RNA–Protein interactions for RNA: ENST00000489130.2

SRRM1-216, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 2

Gene SRRM1, Length 513 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-216ENST00000489130 TOXO94900 526 aa11.5□□□□□ -0.57
SRRM1-216ENST00000489130 ABCB1P08183 1280 aaPredicted RBP11.5□□□□□ -0.57
SRRM1-216ENST00000489130 HOXD4P09016 255 aaPredicted RBP11.5□□□□□ -0.57
SRRM1-216ENST00000489130 GABRA1P14867 456 aa11.5□□□□□ -0.57
SRRM1-216ENST00000489130 PCSK2P16519 638 aa11.5□□□□□ -0.57
SRRM1-216ENST00000489130 SSTR2P30874 369 aa11.5□□□□□ -0.57
SRRM1-216ENST00000489130 CRHR1P34998 444 aa11.5□□□□□ -0.57
SRRM1-216ENST00000489130 CASP3P42574 277 aa11.5□□□□□ -0.57
SRRM1-216ENST00000489130 SLCO1A2P46721 670 aa11.5□□□□□ -0.57
SRRM1-216ENST00000489130 EMDP50402 254 aa11.5□□□□□ -0.57
SRRM1-216ENST00000489130 DNAJB13P59910 316 aa11.5□□□□□ -0.57
SRRM1-216ENST00000489130 DCAF7P61962 342 aa11.5□□□□□ -0.57
SRRM1-216ENST00000489130 MRPS35P82673 323 aaKnown RBP11.5□□□□□ -0.57
SRRM1-216ENST00000489130 CEBPEQ15744 281 aa11.5□□□□□ -0.57
SRRM1-216ENST00000489130 NNATQ16517 81 aa11.5□□□□□ -0.57
SRRM1-216ENST00000489130 TRMT12Q53H54 448 aaKnown RBP11.5□□□□□ -0.57
SRRM1-216ENST00000489130 C1orf185Q5T7R7 199 aa11.5□□□□□ -0.57
SRRM1-216ENST00000489130 FRMD7Q6ZUT3 714 aa11.5□□□□□ -0.57
SRRM1-216ENST00000489130 PACS2Q86VP3 889 aa11.5□□□□□ -0.57
SRRM1-216ENST00000489130 CCDC71Q8IV32 467 aaPredicted RBP11.5□□□□□ -0.57
SRRM1-216ENST00000489130 PRR22Q8IZ63 422 aa11.5□□□□□ -0.57
SRRM1-216ENST00000489130 LIX1Q8N485 282 aa11.5□□□□□ -0.57
SRRM1-216ENST00000489130 CCNYL1Q8N7R7 359 aa11.5□□□□□ -0.57
SRRM1-216ENST00000489130 OR52R1Q8NGF1 315 aa11.5□□□□□ -0.57
SRRM1-216ENST00000489130 RDH11Q8TC12 318 aa11.5□□□□□ -0.57
SRRM1-216ENST00000489130 C16orf78Q8WTQ4 265 aa11.5□□□□□ -0.57
SRRM1-216ENST00000489130 UBLCP1Q8WVY7 318 aaPredicted RBP11.5□□□□□ -0.57
SRRM1-216ENST00000489130 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP11.5□□□□□ -0.57
SRRM1-216ENST00000489130 HGDQ93099 445 aa11.5□□□□□ -0.57
SRRM1-216ENST00000489130 ERP27Q96DN0 273 aa11.5□□□□□ -0.57
SRRM1-216ENST00000489130 LCORQ96JN0 433 aaPredicted RBP11.5□□□□□ -0.57
SRRM1-216ENST00000489130 SHCBP1LQ9BZQ2 653 aa11.5□□□□□ -0.57
SRRM1-216ENST00000489130 UCK2Q9BZX2 261 aa11.5□□□□□ -0.57
SRRM1-216ENST00000489130 SLC6A15Q9H2J7 730 aa11.5□□□□□ -0.57
SRRM1-216ENST00000489130 KCNJ16Q9NPI9 418 aa11.5□□□□□ -0.57
SRRM1-216ENST00000489130 NPDC1Q9NQX5 325 aaPredicted RBP11.5□□□□□ -0.57
SRRM1-216ENST00000489130 EHD3Q9NZN3 535 aa11.5□□□□□ -0.57
SRRM1-216ENST00000489130 PRODH2Q9UF12 536 aa11.5□□□□□ -0.57
SRRM1-216ENST00000489130 BCAP29Q9UHQ4 241 aa11.5□□□□□ -0.57
SRRM1-216ENST00000489130 C15orf41Q9Y2V0 281 aa11.5□□□□□ -0.57
SRRM1-216ENST00000489130 CACNA1CQ13936 2221 aa11.5□□□□□ -0.57
SRRM1-216ENST00000489130 NKX2-6A6NCS4 301 aa11.49□□□□□ -0.57
SRRM1-216ENST00000489130 FRG2CA6NGY1 282 aa11.49□□□□□ -0.57
SRRM1-216ENST00000489130 FAM90A27PA6NNH2 459 aa11.49□□□□□ -0.57
SRRM1-216ENST00000489130 TO15178 435 aa11.49□□□□□ -0.57
SRRM1-216ENST00000489130 BCAS2O75934 225 aaPredicted RBP11.49□□□□□ -0.57
SRRM1-216ENST00000489130 HPNP05981 417 aa11.49□□□□□ -0.57
SRRM1-216ENST00000489130 KRT15P19012 456 aa11.49□□□□□ -0.57
SRRM1-216ENST00000489130 DRD5P21918 477 aa11.49□□□□□ -0.57
SRRM1-216ENST00000489130 GDF1P27539 372 aa11.49□□□□□ -0.57
SRRM1-216ENST00000489130 MSX1P28360 303 aa11.49□□□□□ -0.57
SRRM1-216ENST00000489130 PPICP45877 212 aa11.49□□□□□ -0.57
SRRM1-216ENST00000489130 CCT5P48643 541 aa11.49□□□□□ -0.57
SRRM1-216ENST00000489130 MASP1P48740 699 aa11.49□□□□□ -0.57
SRRM1-216ENST00000489130 CDK9P50750 372 aaKnown RBP11.49□□□□□ -0.57
SRRM1-216ENST00000489130 NAGLUP54802 743 aa11.49□□□□□ -0.57
SRRM1-216ENST00000489130 PLCXD2Q0VAA5 305 aa11.49□□□□□ -0.57
SRRM1-216ENST00000489130 MEX3BQ6ZN04 569 aaKnown RBP11.49□□□□□ -0.57
SRRM1-216ENST00000489130 NUP54Q7Z3B4 507 aa11.49□□□□□ -0.57
SRRM1-216ENST00000489130 TRIM46Q7Z4K8 759 aa11.49□□□□□ -0.57
SRRM1-216ENST00000489130 CCDC116Q8IYX3 515 aa11.49□□□□□ -0.57
SRRM1-216ENST00000489130 EXOSC8Q96B26 276 aaKnown RBP11.49□□□□□ -0.57
SRRM1-216ENST00000489130 OMA1Q96E52 524 aa11.49□□□□□ -0.57
SRRM1-216ENST00000489130 LURAP1Q96LR2 239 aa11.49□□□□□ -0.57
SRRM1-216ENST00000489130 GNRHR2Q96P88 292 aa11.49□□□□□ -0.57
SRRM1-216ENST00000489130 EBPLQ9BY08 206 aa11.49□□□□□ -0.57
SRRM1-216ENST00000489130 PFDN4Q9NQP4 134 aa11.49□□□□□ -0.57
SRRM1-216ENST00000489130 SLC35C2Q9NQQ7 365 aa11.49□□□□□ -0.57
SRRM1-216ENST00000489130 GRID1Q9ULK0 1009 aa11.49□□□□□ -0.57
SRRM1-216ENST00000489130 A0A0G2JNJ9 132 aa11.48□□□□□ -0.57
SRRM1-216ENST00000489130 FAM47E-STBD1D6RA91 191 aa11.48□□□□□ -0.57
SRRM1-216ENST00000489130 ANXA4P09525 319 aaPredicted RBP11.48□□□□□ -0.57
SRRM1-216ENST00000489130 KRT4P19013 534 aa11.48□□□□□ -0.57
SRRM1-216ENST00000489130 DDCP20711 480 aa11.48□□□□□ -0.57
SRRM1-216ENST00000489130 ELAVL4P26378 380 aaKnown RBP11.48□□□□□ -0.57
SRRM1-216ENST00000489130 ADH7P40394 386 aa11.48□□□□□ -0.57
SRRM1-216ENST00000489130 PTGDSP41222 190 aa11.48□□□□□ -0.57
SRRM1-216ENST00000489130 ZFP36L2P47974 494 aaKnown RBP11.48□□□□□ -0.57
SRRM1-216ENST00000489130 TRPC1P48995 793 aa11.48□□□□□ -0.57
SRRM1-216ENST00000489130 BTKQ06187 659 aa11.48□□□□□ -0.57
SRRM1-216ENST00000489130 CRYZQ08257 329 aaKnown RBP11.48□□□□□ -0.57
SRRM1-216ENST00000489130 ZNF763Q0D2J5 394 aa11.48□□□□□ -0.57
SRRM1-216ENST00000489130 SNTA1Q13424 505 aa11.48□□□□□ -0.57
SRRM1-216ENST00000489130 NHSL2Q5HYW2 709 aa11.48□□□□□ -0.57
SRRM1-216ENST00000489130 SPDYAQ5MJ70 313 aa11.48□□□□□ -0.57
SRRM1-216ENST00000489130 RIPPLY2Q5TAB7 128 aa11.48□□□□□ -0.57
SRRM1-216ENST00000489130 TIGD3Q6B0B8 471 aa11.48□□□□□ -0.57
SRRM1-216ENST00000489130 SCIMPQ6UWF3 145 aa11.48□□□□□ -0.57
SRRM1-216ENST00000489130 ULK2Q8IYT8 1036 aa11.48□□□□□ -0.57
SRRM1-216ENST00000489130 OR10Q1Q8NGQ4 319 aa11.48□□□□□ -0.57
SRRM1-216ENST00000489130 OR9A2Q8NGT5 310 aa11.48□□□□□ -0.57
SRRM1-216ENST00000489130 PUM2Q8TB72 1066 aaKnown RBP eCLIP11.48□□□□□ -0.57
SRRM1-216ENST00000489130 EPS8L3Q8TE67 593 aaKnown RBP11.48□□□□□ -0.57
SRRM1-216ENST00000489130 VSTM2LQ96N03 204 aa11.48□□□□□ -0.57
SRRM1-216ENST00000489130 BTBD9Q96Q07 612 aa11.48□□□□□ -0.57
SRRM1-216ENST00000489130 METTL7AQ9H8H3 244 aa11.48□□□□□ -0.57
SRRM1-216ENST00000489130 GIMAP4Q9NUV9 329 aa11.48□□□□□ -0.57
SRRM1-216ENST00000489130 OXSMQ9NWU1 459 aa11.48□□□□□ -0.57
SRRM1-216ENST00000489130 ALKBH4Q9NXW9 302 aa11.48□□□□□ -0.57
SRRM1-216ENST00000489130 Q9UFV3 132 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms