RNA–Protein interactions for RNA: ENST00000475251.1

SKA3-206, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 2

Gene SKA3, Length 397 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-206ENST00000475251 TMPRSS11DO60235 418 aa11.43□□□□□ -0.58
SKA3-206ENST00000475251 UGDHO60701 494 aa11.43□□□□□ -0.58
SKA3-206ENST00000475251 ICOSLGO75144 302 aa11.43□□□□□ -0.58
SKA3-206ENST00000475251 CRLF1O75462 422 aa11.43□□□□□ -0.58
SKA3-206ENST00000475251 SUPT3HO75486 399 aa11.43□□□□□ -0.58
SKA3-206ENST00000475251 EEDO75530 441 aaKnown RBP11.43□□□□□ -0.58
SKA3-206ENST00000475251 TNFSF13O75888 250 aa11.43□□□□□ -0.58
SKA3-206ENST00000475251 POU2F1P14859 743 aa11.43□□□□□ -0.58
SKA3-206ENST00000475251 NT5EP21589 574 aa11.43□□□□□ -0.58
SKA3-206ENST00000475251 GPX3P22352 226 aa11.43□□□□□ -0.58
SKA3-206ENST00000475251 PTH2RP49190 550 aa11.43□□□□□ -0.58
SKA3-206ENST00000475251 RAB10P61026 200 aa11.43□□□□□ -0.58
SKA3-206ENST00000475251 FAM27E3Q08E93 113 aa11.43□□□□□ -0.58
SKA3-206ENST00000475251 PLCXD2Q0VAA5 305 aa11.43□□□□□ -0.58
SKA3-206ENST00000475251 FGFBP1Q14512 234 aa11.43□□□□□ -0.58
SKA3-206ENST00000475251 PLEKHM3Q6ZWE6 761 aa11.43□□□□□ -0.58
SKA3-206ENST00000475251 GBP7Q8N8V2 638 aaPredicted RBP11.43□□□□□ -0.58
SKA3-206ENST00000475251 OR4K14Q8NGD5 310 aa11.43□□□□□ -0.58
SKA3-206ENST00000475251 CAVIN3Q969G5 261 aa11.43□□□□□ -0.58
SKA3-206ENST00000475251 TMCO6Q96DC7 493 aa11.43□□□□□ -0.58
SKA3-206ENST00000475251 UBXN10Q96LJ8 280 aa11.43□□□□□ -0.58
SKA3-206ENST00000475251 GPR22Q99680 433 aa11.43□□□□□ -0.58
SKA3-206ENST00000475251 CPNE1Q99829 537 aa11.43□□□□□ -0.58
SKA3-206ENST00000475251 ZNF717Q9BY31 904 aaPredicted RBP11.43□□□□□ -0.58
SKA3-206ENST00000475251 CXorf56Q9H5V9 222 aa11.43□□□□□ -0.58
SKA3-206ENST00000475251 NMRAL1Q9HBL8 299 aa11.43□□□□□ -0.58
SKA3-206ENST00000475251 SERHLQ9NQF3 203 aa11.43□□□□□ -0.58
SKA3-206ENST00000475251 TAS2R10Q9NYW0 307 aa11.43□□□□□ -0.58
SKA3-206ENST00000475251 ADAM21Q9UKJ8 722 aa11.43□□□□□ -0.58
SKA3-206ENST00000475251 EXPH5Q8NEV8 1989 aa11.43□□□□□ -0.58
SKA3-206ENST00000475251 ARID1AO14497 2285 aa11.42□□□□□ -0.58
SKA3-206ENST00000475251 PRAMEF25A6NGN4 478 aa11.42□□□□□ -0.58
SKA3-206ENST00000475251 GOLGA6L10A6NI86 522 aa11.42□□□□□ -0.58
SKA3-206ENST00000475251 SYCE1LA8MT33 242 aa11.42□□□□□ -0.58
SKA3-206ENST00000475251 C16orf97H3BN30 126 aa11.42□□□□□ -0.58
SKA3-206ENST00000475251 HCRTR2O43614 444 aa11.42□□□□□ -0.58
SKA3-206ENST00000475251 KERAO60938 352 aa11.42□□□□□ -0.58
SKA3-206ENST00000475251 SEMA3DO95025 777 aa11.42□□□□□ -0.58
SKA3-206ENST00000475251 PAX1P15863 534 aa11.42□□□□□ -0.58
SKA3-206ENST00000475251 ZNF708P17019 499 aa11.42□□□□□ -0.58
SKA3-206ENST00000475251 SRD5A2P31213 254 aa11.42□□□□□ -0.58
SKA3-206ENST00000475251 BSGP35613 385 aa11.42□□□□□ -0.58
SKA3-206ENST00000475251 UGT2B10P36537 528 aa11.42□□□□□ -0.58
SKA3-206ENST00000475251 KCNJ5P48544 419 aa11.42□□□□□ -0.58
SKA3-206ENST00000475251 LHX2P50458 406 aa11.42□□□□□ -0.58
SKA3-206ENST00000475251 GFRA1P56159 465 aa11.42□□□□□ -0.58
SKA3-206ENST00000475251 DR1Q01658 176 aa11.42□□□□□ -0.58
SKA3-206ENST00000475251 ZKSCAN8Q15776 578 aaPredicted RBP11.42□□□□□ -0.58
SKA3-206ENST00000475251 PLCZ1Q86YW0 608 aa11.42□□□□□ -0.58
SKA3-206ENST00000475251 RNF175Q8N4F7 328 aa11.42□□□□□ -0.58
SKA3-206ENST00000475251 MEIOBQ8N635 442 aa11.42□□□□□ -0.58
SKA3-206ENST00000475251 CNEP1R1Q8N9A8 125 aa11.42□□□□□ -0.58
SKA3-206ENST00000475251 PPP1R14CQ8TAE6 165 aa11.42□□□□□ -0.58
SKA3-206ENST00000475251 TMEM171Q8WVE6 324 aa11.42□□□□□ -0.58
SKA3-206ENST00000475251 HGDQ93099 445 aa11.42□□□□□ -0.58
SKA3-206ENST00000475251 CTHRC1Q96CG8 243 aa11.42□□□□□ -0.58
SKA3-206ENST00000475251 OMA1Q96E52 524 aa11.42□□□□□ -0.58
SKA3-206ENST00000475251 PGM2Q96G03 612 aa11.42□□□□□ -0.58
SKA3-206ENST00000475251 LCORQ96JN0 433 aaPredicted RBP11.42□□□□□ -0.58
SKA3-206ENST00000475251 SFXN2Q96NB2 322 aa11.42□□□□□ -0.58
SKA3-206ENST00000475251 RBBP8Q99708 897 aa11.42□□□□□ -0.58
SKA3-206ENST00000475251 NXF5Q9H1B4 397 aaKnown RBP11.42□□□□□ -0.58
SKA3-206ENST00000475251 ALG9Q9H6U8 611 aa11.42□□□□□ -0.58
SKA3-206ENST00000475251 GALNT9Q9HCQ5 603 aa11.42□□□□□ -0.58
SKA3-206ENST00000475251 DKKL1Q9UK85 242 aa11.42□□□□□ -0.58
SKA3-206ENST00000475251 MRPS18CQ9Y3D5 142 aaKnown RBP11.42□□□□□ -0.58
SKA3-206ENST00000475251 SLC22A20A6NK97 555 aa11.41□□□□□ -0.58
SKA3-206ENST00000475251 WASHC1A8K0Z3 465 aa11.41□□□□□ -0.58
SKA3-206ENST00000475251 E7ESA3 106 aa11.41□□□□□ -0.58
SKA3-206ENST00000475251 FOXE1O00358 373 aaPredicted RBP11.41□□□□□ -0.58
SKA3-206ENST00000475251 SIAH2O43255 324 aa11.41□□□□□ -0.58
SKA3-206ENST00000475251 GUCY1B2O75343 617 aa11.41□□□□□ -0.58
SKA3-206ENST00000475251 SEC31AO94979 1220 aaKnown RBP11.41□□□□□ -0.58
SKA3-206ENST00000475251 IFNA2P01563 188 aa11.41□□□□□ -0.58
SKA3-206ENST00000475251 CT62P0C5K7 136 aa11.41□□□□□ -0.58
SKA3-206ENST00000475251 CPMP14384 443 aa11.41□□□□□ -0.58
SKA3-206ENST00000475251 PORP16435 677 aaPredicted RBP11.41□□□□□ -0.58
SKA3-206ENST00000475251 GP5P40197 560 aa11.41□□□□□ -0.58
SKA3-206ENST00000475251 PTGDSP41222 190 aa11.41□□□□□ -0.58
SKA3-206ENST00000475251 XKP51811 444 aa11.41□□□□□ -0.58
SKA3-206ENST00000475251 CLDN18P56856 261 aa11.41□□□□□ -0.58
SKA3-206ENST00000475251 EEFSECP57772 596 aaKnown RBP11.41□□□□□ -0.58
SKA3-206ENST00000475251 BCL2A1Q16548 175 aa11.41□□□□□ -0.58
SKA3-206ENST00000475251 RAPH1Q70E73 1250 aa11.41□□□□□ -0.58
SKA3-206ENST00000475251 TBC1D1Q86TI0 1168 aaPredicted RBP11.41□□□□□ -0.58
SKA3-206ENST00000475251 ISCA2Q86U28 154 aa11.41□□□□□ -0.58
SKA3-206ENST00000475251 LRRC8AQ8IWT6 810 aa11.41□□□□□ -0.58
SKA3-206ENST00000475251 ZBED8Q8IZ13 594 aa11.41□□□□□ -0.58
SKA3-206ENST00000475251 TEX9Q8N6V9 391 aa11.41□□□□□ -0.58
SKA3-206ENST00000475251 WDSUB1Q8N9V3 476 aa11.41□□□□□ -0.58
SKA3-206ENST00000475251 RDH11Q8TC12 318 aa11.41□□□□□ -0.58
SKA3-206ENST00000475251 STARD4Q96DR4 205 aa11.41□□□□□ -0.58
SKA3-206ENST00000475251 NODALQ96S42 347 aa11.41□□□□□ -0.58
SKA3-206ENST00000475251 SERPINI1Q99574 410 aa11.41□□□□□ -0.58
SKA3-206ENST00000475251 G6PC3Q9BUM1 346 aa11.41□□□□□ -0.58
SKA3-206ENST00000475251 BRINP2Q9C0B6 783 aa11.41□□□□□ -0.58
SKA3-206ENST00000475251 AHSPQ9NZD4 102 aa11.41□□□□□ -0.58
SKA3-206ENST00000475251 PRODH2Q9UF12 536 aa11.41□□□□□ -0.58
SKA3-206ENST00000475251 BCAP29Q9UHQ4 241 aa11.41□□□□□ -0.58
SKA3-206ENST00000475251 RTTNQ86VV8 2226 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms