RNA–Protein interactions for RNA: ENST00000497342.1

CKS1BP2-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 2, humanhuman

BASIC

Gene CKS1BP2, Length 240 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP2-201ENST00000497342 ERRFI1Q9UJM3 462 aaPredicted RBP2.21□□□□□ -2.06
CKS1BP2-201ENST00000497342 NOTCH3Q9UM47 2321 aa2.21□□□□□ -2.06
CKS1BP2-201ENST00000497342 B9D1Q9UPM9 204 aa2.21□□□□□ -2.06
CKS1BP2-201ENST00000497342 FOXJ3Q9UPW0 622 aa2.21□□□□□ -2.06
CKS1BP2-201ENST00000497342 TMED5Q9Y3A6 229 aa2.21□□□□□ -2.06
CKS1BP2-201ENST00000497342 JRKLQ9Y4A0 524 aa2.21□□□□□ -2.06
CKS1BP2-201ENST00000497342 MYLKQ15746 1914 aa2.21□□□□□ -2.06
CKS1BP2-201ENST00000497342 HERC1Q15751 4861 aa2.2□□□□□ -2.06
CKS1BP2-201ENST00000497342 TRRAPQ9Y4A5 3859 aa2.2□□□□□ -2.06
CKS1BP2-201ENST00000497342 ANK3Q12955 4377 aaKnown RBP2.2□□□□□ -2.06
CKS1BP2-201ENST00000497342 COL4A2P08572 1712 aa2.2□□□□□ -2.06
CKS1BP2-201ENST00000497342 TNRC6BQ9UPQ9 1833 aaKnown RBP2.2□□□□□ -2.06
CKS1BP2-201ENST00000497342 IGLV5-52A0A0A0MRZ9 124 aa2.2□□□□□ -2.06
CKS1BP2-201ENST00000497342 LY6G6EA0A0G2JKS1 128 aa2.2□□□□□ -2.06
CKS1BP2-201ENST00000497342 TRBV5-5A0A0J9YX44 114 aa2.2□□□□□ -2.06
CKS1BP2-201ENST00000497342 SMIM35A0A1B0GVV1 85 aa2.2□□□□□ -2.06
CKS1BP2-201ENST00000497342 SRRM4A7MD48 611 aaKnown RBP2.2□□□□□ -2.06
CKS1BP2-201ENST00000497342 TMEM178BH3BS89 294 aa2.2□□□□□ -2.06
CKS1BP2-201ENST00000497342 OVOL3O00110 214 aa2.2□□□□□ -2.06
CKS1BP2-201ENST00000497342 CCSO14618 274 aa2.2□□□□□ -2.06
CKS1BP2-201ENST00000497342 ZNHIT1O43257 154 aa2.2□□□□□ -2.06
CKS1BP2-201ENST00000497342 PAX4O43316 350 aa2.2□□□□□ -2.06
CKS1BP2-201ENST00000497342 RGS14O43566 566 aa2.2□□□□□ -2.06
CKS1BP2-201ENST00000497342 SYT7O43581 403 aa2.2□□□□□ -2.06
CKS1BP2-201ENST00000497342 BUB1O43683 1085 aa2.2□□□□□ -2.06
CKS1BP2-201ENST00000497342 ITM2AO43736 263 aa2.2□□□□□ -2.06
CKS1BP2-201ENST00000497342 CTAG2O75638 210 aa2.2□□□□□ -2.06
CKS1BP2-201ENST00000497342 SURF6O75683 361 aaKnown RBP2.2□□□□□ -2.06
CKS1BP2-201ENST00000497342 RHBDL1O75783 438 aa2.2□□□□□ -2.06
CKS1BP2-201ENST00000497342 SLITRK3O94933 977 aa2.2□□□□□ -2.06
CKS1BP2-201ENST00000497342 BMP10O95393 424 aa2.2□□□□□ -2.06
CKS1BP2-201ENST00000497342 TXNDC12O95881 172 aa2.2□□□□□ -2.06
CKS1BP2-201ENST00000497342 EPOP01588 193 aa2.2□□□□□ -2.06
CKS1BP2-201ENST00000497342 UMODP07911 640 aa2.2□□□□□ -2.06
CKS1BP2-201ENST00000497342 ZNF883P0CG24 379 aa2.2□□□□□ -2.06
CKS1BP2-201ENST00000497342 IGHV4-31P0DP07 118 aa2.2□□□□□ -2.06
CKS1BP2-201ENST00000497342 F3P13726 295 aa2.2□□□□□ -2.06
CKS1BP2-201ENST00000497342 HOXA5P20719 270 aa2.2□□□□□ -2.06
CKS1BP2-201ENST00000497342 CYP2F1P24903 491 aa2.2□□□□□ -2.06
CKS1BP2-201ENST00000497342 SLC1A3P43003 542 aa2.2□□□□□ -2.06
CKS1BP2-201ENST00000497342 NKX2-1P43699 371 aaPredicted RBP2.2□□□□□ -2.06
CKS1BP2-201ENST00000497342 ART1P52961 327 aa2.2□□□□□ -2.06
CKS1BP2-201ENST00000497342 CRYBB1P53674 252 aaPredicted RBP2.2□□□□□ -2.06
CKS1BP2-201ENST00000497342 MLLT10P55197 1068 aa2.2□□□□□ -2.06
CKS1BP2-201ENST00000497342 CLDN17P56750 224 aa2.2□□□□□ -2.06
CKS1BP2-201ENST00000497342 OR1D5P58170 312 aa2.2□□□□□ -2.06
CKS1BP2-201ENST00000497342 B3GALT5-AS1P59052 145 aa2.2□□□□□ -2.06
CKS1BP2-201ENST00000497342 RPL23AP62750 156 aaKnown RBP2.2□□□□□ -2.06
CKS1BP2-201ENST00000497342 NTHL1P78549 312 aa2.2□□□□□ -2.06
CKS1BP2-201ENST00000497342 ZNF415Q09FC8 603 aa2.2□□□□□ -2.06
CKS1BP2-201ENST00000497342 MRPL28Q13084 256 aaKnown RBP2.2□□□□□ -2.06
CKS1BP2-201ENST00000497342 PLA2G7Q13093 441 aa2.2□□□□□ -2.06
CKS1BP2-201ENST00000497342 GPS2Q13227 327 aa2.2□□□□□ -2.06
CKS1BP2-201ENST00000497342 DRP2Q13474 957 aa2.2□□□□□ -2.06
CKS1BP2-201ENST00000497342 MXD4Q14582 209 aaPredicted RBP2.2□□□□□ -2.06
CKS1BP2-201ENST00000497342 PDK3Q15120 406 aa2.2□□□□□ -2.06
CKS1BP2-201ENST00000497342 ZKSCAN8Q15776 578 aaPredicted RBP2.2□□□□□ -2.06
CKS1BP2-201ENST00000497342 TATDN3Q17R31 274 aa2.2□□□□□ -2.06
CKS1BP2-201ENST00000497342 POM121L1PQ3SYA9 428 aa2.2□□□□□ -2.06
CKS1BP2-201ENST00000497342 WASHC2DQ5SRD0 308 aa2.2□□□□□ -2.06
CKS1BP2-201ENST00000497342 OTUD1Q5VV17 481 aaPredicted RBP2.2□□□□□ -2.06
CKS1BP2-201ENST00000497342 SEL1L3Q68CR1 1132 aa2.2□□□□□ -2.06
CKS1BP2-201ENST00000497342 NCR3LG1Q68D85 454 aa2.2□□□□□ -2.06
CKS1BP2-201ENST00000497342 ZNF776Q68DI1 518 aaPredicted RBP2.2□□□□□ -2.06
CKS1BP2-201ENST00000497342 HIST2H2AA3Q6FI13 130 aa2.2□□□□□ -2.06
CKS1BP2-201ENST00000497342 BHLHB9Q6PI77 547 aa2.2□□□□□ -2.06
CKS1BP2-201ENST00000497342 TRIM65Q6PJ69 517 aa2.2□□□□□ -2.06
CKS1BP2-201ENST00000497342 OLFML1Q6UWY5 402 aa2.2□□□□□ -2.06
CKS1BP2-201ENST00000497342 ZNF627Q7L945 461 aa2.2□□□□□ -2.06
CKS1BP2-201ENST00000497342 COX8CQ7Z4L0 72 aa2.2□□□□□ -2.06
CKS1BP2-201ENST00000497342 C17orf64Q86WR6 236 aa2.2□□□□□ -2.06
CKS1BP2-201ENST00000497342 TMEM219Q86XT9 240 aa2.2□□□□□ -2.06
CKS1BP2-201ENST00000497342 PALB2Q86YC2 1186 aa2.2□□□□□ -2.06
CKS1BP2-201ENST00000497342 LDLRAD3Q86YD5 345 aa2.2□□□□□ -2.06
CKS1BP2-201ENST00000497342 ZDHHC17Q8IUH5 632 aa2.2□□□□□ -2.06
CKS1BP2-201ENST00000497342 MISPQ8IVT2 679 aa2.2□□□□□ -2.06
CKS1BP2-201ENST00000497342 CDH26Q8IXH8 852 aa2.2□□□□□ -2.06
CKS1BP2-201ENST00000497342 RCOR2Q8IZ40 523 aa2.2□□□□□ -2.06
CKS1BP2-201ENST00000497342 LSMEM2Q8N112 164 aa2.2□□□□□ -2.06
CKS1BP2-201ENST00000497342 LRRC75A-AS1Q8N1F1 130 aa2.2□□□□□ -2.06
CKS1BP2-201ENST00000497342 ARFGAP1Q8N6T3 406 aa2.2□□□□□ -2.06
CKS1BP2-201ENST00000497342 ZNF114Q8NC26 417 aa2.2□□□□□ -2.06
CKS1BP2-201ENST00000497342 RNF149Q8NC42 400 aa2.2□□□□□ -2.06
CKS1BP2-201ENST00000497342 OR4A16Q8NH70 328 aa2.2□□□□□ -2.06
CKS1BP2-201ENST00000497342 C16orf52Q8NHV5 167 aa2.2□□□□□ -2.06
CKS1BP2-201ENST00000497342 ITFG1Q8TB96 612 aa2.2□□□□□ -2.06
CKS1BP2-201ENST00000497342 SLC38A5Q8WUX1 472 aa2.2□□□□□ -2.06
CKS1BP2-201ENST00000497342 PHLDA1Q8WV24 401 aaPredicted RBP2.2□□□□□ -2.06
CKS1BP2-201ENST00000497342 CTNNBL1Q8WYA6 563 aaPredicted RBP2.2□□□□□ -2.06
CKS1BP2-201ENST00000497342 HSD17B8Q92506 261 aa2.2□□□□□ -2.06
CKS1BP2-201ENST00000497342 ELSPBP1Q96BH3 223 aa2.2□□□□□ -2.06
CKS1BP2-201ENST00000497342 PINX1Q96BK5 328 aaKnown RBP2.2□□□□□ -2.06
CKS1BP2-201ENST00000497342 COQ2Q96H96 371 aa2.2□□□□□ -2.06
CKS1BP2-201ENST00000497342 TPD52L3Q96J77 140 aa2.2□□□□□ -2.06
CKS1BP2-201ENST00000497342 LMLNQ96KR4 655 aa2.2□□□□□ -2.06
CKS1BP2-201ENST00000497342 C20orf173Q96LM9 149 aa2.2□□□□□ -2.06
CKS1BP2-201ENST00000497342 C17orf77Q96MU5 243 aa2.2□□□□□ -2.06
CKS1BP2-201ENST00000497342 CMKLR1Q99788 373 aa2.2□□□□□ -2.06
CKS1BP2-201ENST00000497342 CCDC77Q9BR77 488 aa2.2□□□□□ -2.06
CKS1BP2-201ENST00000497342 ALKBH7Q9BT30 221 aaPredicted RBP2.2□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms