RNA–Protein interactions for RNA: ENST00000467272.6

UBR4-211, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 891 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-211ENST00000467272 ANKMY2Q8IV38 441 aa11.04□□□□□ -0.64
UBR4-211ENST00000467272 TRIM42Q8IWZ5 723 aa11.04□□□□□ -0.64
UBR4-211ENST00000467272 PRR22Q8IZ63 422 aa11.04□□□□□ -0.64
UBR4-211ENST00000467272 WDR20Q8TBZ3 569 aa11.04□□□□□ -0.64
UBR4-211ENST00000467272 MTERF1Q99551 399 aaKnown RBP11.04□□□□□ -0.64
UBR4-211ENST00000467272 CCL19Q99731 98 aa11.04□□□□□ -0.64
UBR4-211ENST00000467272 GALNT9Q9HCQ5 603 aa11.04□□□□□ -0.64
UBR4-211ENST00000467272 SERHLQ9NQF3 203 aa11.04□□□□□ -0.64
UBR4-211ENST00000467272 NUDT4Q9NZJ9 180 aa11.04□□□□□ -0.64
UBR4-211ENST00000467272 CES1P1Q9UKY3 287 aa11.04□□□□□ -0.64
UBR4-211ENST00000467272 MED12LQ86YW9 2145 aa11.03□□□□□ -0.64
UBR4-211ENST00000467272 GOLGA6L10A0A0M3HER8 536 aa11.03□□□□□ -0.64
UBR4-211ENST00000467272 H0Y3Z8 333 aa11.03□□□□□ -0.64
UBR4-211ENST00000467272 FOXE1O00358 373 aaPredicted RBP11.03□□□□□ -0.64
UBR4-211ENST00000467272 CASKO14936 926 aa11.03□□□□□ -0.64
UBR4-211ENST00000467272 TO15178 435 aa11.03□□□□□ -0.64
UBR4-211ENST00000467272 UGT2B11O75310 529 aa11.03□□□□□ -0.64
UBR4-211ENST00000467272 CPA2P48052 419 aa11.03□□□□□ -0.64
UBR4-211ENST00000467272 STARP49675 285 aa11.03□□□□□ -0.64
UBR4-211ENST00000467272 GAS1P54826 345 aa11.03□□□□□ -0.64
UBR4-211ENST00000467272 DIO3P55073 304 aa11.03□□□□□ -0.64
UBR4-211ENST00000467272 ARL4CP56559 192 aa11.03□□□□□ -0.64
UBR4-211ENST00000467272 NRG3P56975 720 aa11.03□□□□□ -0.64
UBR4-211ENST00000467272 RPS13P62277 151 aaKnown RBP11.03□□□□□ -0.64
UBR4-211ENST00000467272 MAP4K2Q12851 820 aa11.03□□□□□ -0.64
UBR4-211ENST00000467272 PRICKLE4Q2TBC4 344 aa11.03□□□□□ -0.64
UBR4-211ENST00000467272 LIPJQ5W064 366 aa11.03□□□□□ -0.64
UBR4-211ENST00000467272 VWA1Q6PCB0 445 aa11.03□□□□□ -0.64
UBR4-211ENST00000467272 BTLAQ7Z6A9 289 aa11.03□□□□□ -0.64
UBR4-211ENST00000467272 LRRC8AQ8IWT6 810 aa11.03□□□□□ -0.64
UBR4-211ENST00000467272 L3MBTL4Q8NA19 623 aa11.03□□□□□ -0.64
UBR4-211ENST00000467272 STAG3L4Q8TBR4 150 aa11.03□□□□□ -0.64
UBR4-211ENST00000467272 TSPAN17Q96FV3 270 aa11.03□□□□□ -0.64
UBR4-211ENST00000467272 PERPQ96FX8 193 aa11.03□□□□□ -0.64
UBR4-211ENST00000467272 RBBP8Q99708 897 aa11.03□□□□□ -0.64
UBR4-211ENST00000467272 KLHL28Q9NXS3 571 aa11.03□□□□□ -0.64
UBR4-211ENST00000467272 HEY2Q9UBP5 337 aa11.03□□□□□ -0.64
UBR4-211ENST00000467272 PCDHGA11Q9Y5H2 935 aa11.03□□□□□ -0.64
UBR4-211ENST00000467272 C2orf72A6NCS6 295 aa11.02□□□□□ -0.65
UBR4-211ENST00000467272 FAM159BA6NKW6 160 aa11.02□□□□□ -0.65
UBR4-211ENST00000467272 ACOX3O15254 700 aa11.02□□□□□ -0.65
UBR4-211ENST00000467272 UGDHO60701 494 aa11.02□□□□□ -0.65
UBR4-211ENST00000467272 KERAO60938 352 aa11.02□□□□□ -0.65
UBR4-211ENST00000467272 TMCC2O75069 709 aa11.02□□□□□ -0.65
UBR4-211ENST00000467272 SEMA3DO95025 777 aa11.02□□□□□ -0.65
UBR4-211ENST00000467272 CBX7O95931 251 aa11.02□□□□□ -0.65
UBR4-211ENST00000467272 ATP1B1P05026 303 aa11.02□□□□□ -0.65
UBR4-211ENST00000467272 THBDP07204 575 aa11.02□□□□□ -0.65
UBR4-211ENST00000467272 THBS1P07996 1170 aa11.02□□□□□ -0.65
UBR4-211ENST00000467272 CPMP14384 443 aa11.02□□□□□ -0.65
UBR4-211ENST00000467272 STMN1P16949 149 aa11.02□□□□□ -0.65
UBR4-211ENST00000467272 SRD5A2P31213 254 aa11.02□□□□□ -0.65
UBR4-211ENST00000467272 RAP1GDS1P52306 607 aa11.02□□□□□ -0.65
UBR4-211ENST00000467272 RAB10P61026 200 aa11.02□□□□□ -0.65
UBR4-211ENST00000467272 PPP2R2BQ00005 443 aa11.02□□□□□ -0.65
UBR4-211ENST00000467272 HMGCS1Q01581 520 aa11.02□□□□□ -0.65
UBR4-211ENST00000467272 PDIA2Q13087 525 aaKnown RBP11.02□□□□□ -0.65
UBR4-211ENST00000467272 ENPP6Q6UWR7 440 aa11.02□□□□□ -0.65
UBR4-211ENST00000467272 PIK3IP1Q96FE7 263 aa11.02□□□□□ -0.65
UBR4-211ENST00000467272 TMEM204Q9BSN7 226 aa11.02□□□□□ -0.65
UBR4-211ENST00000467272 LRRC1Q9BTT6 524 aa11.02□□□□□ -0.65
UBR4-211ENST00000467272 OSBPL11Q9BXB4 747 aa11.02□□□□□ -0.65
UBR4-211ENST00000467272 ALG9Q9H6U8 611 aa11.02□□□□□ -0.65
UBR4-211ENST00000467272 ELOVL5Q9NYP7 299 aa11.02□□□□□ -0.65
UBR4-211ENST00000467272 ZNF226Q9NYT6 803 aa11.02□□□□□ -0.65
UBR4-211ENST00000467272 TAS2R10Q9NYW0 307 aa11.02□□□□□ -0.65
UBR4-211ENST00000467272 OPTCQ9UBM4 332 aa11.02□□□□□ -0.65
UBR4-211ENST00000467272 FBXL2Q9UKC9 423 aa11.02□□□□□ -0.65
UBR4-211ENST00000467272 SNX12Q9UMY4 172 aa11.02□□□□□ -0.65
UBR4-211ENST00000467272 USF3Q68DE3 2245 aa11.02□□□□□ -0.65
UBR4-211ENST00000467272 FRG2CA6NGY1 282 aa11.01□□□□□ -0.65
UBR4-211ENST00000467272 UBXN8O00124 270 aa11.01□□□□□ -0.65
UBR4-211ENST00000467272 KLF4O43474 513 aa11.01□□□□□ -0.65
UBR4-211ENST00000467272 CD8BP10966 210 aa11.01□□□□□ -0.65
UBR4-211ENST00000467272 EPB42P16452 691 aa11.01□□□□□ -0.65
UBR4-211ENST00000467272 DRD5P21918 477 aa11.01□□□□□ -0.65
UBR4-211ENST00000467272 EMDP50402 254 aa11.01□□□□□ -0.65
UBR4-211ENST00000467272 XKP51811 444 aa11.01□□□□□ -0.65
UBR4-211ENST00000467272 SRYQ05066 204 aa11.01□□□□□ -0.65
UBR4-211ENST00000467272 DDX39BQ13838 428 aaKnown RBP11.01□□□□□ -0.65
UBR4-211ENST00000467272 TOMM20Q15388 145 aa11.01□□□□□ -0.65
UBR4-211ENST00000467272 HLA-DQA1Q5Y7H0 255 aa11.01□□□□□ -0.65
UBR4-211ENST00000467272 SCIMPQ6UWF3 145 aa11.01□□□□□ -0.65
UBR4-211ENST00000467272 SH2D5Q6ZV89 423 aa11.01□□□□□ -0.65
UBR4-211ENST00000467272 IFNEQ86WN2 208 aa11.01□□□□□ -0.65
UBR4-211ENST00000467272 NUDT13Q86X67 352 aa11.01□□□□□ -0.65
UBR4-211ENST00000467272 PLCZ1Q86YW0 608 aa11.01□□□□□ -0.65
UBR4-211ENST00000467272 LRRN4CLQ8ND94 238 aa11.01□□□□□ -0.65
UBR4-211ENST00000467272 OR4K14Q8NGD5 310 aa11.01□□□□□ -0.65
UBR4-211ENST00000467272 OR14L1PQ8NHC6 308 aa11.01□□□□□ -0.65
UBR4-211ENST00000467272 CAVIN3Q969G5 261 aa11.01□□□□□ -0.65
UBR4-211ENST00000467272 OMA1Q96E52 524 aa11.01□□□□□ -0.65
UBR4-211ENST00000467272 SLC35A4Q96G79 324 aa11.01□□□□□ -0.65
UBR4-211ENST00000467272 LCORQ96JN0 433 aaPredicted RBP11.01□□□□□ -0.65
UBR4-211ENST00000467272 CPNE1Q99829 537 aa11.01□□□□□ -0.65
UBR4-211ENST00000467272 CENPKQ9BS16 269 aa11.01□□□□□ -0.65
UBR4-211ENST00000467272 ITPAQ9BY32 194 aa11.01□□□□□ -0.65
UBR4-211ENST00000467272 METTL7AQ9H8H3 244 aa11.01□□□□□ -0.65
UBR4-211ENST00000467272 ACTR8Q9H981 624 aa11.01□□□□□ -0.65
UBR4-211ENST00000467272 UBTD1Q9HAC8 227 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms