RNA–Protein interactions for RNA: ENST00000470737.1

SEMA3F-208, Transcript of semaphorin 3F, humanhuman

TSL 5

Gene SEMA3F, Length 566 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3F-208ENST00000470737 SERPINI1Q99574 410 aa12.65□□□□□ -0.38
SEMA3F-208ENST00000470737 OSBPL11Q9BXB4 747 aa12.65□□□□□ -0.38
SEMA3F-208ENST00000470737 ACSS3Q9H6R3 686 aa12.65□□□□□ -0.38
SEMA3F-208ENST00000470737 ZNF395Q9H8N7 513 aaPredicted RBP12.65□□□□□ -0.38
SEMA3F-208ENST00000470737 IPPKQ9H8X2 491 aa12.65□□□□□ -0.38
SEMA3F-208ENST00000470737 PSD3Q9NYI0 1048 aa12.65□□□□□ -0.38
SEMA3F-208ENST00000470737 AHSPQ9NZD4 102 aa12.65□□□□□ -0.38
SEMA3F-208ENST00000470737 NINJ2Q9NZG7 142 aa12.65□□□□□ -0.38
SEMA3F-208ENST00000470737 KLRF1Q9NZS2 232 aa12.65□□□□□ -0.38
SEMA3F-208ENST00000470737 NDRG3Q9UGV2 375 aa12.65□□□□□ -0.38
SEMA3F-208ENST00000470737 MED12Q93074 2177 aa12.64□□□□□ -0.39
SEMA3F-208ENST00000470737 DNHD1Q96M86 4753 aa12.64□□□□□ -0.39
SEMA3F-208ENST00000470737 A0A087X1B8 175 aa12.64□□□□□ -0.39
SEMA3F-208ENST00000470737 SH3D21A4FU49 640 aa12.64□□□□□ -0.39
SEMA3F-208ENST00000470737 GOLGA6L10A6NI86 522 aa12.64□□□□□ -0.39
SEMA3F-208ENST00000470737 FOXE1O00358 373 aaPredicted RBP12.64□□□□□ -0.39
SEMA3F-208ENST00000470737 PPM1BO75688 479 aa12.64□□□□□ -0.39
SEMA3F-208ENST00000470737 SEMA3DO95025 777 aa12.64□□□□□ -0.39
SEMA3F-208ENST00000470737 HRGP04196 525 aa12.64□□□□□ -0.39
SEMA3F-208ENST00000470737 CT62P0C5K7 136 aa12.64□□□□□ -0.39
SEMA3F-208ENST00000470737 PORP16435 677 aaPredicted RBP12.64□□□□□ -0.39
SEMA3F-208ENST00000470737 NAGAP17050 411 aa12.64□□□□□ -0.39
SEMA3F-208ENST00000470737 DEKP35659 375 aaKnown RBP12.64□□□□□ -0.39
SEMA3F-208ENST00000470737 ALDH18A1P54886 795 aaKnown RBP12.64□□□□□ -0.39
SEMA3F-208ENST00000470737 EEF1A1P68104 462 aaKnown RBP12.64□□□□□ -0.39
SEMA3F-208ENST00000470737 EEF1A1P5Q5VTE0 462 aa12.64□□□□□ -0.39
SEMA3F-208ENST00000470737 TTC19Q6DKK2 380 aaPredicted RBP12.64□□□□□ -0.39
SEMA3F-208ENST00000470737 KLC3Q6P597 504 aa12.64□□□□□ -0.39
SEMA3F-208ENST00000470737 NUP54Q7Z3B4 507 aa12.64□□□□□ -0.39
SEMA3F-208ENST00000470737 P3H2Q8IVL5 708 aa12.64□□□□□ -0.39
SEMA3F-208ENST00000470737 ZNF615Q8N8J6 731 aa12.64□□□□□ -0.39
SEMA3F-208ENST00000470737 OR14L1PQ8NHC6 308 aa12.64□□□□□ -0.39
SEMA3F-208ENST00000470737 KCTD4Q8WVF5 259 aa12.64□□□□□ -0.39
SEMA3F-208ENST00000470737 SMPDL3BQ92485 455 aa12.64□□□□□ -0.39
SEMA3F-208ENST00000470737 NTNG2Q96CW9 530 aa12.64□□□□□ -0.39
SEMA3F-208ENST00000470737 SMR3AQ99954 134 aa12.64□□□□□ -0.39
SEMA3F-208ENST00000470737 BRINP2Q9C0B6 783 aa12.64□□□□□ -0.39
SEMA3F-208ENST00000470737 CDC42EP4Q9H3Q1 356 aaKnown RBP12.64□□□□□ -0.39
SEMA3F-208ENST00000470737 PIGMQ9H3S5 423 aa12.64□□□□□ -0.39
SEMA3F-208ENST00000470737 GALNT8Q9NY28 637 aa12.64□□□□□ -0.39
SEMA3F-208ENST00000470737 FETUBQ9UGM5 382 aa12.64□□□□□ -0.39
SEMA3F-208ENST00000470737 BCAP29Q9UHQ4 241 aa12.64□□□□□ -0.39
SEMA3F-208ENST00000470737 RNF11Q9Y3C5 154 aa12.64□□□□□ -0.39
SEMA3F-208ENST00000470737 TNPO3Q9Y5L0 923 aaKnown RBP12.64□□□□□ -0.39
SEMA3F-208ENST00000470737 SNPHO15079 494 aa12.63□□□□□ -0.39
SEMA3F-208ENST00000470737 PGRMC2O15173 223 aa12.63□□□□□ -0.39
SEMA3F-208ENST00000470737 GUCY1B2O75343 617 aa12.63□□□□□ -0.39
SEMA3F-208ENST00000470737 CLDN9O95484 217 aa12.63□□□□□ -0.39
SEMA3F-208ENST00000470737 ABCB1P08183 1280 aaPredicted RBP12.63□□□□□ -0.39
SEMA3F-208ENST00000470737 ABHD2P08910 425 aa12.63□□□□□ -0.39
SEMA3F-208ENST00000470737 RHOXF2BP0C7M4 288 aa12.63□□□□□ -0.39
SEMA3F-208ENST00000470737 MTHFD2P13995 350 aa12.63□□□□□ -0.39
SEMA3F-208ENST00000470737 CPMP14384 443 aa12.63□□□□□ -0.39
SEMA3F-208ENST00000470737 CPN1P15169 458 aa12.63□□□□□ -0.39
SEMA3F-208ENST00000470737 CD53P19397 219 aa12.63□□□□□ -0.39
SEMA3F-208ENST00000470737 GPX3P22352 226 aa12.63□□□□□ -0.39
SEMA3F-208ENST00000470737 NEK2P51955 445 aa12.63□□□□□ -0.39
SEMA3F-208ENST00000470737 SRYQ05066 204 aa12.63□□□□□ -0.39
SEMA3F-208ENST00000470737 PLCXD2Q0VAA5 305 aa12.63□□□□□ -0.39
SEMA3F-208ENST00000470737 GAB1Q13480 694 aa12.63□□□□□ -0.39
SEMA3F-208ENST00000470737 NNATQ16517 81 aa12.63□□□□□ -0.39
SEMA3F-208ENST00000470737 TMEM81Q6P7N7 255 aa12.63□□□□□ -0.39
SEMA3F-208ENST00000470737 TRMT10CQ7L0Y3 403 aaKnown RBP12.63□□□□□ -0.39
SEMA3F-208ENST00000470737 GOLGA7Q7Z5G4 137 aa12.63□□□□□ -0.39
SEMA3F-208ENST00000470737 IFNEQ86WN2 208 aa12.63□□□□□ -0.39
SEMA3F-208ENST00000470737 MED12LQ86YW9 2145 aa12.63□□□□□ -0.39
SEMA3F-208ENST00000470737 VWA5B2Q8N398 1253 aa12.63□□□□□ -0.39
SEMA3F-208ENST00000470737 L3MBTL4Q8NA19 623 aa12.63□□□□□ -0.39
SEMA3F-208ENST00000470737 WDR20Q8TBZ3 569 aa12.63□□□□□ -0.39
SEMA3F-208ENST00000470737 WNT2BQ93097 391 aa12.63□□□□□ -0.39
SEMA3F-208ENST00000470737 UCN3Q969E3 161 aa12.63□□□□□ -0.39
SEMA3F-208ENST00000470737 INTS12Q96CB8 462 aaKnown RBP12.63□□□□□ -0.39
SEMA3F-208ENST00000470737 TUBA1CQ9BQE3 449 aa12.63□□□□□ -0.39
SEMA3F-208ENST00000470737 NXF5Q9H1B4 397 aaKnown RBP12.63□□□□□ -0.39
SEMA3F-208ENST00000470737 SERHLQ9NQF3 203 aa12.63□□□□□ -0.39
SEMA3F-208ENST00000470737 CPSF2Q9P2I0 782 aaKnown RBP12.63□□□□□ -0.39
SEMA3F-208ENST00000470737 MAPRE3Q9UPY8 281 aa12.63□□□□□ -0.39
SEMA3F-208ENST00000470737 ARID1AO14497 2285 aa12.62□□□□□ -0.39
SEMA3F-208ENST00000470737 A0A1B0GTL3 188 aa12.62□□□□□ -0.39
SEMA3F-208ENST00000470737 A0A1W2PS29 197 aa12.62□□□□□ -0.39
SEMA3F-208ENST00000470737 ACOX3O15254 700 aa12.62□□□□□ -0.39
SEMA3F-208ENST00000470737 SMPD2O60906 423 aa12.62□□□□□ -0.39
SEMA3F-208ENST00000470737 ICOSLGO75144 302 aa12.62□□□□□ -0.39
SEMA3F-208ENST00000470737 CBR3O75828 277 aa12.62□□□□□ -0.39
SEMA3F-208ENST00000470737 RCBTB2O95199 551 aa12.62□□□□□ -0.39
SEMA3F-208ENST00000470737 HEXAP06865 529 aa12.62□□□□□ -0.39
SEMA3F-208ENST00000470737 KLK1P06870 262 aa12.62□□□□□ -0.39
SEMA3F-208ENST00000470737 CHMP24386 653 aa12.62□□□□□ -0.39
SEMA3F-208ENST00000470737 CPOXP36551 454 aa12.62□□□□□ -0.39
SEMA3F-208ENST00000470737 SLCO1A2P46721 670 aa12.62□□□□□ -0.39
SEMA3F-208ENST00000470737 CCNG1P51959 295 aa12.62□□□□□ -0.39
SEMA3F-208ENST00000470737 FOXF2Q12947 444 aa12.62□□□□□ -0.39
SEMA3F-208ENST00000470737 SNTA1Q13424 505 aa12.62□□□□□ -0.39
SEMA3F-208ENST00000470737 ACAP2Q15057 778 aa12.62□□□□□ -0.39
SEMA3F-208ENST00000470737 CCNYL2Q5T2Q4 361 aa12.62□□□□□ -0.39
SEMA3F-208ENST00000470737 AAGABQ6PD74 315 aa12.62□□□□□ -0.39
SEMA3F-208ENST00000470737 GRAMD2AQ8IUY3 354 aa12.62□□□□□ -0.39
SEMA3F-208ENST00000470737 RDH11Q8TC12 318 aa12.62□□□□□ -0.39
SEMA3F-208ENST00000470737 SLC44A1Q8WWI5 657 aa12.62□□□□□ -0.39
SEMA3F-208ENST00000470737 OMA1Q96E52 524 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms