RNA–Protein interactions for RNA: ENST00000476267.1

MRPL55-228, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 3

Gene MRPL55, Length 169 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-228ENST00000476267 GFRA1P56159 465 aa11.94□□□□□ -0.5
MRPL55-228ENST00000476267 RPP38P78345 283 aaKnown RBP11.94□□□□□ -0.5
MRPL55-228ENST00000476267 SNTA1Q13424 505 aa11.94□□□□□ -0.5
MRPL55-228ENST00000476267 EXOSC7Q15024 291 aaKnown RBP11.94□□□□□ -0.5
MRPL55-228ENST00000476267 NNATQ16517 81 aa11.94□□□□□ -0.5
MRPL55-228ENST00000476267 CCNYL2Q5T2Q4 361 aa11.94□□□□□ -0.5
MRPL55-228ENST00000476267 SLC30A6Q6NXT4 461 aa11.94□□□□□ -0.5
MRPL55-228ENST00000476267 KLC3Q6P597 504 aa11.94□□□□□ -0.5
MRPL55-228ENST00000476267 ANGPTL8Q6UXH0 198 aa11.94□□□□□ -0.5
MRPL55-228ENST00000476267 RPS27LQ71UM5 84 aaKnown RBP11.94□□□□□ -0.5
MRPL55-228ENST00000476267 NUP54Q7Z3B4 507 aa11.94□□□□□ -0.5
MRPL55-228ENST00000476267 COMMD6Q7Z4G1 85 aa11.94□□□□□ -0.5
MRPL55-228ENST00000476267 KRTAP1-3Q8IUG1 177 aa11.94□□□□□ -0.5
MRPL55-228ENST00000476267 RELL1Q8IUW5 271 aa11.94□□□□□ -0.5
MRPL55-228ENST00000476267 TMEM151AQ8N4L1 468 aa11.94□□□□□ -0.5
MRPL55-228ENST00000476267 WDSUB1Q8N9V3 476 aa11.94□□□□□ -0.5
MRPL55-228ENST00000476267 OR4F6Q8NGB9 312 aa11.94□□□□□ -0.5
MRPL55-228ENST00000476267 OR1J4Q8NGS1 313 aa11.94□□□□□ -0.5
MRPL55-228ENST00000476267 GOT1L1Q8NHS2 421 aaPredicted RBP11.94□□□□□ -0.5
MRPL55-228ENST00000476267 LINC01560Q8TB33 94 aa11.94□□□□□ -0.5
MRPL55-228ENST00000476267 RNF138Q8WVD3 245 aa11.94□□□□□ -0.5
MRPL55-228ENST00000476267 TM4SF18Q96CE8 201 aa11.94□□□□□ -0.5
MRPL55-228ENST00000476267 MRRFQ96E11 262 aaKnown RBP11.94□□□□□ -0.5
MRPL55-228ENST00000476267 PHF21BQ96EK2 531 aa11.94□□□□□ -0.5
MRPL55-228ENST00000476267 LRRC46Q96FV0 321 aa11.94□□□□□ -0.5
MRPL55-228ENST00000476267 ZNF681Q96N22 645 aa11.94□□□□□ -0.5
MRPL55-228ENST00000476267 TUBA1CQ9BQE3 449 aa11.94□□□□□ -0.5
MRPL55-228ENST00000476267 OSBPL11Q9BXB4 747 aa11.94□□□□□ -0.5
MRPL55-228ENST00000476267 C1QTNF3Q9BXJ4 246 aa11.94□□□□□ -0.5
MRPL55-228ENST00000476267 OR2B2Q9GZK3 357 aa11.94□□□□□ -0.5
MRPL55-228ENST00000476267 GSX1Q9H4S2 264 aaPredicted RBP11.94□□□□□ -0.5
MRPL55-228ENST00000476267 GALNT9Q9HCQ5 603 aa11.94□□□□□ -0.5
MRPL55-228ENST00000476267 FARSBQ9NSD9 589 aaKnown RBP11.94□□□□□ -0.5
MRPL55-228ENST00000476267 NINJ2Q9NZG7 142 aa11.94□□□□□ -0.5
MRPL55-228ENST00000476267 XPR1Q9UBH6 696 aa11.94□□□□□ -0.5
MRPL55-228ENST00000476267 ZNF225Q9UK10 706 aa11.94□□□□□ -0.5
MRPL55-228ENST00000476267 TUBAL3A6NHL2 446 aa11.93□□□□□ -0.5
MRPL55-228ENST00000476267 B4DXG7 233 aa11.93□□□□□ -0.5
MRPL55-228ENST00000476267 PPP6CO00743 305 aa11.93□□□□□ -0.5
MRPL55-228ENST00000476267 TO15178 435 aa11.93□□□□□ -0.5
MRPL55-228ENST00000476267 ACOX3O15254 700 aa11.93□□□□□ -0.5
MRPL55-228ENST00000476267 ICOSLGO75144 302 aa11.93□□□□□ -0.5
MRPL55-228ENST00000476267 UGT2B11O75310 529 aa11.93□□□□□ -0.5
MRPL55-228ENST00000476267 RAF1P04049 648 aa11.93□□□□□ -0.5
MRPL55-228ENST00000476267 PPP2R2AP63151 447 aa11.93□□□□□ -0.5
MRPL55-228ENST00000476267 FOXF2Q12947 444 aa11.93□□□□□ -0.5
MRPL55-228ENST00000476267 LETMD1Q6P1Q0 360 aa11.93□□□□□ -0.5
MRPL55-228ENST00000476267 PAGE2Q7Z2X7 111 aa11.93□□□□□ -0.5
MRPL55-228ENST00000476267 YRDCQ86U90 279 aaKnown RBP11.93□□□□□ -0.5
MRPL55-228ENST00000476267 KIF18BQ86Y91 864 aa11.93□□□□□ -0.5
MRPL55-228ENST00000476267 ZNF483Q8TF39 744 aaPredicted RBP11.93□□□□□ -0.5
MRPL55-228ENST00000476267 SLC44A1Q8WWI5 657 aa11.93□□□□□ -0.5
MRPL55-228ENST00000476267 OMA1Q96E52 524 aa11.93□□□□□ -0.5
MRPL55-228ENST00000476267 CNRIP1Q96F85 164 aaPredicted RBP11.93□□□□□ -0.5
MRPL55-228ENST00000476267 LCORQ96JN0 433 aaPredicted RBP11.93□□□□□ -0.5
MRPL55-228ENST00000476267 VPS11Q9H270 941 aa11.93□□□□□ -0.5
MRPL55-228ENST00000476267 METTL7AQ9H8H3 244 aa11.93□□□□□ -0.5
MRPL55-228ENST00000476267 AHSPQ9NZD4 102 aa11.93□□□□□ -0.5
MRPL55-228ENST00000476267 CLCF1Q9UBD9 225 aa11.93□□□□□ -0.5
MRPL55-228ENST00000476267 TMCO1Q9UM00 188 aa11.93□□□□□ -0.5
MRPL55-228ENST00000476267 EXO1Q9UQ84 846 aaKnown RBP11.93□□□□□ -0.5
MRPL55-228ENST00000476267 CFL2Q9Y281 166 aa11.93□□□□□ -0.5
MRPL55-228ENST00000476267 PLLPQ9Y342 182 aa11.93□□□□□ -0.5
MRPL55-228ENST00000476267 C2orf72A6NCS6 295 aa11.92□□□□□ -0.5
MRPL55-228ENST00000476267 GOLGA6L10A6NI86 522 aa11.92□□□□□ -0.5
MRPL55-228ENST00000476267 RCBTB2O95199 551 aa11.92□□□□□ -0.5
MRPL55-228ENST00000476267 PDYNP01213 254 aa11.92□□□□□ -0.5
MRPL55-228ENST00000476267 HRGP04196 525 aa11.92□□□□□ -0.5
MRPL55-228ENST00000476267 RBP1P09455 135 aa11.92□□□□□ -0.5
MRPL55-228ENST00000476267 TMIGD3P0DMS9 266 aaPredicted RBP11.92□□□□□ -0.5
MRPL55-228ENST00000476267 CSNK2A2P19784 350 aaPredicted RBP11.92□□□□□ -0.5
MRPL55-228ENST00000476267 DRD5P21918 477 aa11.92□□□□□ -0.5
MRPL55-228ENST00000476267 HOXC12P31275 282 aa11.92□□□□□ -0.5
MRPL55-228ENST00000476267 FEN1P39748 380 aaKnown RBP11.92□□□□□ -0.5
MRPL55-228ENST00000476267 PPICP45877 212 aa11.92□□□□□ -0.5
MRPL55-228ENST00000476267 MAPK12P53778 367 aa11.92□□□□□ -0.5
MRPL55-228ENST00000476267 UAP1Q16222 522 aaPredicted RBP11.92□□□□□ -0.5
MRPL55-228ENST00000476267 DEFB113Q30KQ7 82 aa11.92□□□□□ -0.5
MRPL55-228ENST00000476267 TRMT12Q53H54 448 aaKnown RBP11.92□□□□□ -0.5
MRPL55-228ENST00000476267 C6orf163Q5TEZ5 329 aa11.92□□□□□ -0.5
MRPL55-228ENST00000476267 ATP6V1E2Q96A05 226 aa11.92□□□□□ -0.5
MRPL55-228ENST00000476267 SLC35A4Q96G79 324 aa11.92□□□□□ -0.5
MRPL55-228ENST00000476267 ZFP3Q96NJ6 502 aa11.92□□□□□ -0.5
MRPL55-228ENST00000476267 LRRC1Q9BTT6 524 aa11.92□□□□□ -0.5
MRPL55-228ENST00000476267 BRINP2Q9C0B6 783 aa11.92□□□□□ -0.5
MRPL55-228ENST00000476267 BRF2Q9HAW0 419 aa11.92□□□□□ -0.5
MRPL55-228ENST00000476267 EDARQ9UNE0 448 aa11.92□□□□□ -0.5
MRPL55-228ENST00000476267 SLC12A4Q9UP95 1085 aa11.92□□□□□ -0.5
MRPL55-228ENST00000476267 GPR55Q9Y2T6 319 aaPredicted RBP11.92□□□□□ -0.5
MRPL55-228ENST00000476267 PRAMEF25A6NGN4 478 aa11.91□□□□□ -0.5
MRPL55-228ENST00000476267 FRG2CA6NGY1 282 aa11.91□□□□□ -0.5
MRPL55-228ENST00000476267 CLCA1A8K7I4 914 aa11.91□□□□□ -0.5
MRPL55-228ENST00000476267 EEF1E1-BLOC1S5C9J1V9 151 aa11.91□□□□□ -0.5
MRPL55-228ENST00000476267 EEF1E1O43324 174 aaKnown RBP11.91□□□□□ -0.5
MRPL55-228ENST00000476267 CBR3O75828 277 aa11.91□□□□□ -0.5
MRPL55-228ENST00000476267 CTAGE8P0CG41 777 aa11.91□□□□□ -0.5
MRPL55-228ENST00000476267 CYP4B1P13584 511 aa11.91□□□□□ -0.5
MRPL55-228ENST00000476267 KRT15P19012 456 aa11.91□□□□□ -0.5
MRPL55-228ENST00000476267 CNTFP26441 200 aa11.91□□□□□ -0.5
MRPL55-228ENST00000476267 LHX2P50458 406 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms