RNA–Protein interactions for RNA: ENST00000487709.1

HMGB1P36-201, Transcript of high mobility group box 1 pseudogene 36, humanhuman

BASIC

Gene HMGB1P36, Length 576 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P36-201ENST00000487709 UCP1P25874 307 aa2.98□□□□□ -1.93
HMGB1P36-201ENST00000487709 FNTAP49354 379 aa2.98□□□□□ -1.93
HMGB1P36-201ENST00000487709 ARHGDIAP52565 204 aa2.98□□□□□ -1.93
HMGB1P36-201ENST00000487709 SLC26A5P58743 744 aa2.98□□□□□ -1.93
HMGB1P36-201ENST00000487709 OSTNP61366 133 aa2.98□□□□□ -1.93
HMGB1P36-201ENST00000487709 ZFP36L1Q07352 338 aaKnown RBP2.98□□□□□ -1.93
HMGB1P36-201ENST00000487709 SMC1AQ14683 1233 aaKnown RBP2.98□□□□□ -1.93
HMGB1P36-201ENST00000487709 PCK2Q16822 640 aa2.98□□□□□ -1.93
HMGB1P36-201ENST00000487709 C15orf32Q32M92 178 aa2.98□□□□□ -1.93
HMGB1P36-201ENST00000487709 AGKQ53H12 422 aa2.98□□□□□ -1.93
HMGB1P36-201ENST00000487709 IRGCQ6NXR0 463 aa2.98□□□□□ -1.93
HMGB1P36-201ENST00000487709 PLBD1Q6P4A8 553 aa2.98□□□□□ -1.93
HMGB1P36-201ENST00000487709 FAM159AQ6UWV7 190 aa2.98□□□□□ -1.93
HMGB1P36-201ENST00000487709 CDC20BQ86Y33 519 aa2.98□□□□□ -1.93
HMGB1P36-201ENST00000487709 ZNF619Q8N2I2 560 aa2.98□□□□□ -1.93
HMGB1P36-201ENST00000487709 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP2.98□□□□□ -1.93
HMGB1P36-201ENST00000487709 RHOXF1Q8NHV9 184 aa2.98□□□□□ -1.93
HMGB1P36-201ENST00000487709 AGAP11Q8TF27 550 aa2.98□□□□□ -1.93
HMGB1P36-201ENST00000487709 LHX4Q969G2 390 aa2.98□□□□□ -1.93
HMGB1P36-201ENST00000487709 TMEM237Q96Q45 408 aa2.98□□□□□ -1.93
HMGB1P36-201ENST00000487709 APOL2Q9BQE5 337 aa2.98□□□□□ -1.93
HMGB1P36-201ENST00000487709 JPH2Q9BR39 696 aaPredicted RBP2.98□□□□□ -1.93
HMGB1P36-201ENST00000487709 ZNF577Q9BSK1 485 aa2.98□□□□□ -1.93
HMGB1P36-201ENST00000487709 APOOQ9BUR5 198 aa2.98□□□□□ -1.93
HMGB1P36-201ENST00000487709 NLNQ9BYT8 704 aa2.98□□□□□ -1.93
HMGB1P36-201ENST00000487709 TRIM9Q9C026 710 aa2.98□□□□□ -1.93
HMGB1P36-201ENST00000487709 KRT23Q9C075 422 aa2.98□□□□□ -1.93
HMGB1P36-201ENST00000487709 GNB4Q9HAV0 340 aa2.98□□□□□ -1.93
HMGB1P36-201ENST00000487709 NRN1Q9NPD7 142 aa2.98□□□□□ -1.93
HMGB1P36-201ENST00000487709 ESM1Q9NQ30 184 aa2.98□□□□□ -1.93
HMGB1P36-201ENST00000487709 CENPMQ9NSP4 180 aa2.98□□□□□ -1.93
HMGB1P36-201ENST00000487709 CLIP2Q9UDT6 1046 aa2.98□□□□□ -1.93
HMGB1P36-201ENST00000487709 MIOXQ9UGB7 285 aa2.98□□□□□ -1.93
HMGB1P36-201ENST00000487709 MTF2Q9Y483 593 aaPredicted RBP2.98□□□□□ -1.93
HMGB1P36-201ENST00000487709 GPRASP1Q5JY77 1395 aa2.98□□□□□ -1.93
HMGB1P36-201ENST00000487709 A0A1W2PPR1 153 aa2.97□□□□□ -1.93
HMGB1P36-201ENST00000487709 PRPSAP2O60256 369 aa2.97□□□□□ -1.93
HMGB1P36-201ENST00000487709 RHBDL1O75783 438 aa2.97□□□□□ -1.93
HMGB1P36-201ENST00000487709 STAM2O75886 525 aa2.97□□□□□ -1.93
HMGB1P36-201ENST00000487709 KBTBD11O94819 623 aa2.97□□□□□ -1.93
HMGB1P36-201ENST00000487709 FAM200BP0CF97 657 aa2.97□□□□□ -1.93
HMGB1P36-201ENST00000487709 HSPA1LP34931 641 aa2.97□□□□□ -1.93
HMGB1P36-201ENST00000487709 METAP1P53582 386 aa2.97□□□□□ -1.93
HMGB1P36-201ENST00000487709 ATXN3P54252 364 aaPredicted RBP2.97□□□□□ -1.93
HMGB1P36-201ENST00000487709 STARD6P59095 220 aa2.97□□□□□ -1.93
HMGB1P36-201ENST00000487709 ABRAXAS2Q15018 415 aa2.97□□□□□ -1.93
HMGB1P36-201ENST00000487709 MICAQ29983 383 aa2.97□□□□□ -1.93
HMGB1P36-201ENST00000487709 TTC31Q49AM3 519 aaPredicted RBP2.97□□□□□ -1.93
HMGB1P36-201ENST00000487709 PARP10Q53GL7 1025 aa2.97□□□□□ -1.93
HMGB1P36-201ENST00000487709 NHLRC3Q5JS37 347 aa2.97□□□□□ -1.93
HMGB1P36-201ENST00000487709 BEND6Q5SZJ8 279 aaPredicted RBP2.97□□□□□ -1.93
HMGB1P36-201ENST00000487709 LEMD1Q68G75 181 aa2.97□□□□□ -1.93
HMGB1P36-201ENST00000487709 TATDN1Q6P1N9 297 aa2.97□□□□□ -1.93
HMGB1P36-201ENST00000487709 SLC22A18ASQ8N1D0 253 aa2.97□□□□□ -1.93
HMGB1P36-201ENST00000487709 SUMF1Q8NBK3 374 aa2.97□□□□□ -1.93
HMGB1P36-201ENST00000487709 RELL2Q8NC24 303 aaPredicted RBP2.97□□□□□ -1.93
HMGB1P36-201ENST00000487709 OR56B1Q8NGI3 324 aa2.97□□□□□ -1.93
HMGB1P36-201ENST00000487709 OR52E1Q8NGJ3 308 aa2.97□□□□□ -1.93
HMGB1P36-201ENST00000487709 WDR36Q8NI36 951 aaKnown RBP2.97□□□□□ -1.93
HMGB1P36-201ENST00000487709 FLVCR1-AS1Q8TAF5 88 aa2.97□□□□□ -1.93
HMGB1P36-201ENST00000487709 VN1R17PQ8TDU5 208 aa2.97□□□□□ -1.93
HMGB1P36-201ENST00000487709 ITLN1Q8WWA0 313 aa2.97□□□□□ -1.93
HMGB1P36-201ENST00000487709 TADA1Q96BN2 335 aa2.97□□□□□ -1.93
HMGB1P36-201ENST00000487709 CCDC28BQ9BUN5 200 aa2.97□□□□□ -1.93
HMGB1P36-201ENST00000487709 TSPY26PQ9H489 355 aa2.97□□□□□ -1.93
HMGB1P36-201ENST00000487709 KLRF1Q9NZS2 232 aa2.97□□□□□ -1.93
HMGB1P36-201ENST00000487709 ZNF581Q9P0T4 197 aa2.97□□□□□ -1.93
HMGB1P36-201ENST00000487709 PURGQ9UJV8 347 aaKnown RBP2.97□□□□□ -1.93
HMGB1P36-201ENST00000487709 FZR1Q9UM11 496 aa2.97□□□□□ -1.93
HMGB1P36-201ENST00000487709 RNF24Q9Y225 148 aa2.97□□□□□ -1.93
HMGB1P36-201ENST00000487709 PIN4Q9Y237 131 aaKnown RBP2.97□□□□□ -1.93
HMGB1P36-201ENST00000487709 GON4LQ3T8J9 2241 aa2.97□□□□□ -1.93
HMGB1P36-201ENST00000487709 COL5A2P05997 1499 aaPredicted RBP2.96□□□□□ -1.93
HMGB1P36-201ENST00000487709 IGHV3OR16-12A0A075B7B8 117 aa2.96□□□□□ -1.94
HMGB1P36-201ENST00000487709 A0A0U1RRA0 63 aa2.96□□□□□ -1.94
HMGB1P36-201ENST00000487709 BICDL2A1A5D9 508 aa2.96□□□□□ -1.94
HMGB1P36-201ENST00000487709 TMEM89A2RUT3 159 aa2.96□□□□□ -1.94
HMGB1P36-201ENST00000487709 MFSD2BA6NFX1 497 aa2.96□□□□□ -1.94
HMGB1P36-201ENST00000487709 ECDO95905 644 aaPredicted RBP2.96□□□□□ -1.94
HMGB1P36-201ENST00000487709 RENP00797 406 aa2.96□□□□□ -1.94
HMGB1P36-201ENST00000487709 CCDC159P0C7I6 412 aa2.96□□□□□ -1.94
HMGB1P36-201ENST00000487709 ETS1P14921 441 aa2.96□□□□□ -1.94
HMGB1P36-201ENST00000487709 CCND2P30279 289 aa2.96□□□□□ -1.94
HMGB1P36-201ENST00000487709 EMDP50402 254 aa2.96□□□□□ -1.94
HMGB1P36-201ENST00000487709 HMGCS2P54868 508 aa2.96□□□□□ -1.94
HMGB1P36-201ENST00000487709 VCPP55072 806 aaKnown RBP2.96□□□□□ -1.94
HMGB1P36-201ENST00000487709 NAAAQ02083 359 aa2.96□□□□□ -1.94
HMGB1P36-201ENST00000487709 PEX6Q13608 980 aa2.96□□□□□ -1.94
HMGB1P36-201ENST00000487709 PDIA5Q14554 519 aa2.96□□□□□ -1.94
HMGB1P36-201ENST00000487709 PPP1R3AQ16821 1122 aa2.96□□□□□ -1.94
HMGB1P36-201ENST00000487709 ACSF3Q4G176 576 aaPredicted RBP2.96□□□□□ -1.94
HMGB1P36-201ENST00000487709 HSP90AA5PQ58FG0 334 aa2.96□□□□□ -1.94
HMGB1P36-201ENST00000487709 LIPKQ5VXJ0 399 aa2.96□□□□□ -1.94
HMGB1P36-201ENST00000487709 RNLSQ5VYX0 342 aa2.96□□□□□ -1.94
HMGB1P36-201ENST00000487709 WDR25Q64LD2 544 aaPredicted RBP2.96□□□□□ -1.94
HMGB1P36-201ENST00000487709 RAET1GQ6H3X3 334 aa2.96□□□□□ -1.94
HMGB1P36-201ENST00000487709 ATRAIDQ6UW56 229 aa2.96□□□□□ -1.94
HMGB1P36-201ENST00000487709 HIPK1Q86Z02 1210 aa2.96□□□□□ -1.94
HMGB1P36-201ENST00000487709 GPD1LQ8N335 351 aa2.96□□□□□ -1.94
HMGB1P36-201ENST00000487709 FGFRL1Q8N441 504 aa2.96□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms