RNA–Protein interactions for RNA: ENST00000471978.5

C9orf3-213, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-213ENST00000471978 HSPBAP1Q96EW2 488 aa20.61■□□□□ 0.89
C9orf3-213ENST00000471978 ZNF681Q96N22 645 aa20.61■□□□□ 0.89
C9orf3-213ENST00000471978 HEY2Q9UBP5 337 aa20.61■□□□□ 0.89
C9orf3-213ENST00000471978 MCM8Q9UJA3 840 aa20.61■□□□□ 0.89
C9orf3-213ENST00000471978 UTS2RQ9UKP6 389 aa20.61■□□□□ 0.89
C9orf3-213ENST00000471978 PLLPQ9Y342 182 aa20.61■□□□□ 0.89
C9orf3-213ENST00000471978 SLC6A5Q9Y345 797 aa20.61■□□□□ 0.89
C9orf3-213ENST00000471978 ARHGAP21Q5T5U3 1957 aa20.6■□□□□ 0.89
C9orf3-213ENST00000471978 EXPH5Q8NEV8 1989 aa20.6■□□□□ 0.89
C9orf3-213ENST00000471978 ACOX3O15254 700 aa20.6■□□□□ 0.89
C9orf3-213ENST00000471978 RIPK2O43353 540 aa20.6■□□□□ 0.89
C9orf3-213ENST00000471978 EPPINO95925 133 aa20.6■□□□□ 0.89
C9orf3-213ENST00000471978 CHN1P15882 459 aa20.6■□□□□ 0.89
C9orf3-213ENST00000471978 PCSK2P16519 638 aa20.6■□□□□ 0.89
C9orf3-213ENST00000471978 IMPDH1P20839 514 aa20.6■□□□□ 0.89
C9orf3-213ENST00000471978 ATP5F1P24539 256 aaPredicted RBP20.6■□□□□ 0.89
C9orf3-213ENST00000471978 HMOX2P30519 316 aa20.6■□□□□ 0.89
C9orf3-213ENST00000471978 SOX18P35713 384 aa20.6■□□□□ 0.89
C9orf3-213ENST00000471978 PLCXD2Q0VAA5 305 aa20.6■□□□□ 0.89
C9orf3-213ENST00000471978 TESK1Q15569 626 aa20.6■□□□□ 0.89
C9orf3-213ENST00000471978 VASNQ6EMK4 673 aa20.6■□□□□ 0.89
C9orf3-213ENST00000471978 DESI1Q6ICB0 168 aa20.6■□□□□ 0.89
C9orf3-213ENST00000471978 ARSKQ6UWY0 536 aa20.6■□□□□ 0.89
C9orf3-213ENST00000471978 ANGPTL8Q6UXH0 198 aa20.6■□□□□ 0.89
C9orf3-213ENST00000471978 IFT20Q8IY31 132 aa20.6■□□□□ 0.89
C9orf3-213ENST00000471978 PM20D2Q8IYS1 436 aa20.6■□□□□ 0.89
C9orf3-213ENST00000471978 TNIP2Q8NFZ5 429 aa20.6■□□□□ 0.89
C9orf3-213ENST00000471978 OR1J4Q8NGS1 313 aa20.6■□□□□ 0.89
C9orf3-213ENST00000471978 HGDQ93099 445 aa20.6■□□□□ 0.89
C9orf3-213ENST00000471978 NTNG2Q96CW9 530 aa20.6■□□□□ 0.89
C9orf3-213ENST00000471978 OMA1Q96E52 524 aa20.6■□□□□ 0.89
C9orf3-213ENST00000471978 PRDM14Q9GZV8 571 aa20.6■□□□□ 0.89
C9orf3-213ENST00000471978 PFDN4Q9NQP4 134 aa20.6■□□□□ 0.89
C9orf3-213ENST00000471978 PRODH2Q9UF12 536 aa20.6■□□□□ 0.89
C9orf3-213ENST00000471978 CAMK2AQ9UQM7 478 aa20.6■□□□□ 0.89
C9orf3-213ENST00000471978 L3MBTL1Q9Y468 752 aa20.6■□□□□ 0.89
C9orf3-213ENST00000471978 KDM4EB2RXH2 506 aaPredicted RBP20.59■□□□□ 0.89
C9orf3-213ENST00000471978 ZWINTO95229 277 aa20.59■□□□□ 0.89
C9orf3-213ENST00000471978 IL3P08700 152 aa20.59■□□□□ 0.89
C9orf3-213ENST00000471978 PTPN6P29350 595 aa20.59■□□□□ 0.89
C9orf3-213ENST00000471978 DCAF7P61962 342 aa20.59■□□□□ 0.89
C9orf3-213ENST00000471978 MRPS35P82673 323 aaKnown RBP20.59■□□□□ 0.89
C9orf3-213ENST00000471978 EIPR1Q53HC9 387 aa20.59■□□□□ 0.89
C9orf3-213ENST00000471978 SLC30A6Q6NXT4 461 aa20.59■□□□□ 0.89
C9orf3-213ENST00000471978 TMEM81Q6P7N7 255 aa20.59■□□□□ 0.89
C9orf3-213ENST00000471978 LACC1Q8IV20 430 aa20.59■□□□□ 0.89
C9orf3-213ENST00000471978 SLC22A9Q8IVM8 553 aa20.59■□□□□ 0.89
C9orf3-213ENST00000471978 GBP7Q8N8V2 638 aaPredicted RBP20.59■□□□□ 0.89
C9orf3-213ENST00000471978 NAXEQ8NCW5 288 aa20.59■□□□□ 0.89
C9orf3-213ENST00000471978 NODALQ96S42 347 aa20.59■□□□□ 0.89
C9orf3-213ENST00000471978 ACPTQ9BZG2 426 aa20.59■□□□□ 0.89
C9orf3-213ENST00000471978 EHD3Q9NZN3 535 aa20.59■□□□□ 0.89
C9orf3-213ENST00000471978 DLGAP4Q9Y2H0 992 aa20.59■□□□□ 0.89
C9orf3-213ENST00000471978 STK38LQ9Y2H1 464 aa20.59■□□□□ 0.89
C9orf3-213ENST00000471978 MAP1AP78559 2803 aaPredicted RBP20.58■□□□□ 0.89
C9orf3-213ENST00000471978 GNG14A0A1W2PPG7 69 aa20.58■□□□□ 0.89
C9orf3-213ENST00000471978 GOLGA8RI6L899 631 aa20.58■□□□□ 0.89
C9orf3-213ENST00000471978 DVL2O14641 736 aa20.58■□□□□ 0.89
C9orf3-213ENST00000471978 PCDH7O60245 1069 aa20.58■□□□□ 0.89
C9orf3-213ENST00000471978 ICOSLGO75144 302 aa20.58■□□□□ 0.89
C9orf3-213ENST00000471978 DRD2P14416 443 aa20.58■□□□□ 0.89
C9orf3-213ENST00000471978 BMP7P18075 431 aa20.58■□□□□ 0.89
C9orf3-213ENST00000471978 DRD5P21918 477 aa20.58■□□□□ 0.89
C9orf3-213ENST00000471978 BMP5P22003 454 aa20.58■□□□□ 0.89
C9orf3-213ENST00000471978 CEACAM8P31997 349 aaPredicted RBP20.58■□□□□ 0.89
C9orf3-213ENST00000471978 PPICP45877 212 aa20.58■□□□□ 0.89
C9orf3-213ENST00000471978 EMDP50402 254 aa20.58■□□□□ 0.89
C9orf3-213ENST00000471978 PRKAA2P54646 552 aa20.58■□□□□ 0.89
C9orf3-213ENST00000471978 WNT3P56703 355 aa20.58■□□□□ 0.89
C9orf3-213ENST00000471978 RAE1P78406 368 aaKnown RBP20.58■□□□□ 0.89
C9orf3-213ENST00000471978 SF3B4Q15427 424 aaKnown RBP eCLIP20.58■□□□□ 0.892e-8■■□□□ 13.7
C9orf3-213ENST00000471978 NHSL2Q5HYW2 709 aa20.58■□□□□ 0.89
C9orf3-213ENST00000471978 WIPI1Q5MNZ9 446 aaPredicted RBP20.58■□□□□ 0.89
C9orf3-213ENST00000471978 CCDC116Q8IYX3 515 aa20.58■□□□□ 0.89
C9orf3-213ENST00000471978 OSBPL11Q9BXB4 747 aa20.58■□□□□ 0.89
C9orf3-213ENST00000471978 UGT2B28Q9BY64 529 aa20.58■□□□□ 0.89
C9orf3-213ENST00000471978 GALNT9Q9HCQ5 603 aa20.58■□□□□ 0.89
C9orf3-213ENST00000471978 KLRF1Q9NZS2 232 aa20.58■□□□□ 0.89
C9orf3-213ENST00000471978 ANKHD1Q8IWZ3 2542 aaKnown RBP20.57■□□□□ 0.88
C9orf3-213ENST00000471978 C2orf72A6NCS6 295 aa20.57■□□□□ 0.88
C9orf3-213ENST00000471978 KIF2AO00139 706 aaPredicted RBP20.57■□□□□ 0.88
C9orf3-213ENST00000471978 UGT2B11O75310 529 aa20.57■□□□□ 0.88
C9orf3-213ENST00000471978 UQCRC1P31930 480 aa20.57■□□□□ 0.88
C9orf3-213ENST00000471978 TIMP3P35625 211 aa20.57■□□□□ 0.88
C9orf3-213ENST00000471978 HTR6P50406 440 aa20.57■□□□□ 0.88
C9orf3-213ENST00000471978 HMGCS1Q01581 520 aa20.57■□□□□ 0.88
C9orf3-213ENST00000471978 ACSM2AQ08AH3 577 aa20.57■□□□□ 0.88
C9orf3-213ENST00000471978 LCP2Q13094 533 aa20.57■□□□□ 0.88
C9orf3-213ENST00000471978 SNTA1Q13424 505 aa20.57■□□□□ 0.88
C9orf3-213ENST00000471978 SNTB1Q13884 538 aaKnown RBP20.57■□□□□ 0.88
C9orf3-213ENST00000471978 SPIN4Q56A73 249 aa20.57■□□□□ 0.88
C9orf3-213ENST00000471978 ZNF628Q5EBL2 1059 aa20.57■□□□□ 0.88
C9orf3-213ENST00000471978 ACSM2BQ68CK6 577 aa20.57■□□□□ 0.88
C9orf3-213ENST00000471978 YRDCQ86U90 279 aaKnown RBP20.57■□□□□ 0.88
C9orf3-213ENST00000471978 CEP112Q8N8E3 955 aa20.57■□□□□ 0.88
C9orf3-213ENST00000471978 RELL2Q8NC24 303 aaPredicted RBP20.57■□□□□ 0.88
C9orf3-213ENST00000471978 FAM83FQ8NEG4 500 aaPredicted RBP20.57■□□□□ 0.88
C9orf3-213ENST00000471978 ZNF675Q8TD23 568 aa20.57■□□□□ 0.88
C9orf3-213ENST00000471978 ACMSDQ8TDX5 336 aa20.57■□□□□ 0.88
C9orf3-213ENST00000471978 ABTB1Q969K4 478 aaPredicted RBP20.57■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms