RNA–Protein interactions for RNA: ENST00000482873.6

DDR1-244, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 5

Gene DDR1, Length 2,673 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-244ENST00000482873 HSD3B2P26439 372 aa14.4□□□□□ -0.1
DDR1-244ENST00000482873 PKLRP30613 574 aa14.4□□□□□ -0.1
DDR1-244ENST00000482873 PUM1Q14671 1186 aaKnown RBP eCLIP14.4□□□□□ -0.1
DDR1-244ENST00000482873 ZNF658BQ4V348 819 aaPredicted RBP14.4□□□□□ -0.1
DDR1-244ENST00000482873 CRB2Q5IJ48 1285 aa14.4□□□□□ -0.1
DDR1-244ENST00000482873 MEDAGQ5VYS4 303 aa14.4□□□□□ -0.1
DDR1-244ENST00000482873 TIGD3Q6B0B8 471 aa14.4□□□□□ -0.1
DDR1-244ENST00000482873 FAM71E1Q6IPT2 247 aa14.4□□□□□ -0.1
DDR1-244ENST00000482873 ADGRD2Q7Z7M1 963 aa14.4□□□□□ -0.1
DDR1-244ENST00000482873 MEX3DQ86XN8 651 aaKnown RBP14.4□□□□□ -0.1
DDR1-244ENST00000482873 LRRC56Q8IYG6 542 aaPredicted RBP14.4□□□□□ -0.1
DDR1-244ENST00000482873 CLDN22Q8N7P3 220 aa14.4□□□□□ -0.1
DDR1-244ENST00000482873 ZBED6CLQ96FA7 236 aaPredicted RBP14.4□□□□□ -0.1
DDR1-244ENST00000482873 MAGEB10Q96LZ2 347 aaPredicted RBP14.4□□□□□ -0.1
DDR1-244ENST00000482873 YIPF4Q9BSR8 244 aa14.4□□□□□ -0.1
DDR1-244ENST00000482873 TSSK6Q9BXA6 273 aa14.4□□□□□ -0.1
DDR1-244ENST00000482873 HDHD5Q9BXW7 423 aa14.4□□□□□ -0.1
DDR1-244ENST00000482873 BHLHE41Q9C0J9 482 aaPredicted RBP14.4□□□□□ -0.1
DDR1-244ENST00000482873 TMCC3Q9ULS5 477 aa14.4□□□□□ -0.1
DDR1-244ENST00000482873 MYL12BO14950 172 aa14.39□□□□□ -0.11
DDR1-244ENST00000482873 ARHGEF9O43307 516 aa14.39□□□□□ -0.11
DDR1-244ENST00000482873 PCDH8O95206 1070 aa14.39□□□□□ -0.11
DDR1-244ENST00000482873 PRNPP04156 253 aa14.39□□□□□ -0.11
DDR1-244ENST00000482873 HOXB3P14651 431 aaPredicted RBP14.39□□□□□ -0.11
DDR1-244ENST00000482873 MAP2K3P46734 347 aa14.39□□□□□ -0.11
DDR1-244ENST00000482873 SEC23BQ15437 767 aa14.39□□□□□ -0.11
DDR1-244ENST00000482873 LCN1P1Q5VSP4 162 aa14.39□□□□□ -0.11
DDR1-244ENST00000482873 USP30Q70CQ3 517 aa14.39□□□□□ -0.11
DDR1-244ENST00000482873 PDZD3Q86UT5 571 aa14.39□□□□□ -0.11
DDR1-244ENST00000482873 HORMAD2Q8N7B1 307 aa14.39□□□□□ -0.11
DDR1-244ENST00000482873 TCEANCQ8N8B7 351 aa14.39□□□□□ -0.11
DDR1-244ENST00000482873 OR8D1Q8WZ84 308 aa14.39□□□□□ -0.11
DDR1-244ENST00000482873 SMG7Q92540 1137 aaKnown RBP14.39□□□□□ -0.11
DDR1-244ENST00000482873 ZNF707Q96C28 371 aaPredicted RBP14.39□□□□□ -0.11
DDR1-244ENST00000482873 EFCAB11Q9BUY7 163 aa14.39□□□□□ -0.11
DDR1-244ENST00000482873 KATNB1Q9BVA0 655 aa14.39□□□□□ -0.11
DDR1-244ENST00000482873 SGPP1Q9BX95 441 aa14.39□□□□□ -0.11
DDR1-244ENST00000482873 TMEM38AQ9H6F2 299 aa14.39□□□□□ -0.11
DDR1-244ENST00000482873 SAGE1Q9NXZ1 904 aa14.39□□□□□ -0.11
DDR1-244ENST00000482873 DEC1Q9P2X7 70 aa14.39□□□□□ -0.11
DDR1-244ENST00000482873 NLKQ9UBE8 527 aa14.39□□□□□ -0.11
DDR1-244ENST00000482873 MALT1Q9UDY8 824 aa14.39□□□□□ -0.11
DDR1-244ENST00000482873 KCNN3Q9UGI6 736 aa14.39□□□□□ -0.11
DDR1-244ENST00000482873 HSPB11Q9Y547 144 aa14.39□□□□□ -0.11
DDR1-244ENST00000482873 H3BN98 237 aa14.39□□□□□ -0.11
DDR1-244ENST00000482873 SEMA7AO75326 666 aa14.39□□□□□ -0.11
DDR1-244ENST00000482873 PAPLNO95428 1278 aa14.39□□□□□ -0.11
DDR1-244ENST00000482873 OSMP13725 252 aa14.39□□□□□ -0.11
DDR1-244ENST00000482873 UQCRC1P31930 480 aa14.39□□□□□ -0.11
DDR1-244ENST00000482873 SLC9A3P48764 834 aa14.39□□□□□ -0.11
DDR1-244ENST00000482873 MANFP55145 182 aaKnown RBP14.39□□□□□ -0.11
DDR1-244ENST00000482873 HTRA4P83105 476 aaPredicted RBP14.39□□□□□ -0.11
DDR1-244ENST00000482873 RBBP4Q09028 425 aa14.39□□□□□ -0.11
DDR1-244ENST00000482873 TARDBPQ13148 414 aaKnown RBP eCLIP14.39□□□□□ -0.11
DDR1-244ENST00000482873 UPRTQ96BW1 309 aa14.39□□□□□ -0.11
DDR1-244ENST00000482873 IL23AQ9NPF7 189 aa14.39□□□□□ -0.11
DDR1-244ENST00000482873 ATP6V1HQ9UI12 483 aa14.39□□□□□ -0.11
DDR1-244ENST00000482873 LRRK1Q38SD2 2015 aa14.39□□□□□ -0.11
DDR1-244ENST00000482873 PTPRSQ13332 1948 aa14.39□□□□□ -0.11
DDR1-244ENST00000482873 TSPAN9O75954 239 aa14.38□□□□□ -0.11
DDR1-244ENST00000482873 IFNW1P05000 195 aa14.38□□□□□ -0.11
DDR1-244ENST00000482873 ACADLP28330 430 aa14.38□□□□□ -0.11
DDR1-244ENST00000482873 OPRD1P41143 372 aa14.38□□□□□ -0.11
DDR1-244ENST00000482873 PRKAG1P54619 331 aa14.38□□□□□ -0.11
DDR1-244ENST00000482873 PCBP3P57721 371 aaKnown RBP14.38□□□□□ -0.11
DDR1-244ENST00000482873 LSM11P83369 360 aaKnown RBP eCLIP14.38□□□□□ -0.11
DDR1-244ENST00000482873 FCHO2Q0JRZ9 810 aa14.38□□□□□ -0.11
DDR1-244ENST00000482873 ILKQ13418 452 aa14.38□□□□□ -0.11
DDR1-244ENST00000482873 C1DQ13901 141 aaKnown RBP14.38□□□□□ -0.11
DDR1-244ENST00000482873 ELOAQ14241 798 aaKnown RBP14.38□□□□□ -0.11
DDR1-244ENST00000482873 P2RY14Q15391 338 aa14.38□□□□□ -0.11
DDR1-244ENST00000482873 HNRNPA1L2Q32P51 320 aaKnown RBP14.38□□□□□ -0.11
DDR1-244ENST00000482873 ZNF628Q5EBL2 1059 aa14.38□□□□□ -0.11
DDR1-244ENST00000482873 FAM78AQ5JUQ0 283 aa14.38□□□□□ -0.11
DDR1-244ENST00000482873 TMEM201Q5SNT2 666 aa14.38□□□□□ -0.11
DDR1-244ENST00000482873 HSDL2Q6YN16 418 aa14.38□□□□□ -0.11
DDR1-244ENST00000482873 OR5D16Q8NGK9 328 aa14.38□□□□□ -0.11
DDR1-244ENST00000482873 GOT1L1Q8NHS2 421 aaPredicted RBP14.38□□□□□ -0.11
DDR1-244ENST00000482873 NIPAL2Q9H841 368 aa14.38□□□□□ -0.11
DDR1-244ENST00000482873 ATP13A2Q9NQ11 1180 aa14.38□□□□□ -0.11
DDR1-244ENST00000482873 C12orf4Q9NQ89 552 aa14.38□□□□□ -0.11
DDR1-244ENST00000482873 MCUBQ9NWR8 336 aa14.38□□□□□ -0.11
DDR1-244ENST00000482873 TEX10Q9NXF1 929 aaPredicted RBP14.38□□□□□ -0.11
DDR1-244ENST00000482873 RPL36Q9Y3U8 105 aaKnown RBP14.38□□□□□ -0.11
DDR1-244ENST00000482873 PLEKHM1Q9Y4G2 1056 aa14.38□□□□□ -0.11
DDR1-244ENST00000482873 PLXNA2O75051 1894 aa14.38□□□□□ -0.11
DDR1-244ENST00000482873 ARRDC5A6NEK1 342 aa14.38□□□□□ -0.11
DDR1-244ENST00000482873 FAM157BP0CG42 384 aa14.38□□□□□ -0.11
DDR1-244ENST00000482873 SLC2A2P11168 524 aaPredicted RBP14.38□□□□□ -0.11
DDR1-244ENST00000482873 FOSL1P15407 271 aa14.38□□□□□ -0.11
DDR1-244ENST00000482873 DDX6P26196 483 aaKnown RBP eCLIP14.38□□□□□ -0.11
DDR1-244ENST00000482873 P2RY2P41231 377 aa14.38□□□□□ -0.11
DDR1-244ENST00000482873 CLCNKAP51800 687 aa14.38□□□□□ -0.11
DDR1-244ENST00000482873 MAPK12P53778 367 aa14.38□□□□□ -0.11
DDR1-244ENST00000482873 TRIM40Q6P9F5 258 aa14.38□□□□□ -0.11
DDR1-244ENST00000482873 DEF8Q6ZN54 512 aa14.38□□□□□ -0.11
DDR1-244ENST00000482873 AMIGO1Q86WK6 493 aa14.38□□□□□ -0.11
DDR1-244ENST00000482873 Q8N402 240 aa14.38□□□□□ -0.11
DDR1-244ENST00000482873 RBFOX1Q9NWB1 397 aaKnown RBP14.38□□□□□ -0.11
DDR1-244ENST00000482873 MAT2BQ9NZL9 334 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms