RNA–Protein interactions for RNA: ENST00000496896.1

TRIM4-205, Transcript of tripartite motif containing 4, humanhuman

TSL 5

Gene TRIM4, Length 601 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-205ENST00000496896 SNX24Q9Y343 169 aa3.36□□□□□ -1.87
TRIM4-205ENST00000496896 MRPL11Q9Y3B7 192 aaKnown RBP3.36□□□□□ -1.87
TRIM4-205ENST00000496896 TRPV2Q9Y5S1 764 aa3.36□□□□□ -1.87
TRIM4-205ENST00000496896 MYH11P35749 1972 aa3.36□□□□□ -1.87
TRIM4-205ENST00000496896 ARID2Q68CP9 1835 aa3.35□□□□□ -1.87
TRIM4-205ENST00000496896 SSC5DA1L4H1 1573 aa3.35□□□□□ -1.87
TRIM4-205ENST00000496896 IGLV3-22A0A075B6J6 115 aa3.35□□□□□ -1.87
TRIM4-205ENST00000496896 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP3.35□□□□□ -1.87
TRIM4-205ENST00000496896 TRBC2A0A5B9 178 aa3.35□□□□□ -1.87
TRIM4-205ENST00000496896 LRRD1A4D1F6 860 aa3.35□□□□□ -1.87
TRIM4-205ENST00000496896 ARHGEF35A5YM69 484 aa3.35□□□□□ -1.87
TRIM4-205ENST00000496896 SYNDIG1LA6NDD5 238 aa3.35□□□□□ -1.87
TRIM4-205ENST00000496896 TCP11X1B4DZS4 312 aa3.35□□□□□ -1.87
TRIM4-205ENST00000496896 NPIPB9F8W1W9 429 aa3.35□□□□□ -1.87
TRIM4-205ENST00000496896 K7ENM7 598 aa3.35□□□□□ -1.87
TRIM4-205ENST00000496896 PDLIM1O00151 329 aa3.35□□□□□ -1.87
TRIM4-205ENST00000496896 SLC1A7O00341 560 aa3.35□□□□□ -1.87
TRIM4-205ENST00000496896 SURF4O15260 269 aa3.35□□□□□ -1.87
TRIM4-205ENST00000496896 MSH4O15457 936 aa3.35□□□□□ -1.87
TRIM4-205ENST00000496896 CCDC22O60826 627 aa3.35□□□□□ -1.87
TRIM4-205ENST00000496896 SLITRK3O94933 977 aa3.35□□□□□ -1.87
TRIM4-205ENST00000496896 LSM8O95777 96 aaKnown RBP3.35□□□□□ -1.87
TRIM4-205ENST00000496896 SHBGP04278 402 aa3.35□□□□□ -1.87
TRIM4-205ENST00000496896 POLR2MP0CAP2 368 aa3.35□□□□□ -1.87
TRIM4-205ENST00000496896 AKR1B1P15121 316 aa3.35□□□□□ -1.87
TRIM4-205ENST00000496896 AADACP22760 399 aa3.35□□□□□ -1.87
TRIM4-205ENST00000496896 PTPN4P29074 926 aa3.35□□□□□ -1.87
TRIM4-205ENST00000496896 SFNP31947 248 aa3.35□□□□□ -1.87
TRIM4-205ENST00000496896 RFC4P35249 363 aa3.35□□□□□ -1.87
TRIM4-205ENST00000496896 ZFP36L2P47974 494 aaKnown RBP3.35□□□□□ -1.87
TRIM4-205ENST00000496896 CASP4P49662 377 aa3.35□□□□□ -1.87
TRIM4-205ENST00000496896 AP3M2P53677 418 aa3.35□□□□□ -1.87
TRIM4-205ENST00000496896 DCDC1P59894 354 aa3.35□□□□□ -1.87
TRIM4-205ENST00000496896 MRPS25P82663 173 aaKnown RBP3.35□□□□□ -1.87
TRIM4-205ENST00000496896 XIAPP98170 497 aa3.35□□□□□ -1.87
TRIM4-205ENST00000496896 GTF2BQ00403 316 aa3.35□□□□□ -1.87
TRIM4-205ENST00000496896 ZNF177Q13360 481 aaPredicted RBP3.35□□□□□ -1.87
TRIM4-205ENST00000496896 DYNC1I2Q13409 638 aaKnown RBP3.35□□□□□ -1.87
TRIM4-205ENST00000496896 SIX1Q15475 284 aaPredicted RBP3.35□□□□□ -1.87
TRIM4-205ENST00000496896 TRADDQ15628 312 aa3.35□□□□□ -1.87
TRIM4-205ENST00000496896 UBE2SQ16763 222 aa3.35□□□□□ -1.87
TRIM4-205ENST00000496896 KLHL38Q2WGJ6 581 aa3.35□□□□□ -1.87
TRIM4-205ENST00000496896 MS4A18Q3C1V0 323 aa3.35□□□□□ -1.87
TRIM4-205ENST00000496896 KRTAP13-3Q3SY46 172 aa3.35□□□□□ -1.87
TRIM4-205ENST00000496896 CEP55Q53EZ4 464 aa3.35□□□□□ -1.87
TRIM4-205ENST00000496896 GPR139Q6DWJ6 353 aa3.35□□□□□ -1.87
TRIM4-205ENST00000496896 IRGCQ6NXR0 463 aa3.35□□□□□ -1.87
TRIM4-205ENST00000496896 CENPUQ71F23 418 aa3.35□□□□□ -1.87
TRIM4-205ENST00000496896 IQCHQ86VS3 1027 aa3.35□□□□□ -1.87
TRIM4-205ENST00000496896 VSIG1Q86XK7 387 aa3.35□□□□□ -1.87
TRIM4-205ENST00000496896 MFN1Q8IWA4 741 aa3.35□□□□□ -1.87
TRIM4-205ENST00000496896 FBXL13Q8NEE6 735 aa3.35□□□□□ -1.87
TRIM4-205ENST00000496896 AGAP11Q8TF27 550 aa3.35□□□□□ -1.87
TRIM4-205ENST00000496896 CHPT1Q8WUD6 406 aa3.35□□□□□ -1.87
TRIM4-205ENST00000496896 KCNE4Q8WWG9 221 aa3.35□□□□□ -1.87
TRIM4-205ENST00000496896 ROBO4Q8WZ75 1007 aa3.35□□□□□ -1.87
TRIM4-205ENST00000496896 PROX1Q92786 737 aa3.35□□□□□ -1.87
TRIM4-205ENST00000496896 CNRIP1Q96F85 164 aaPredicted RBP3.35□□□□□ -1.87
TRIM4-205ENST00000496896 C1orf147Q96MC9 270 aaPredicted RBP3.35□□□□□ -1.87
TRIM4-205ENST00000496896 TEKT3Q9BXF9 490 aa3.35□□□□□ -1.87
TRIM4-205ENST00000496896 VCX3BQ9H321 246 aa3.35□□□□□ -1.87
TRIM4-205ENST00000496896 RABEP2Q9H5N1 569 aa3.35□□□□□ -1.87
TRIM4-205ENST00000496896 FAM124BQ9H5Z6 455 aaPredicted RBP3.35□□□□□ -1.87
TRIM4-205ENST00000496896 UBE2TQ9NPD8 197 aaPredicted RBP3.35□□□□□ -1.87
TRIM4-205ENST00000496896 ANKEF1Q9NU02 776 aa3.35□□□□□ -1.87
TRIM4-205ENST00000496896 CYP39A1Q9NYL5 469 aa3.35□□□□□ -1.87
TRIM4-205ENST00000496896 NDUFA13Q9P0J0 144 aa3.35□□□□□ -1.87
TRIM4-205ENST00000496896 PSMC3IPQ9P2W1 217 aaPredicted RBP3.35□□□□□ -1.87
TRIM4-205ENST00000496896 ANAPC5Q9UJX4 755 aa3.35□□□□□ -1.87
TRIM4-205ENST00000496896 NOCTQ9UK39 431 aaKnown RBP3.35□□□□□ -1.87
TRIM4-205ENST00000496896 THSD7AQ9UPZ6 1657 aa3.35□□□□□ -1.87
TRIM4-205ENST00000496896 SCN4AP35499 1836 aa3.35□□□□□ -1.87
TRIM4-205ENST00000496896 NRXN2Q9P2S2 1712 aa3.34□□□□□ -1.87
TRIM4-205ENST00000496896 TRBV4-1A0A0J9YWV2 114 aa3.34□□□□□ -1.87
TRIM4-205ENST00000496896 EXOC1LA0A1B0GW35 172 aa3.34□□□□□ -1.87
TRIM4-205ENST00000496896 GSTTP1A0A1W2PQM5 241 aa3.34□□□□□ -1.87
TRIM4-205ENST00000496896 FAM86B1E9PN63 330 aa3.34□□□□□ -1.87
TRIM4-205ENST00000496896 F5H6K3 240 aa3.34□□□□□ -1.87
TRIM4-205ENST00000496896 G3V2L1 256 aa3.34□□□□□ -1.87
TRIM4-205ENST00000496896 MPHOSPH10O00566 681 aaKnown RBP3.34□□□□□ -1.87
TRIM4-205ENST00000496896 SNAP91O60641 907 aa3.34□□□□□ -1.87
TRIM4-205ENST00000496896 EDF1O60869 148 aaKnown RBP3.34□□□□□ -1.87
TRIM4-205ENST00000496896 NEBLO76041 1014 aa3.34□□□□□ -1.87
TRIM4-205ENST00000496896 PROSCO94903 275 aa3.34□□□□□ -1.87
TRIM4-205ENST00000496896 NXPH4O95158 308 aa3.34□□□□□ -1.87
TRIM4-205ENST00000496896 KRT16P08779 473 aa3.34□□□□□ -1.87
TRIM4-205ENST00000496896 HOXD4P09016 255 aaPredicted RBP3.34□□□□□ -1.87
TRIM4-205ENST00000496896 FAM86B2P0C5J1 330 aa3.34□□□□□ -1.87
TRIM4-205ENST00000496896 KRTAP1-4P0C5Y4 121 aa3.34□□□□□ -1.87
TRIM4-205ENST00000496896 TPBGLP0DKB5 382 aa3.34□□□□□ -1.87
TRIM4-205ENST00000496896 EEF2P13639 858 aaKnown RBP3.34□□□□□ -1.87
TRIM4-205ENST00000496896 CYP11B1P15538 503 aa3.34□□□□□ -1.87
TRIM4-205ENST00000496896 TAC1P20366 129 aa3.34□□□□□ -1.87
TRIM4-205ENST00000496896 EDNRAP25101 427 aa3.34□□□□□ -1.87
TRIM4-205ENST00000496896 IVDP26440 423 aa3.34□□□□□ -1.87
TRIM4-205ENST00000496896 ALDH1B1P30837 517 aa3.34□□□□□ -1.87
TRIM4-205ENST00000496896 VHLP40337 213 aa3.34□□□□□ -1.87
TRIM4-205ENST00000496896 NSFP46459 744 aaKnown RBP3.34□□□□□ -1.87
TRIM4-205ENST00000496896 IFI35P80217 286 aaPredicted RBP3.34□□□□□ -1.87
TRIM4-205ENST00000496896 MESDQ14696 234 aa3.34□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms