.39
CCDC58-207ENST00000498466 OR2A2Q6IF42 318 aa12.62□□□□□ -0.39
CCDC58-207ENST00000498466 HMBOX1Q6NT76 420 aa12.62□□□□□ -0.39
CCDC58-207ENST00000498466 ZNF474Q6S9Z5 364 aaPredicted RBP12.62□□□□□ -0.39
CCDC58-207ENST00000498466 CHMP1BQ7LBR1 199 aa12.62□□□□□ -0.39
CCDC58-207ENST00000498466 NUDT13Q86X67 352 aa12.62□□□□□ -0.39
CCDC58-207ENST00000498466 WDSUB1Q8N9V3 476 aa12.62□□□□□ -0.39
CCDC58-207ENST00000498466 OR4K14Q8NGD5 310 aa12.62□□□□□ -0.39
CCDC58-207ENST00000498466 STAG3L4Q8TBR4 150 aa12.62□□□□□ -0.39
CCDC58-207ENST00000498466 TMEM171Q8WVE6 324 aa12.62□□□□□ -0.39
CCDC58-207ENST00000498466 OMA1Q96E52 524 aa12.62□□□□□ -0.39
CCDC58-207ENST00000498466 SFXN2Q96NB2 322 aa12.62□□□□□ -0.39
CCDC58-207ENST00000498466 OSBPL9Q96SU4 736 aa12.62□□□□□ -0.39
CCDC58-207ENST00000498466 SLC39A3Q9BRY0 314 aa12.62□□□□□ -0.39
CCDC58-207ENST00000498466 OPN3Q9H1Y3 402 aaPredicted RBP12.62□□□□□ -0.39
CCDC58-207ENST00000498466 ALG9Q9H6U8 611 aa12.62□□□□□ -0.39
CCDC58-207ENST00000498466 DLGAP4Q9Y2H0 992 aa12.62□□□□□ -0.39
CCDC58-207ENST00000498466 ANGPTL3Q9Y5C1 460 aa12.62□□□□□ -0.39
CCDC58-207ENST00000498466 PCDHGA11Q9Y5H2 935 aa12.62□□□□□ -0.39
CCDC58-207ENST00000498466 PRAMEF25A6NGN4 478 aa12.61□□□□□ -0.39
CCDC58-207ENST00000498466 C16orf97H3BN30 126 aa12.61□□□□□ -0.39
CCDC58-207ENST00000498466 UBXN8O00124 270 aa12.61□□□□□ -0.39
CCDC58-207ENST00000498466 HCRTR2O43614 444 aa12.61□□□□□ -0.39
CCDC58-207ENST00000498466 UGT2B11O75310 529 aa12.61□□□□□ -0.39
CCDC58-207ENST00000498466 ZNF708P17019 499 aa12.61□□□□□ -0.39
CCDC58-207ENST00000498466 TCEA1P23193 301 aaKnown RBP12.61□□□□□ -0.39
CCDC58-207ENST00000498466 CCKARP32238 428 aa12.61□□□□□ -0.39
CCDC58-207ENST00000498466 XKP51811 444 aa12.61□□□□□ -0.39
CCDC58-207ENST00000498466 CLDN18P56856 261 aa12.61□□□□□ -0.39
CCDC58-207ENST00000498466 SIRPAP78324 504 aa12.61□□□□□ -0.39
CCDC58-207ENST00000498466 DMTNQ08495 405 aa12.61□□□□□ -0.39
CCDC58-207ENST00000498466 BTLAQ7Z6A9 289 aa12.61□□□□□ -0.39
CCDC58-207ENST00000498466 PLCZ1Q86YW0 608 aa12.61□□□□□ -0.39
CCDC58-207ENST00000498466 PHC2Q8IXK0 858 aa12.61□□□□□ -0.39
CCDC58-207ENST00000498466 MEIOBQ8N635 442 aa12.61□□□□□ -0.39
CCDC58-207ENST00000498466 TEX9Q8N6V9 391 aa12.61□□□□□ -0.39
CCDC58-207ENST00000498466 REPS1Q96D71 796 aa12.61□□□□□ -0.39
CCDC58-207ENST00000498466 LCORQ96JN0 433 aaPredicted RBP12.61□□□□□ -0.39
CCDC58-207ENST00000498466 MARK4Q96L34 752 aa12.61□□□□□ -0.39
CCDC58-207ENST00000498466 UBXN10Q96LJ8 280 aa12.61□□□□□ -0.39
CCDC58-207ENST00000498466 ITPAQ9BY32 194 aa12.61□□□□□ -0.39
CCDC58-207ENST00000498466 BRINP2Q9C0B6 783 aa12.61□□□□□ -0.39
CCDC58-207ENST00000498466 CXorf56Q9H5V9 222 aa12.61□□□□□ -0.39
CCDC58-207ENST00000498466 SMYD2Q9NRG4 433 aa12.61□□□□□ -0.39
CCDC58-207ENST00000498466 ELOVL5Q9NYP7 299 aa12.61□□□□□ -0.39
CCDC58-207ENST00000498466 BCAP29Q9UHQ4 241 aa12.61□□□□□ -0.39
CCDC58-207ENST00000498466 DKKL1Q9UK85 242 aa12.61□□□□□ -0.39
CCDC58-207ENST00000498466 CFL2Q9Y281 166 aa12.61□□□□□ -0.39
CCDC58-207ENST00000498466 PPP2R2CQ9Y2T4 447 aa12.61□□□□□ -0.39
CCDC58-207ENST00000498466 SLC22A20A6NK97 555 aa12.6□□□□□ -0.39
CCDC58-207ENST00000498466 ACOX3O15254 700 aa12.6□□□□□ -0.39
CCDC58-207ENST00000498466 LOXP28300 417 aaPredicted RBP12.6□□□□□ -0.39
CCDC58-207ENST00000498466 SRD5A2P31213 254 aa12.6□□□□□ -0.39
CCDC58-207ENST00000498466 GMPRP36959 345 aa12.6□□□□□ -0.39
CCDC58-207ENST00000498466 NR1H2P55055 460 aa12.6□□□□□ -0.39
CCDC58-207ENST00000498466 ATP5J2P56134 94 aa12.6□□□□□ -0.39
CCDC58-207ENST00000498466 RAB10P61026 200 aa12.6□□□□□ -0.39
CCDC58-207ENST00000498466 TNK1Q13470 666 aa12.6□□□□□ -0.39
CCDC58-207ENST00000498466 CUL3Q13618 768 aa12.6□□□□□ -0.39
CCDC58-207ENST00000498466 CPSF6Q16630 551 aaKnown RBP eCLIP12.6□□□□□ -0.39
CCDC58-207ENST00000498466 LIPJQ5W064 366 aa12.6□□□□□ -0.39
CCDC58-207ENST00000498466 ANKRD34AQ69YU3 496 aa12.6□□□□□ -0.39
CCDC58-207ENST00000498466 GAS2L3Q86XJ1 694 aa12.6□□□□□ -0.39
CCDC58-207ENST00000498466 MAPK1IP1LQ8NDC0 245 aa12.6□□□□□ -0.39
CCDC58-207ENST00000498466 ADCY4Q8NFM4 1077 aa12.6□□□□□ -0.39
CCDC58-207ENST00000498466 UBTD2Q8WUN7 234 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms