RNA–Protein interactions for RNA: ENST00000464541.5

PTCD3-205, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 5

Gene PTCD3, Length 890 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-205ENST00000464541 LY6G6DO95868 133 aa4.33□□□□□ -1.72
PTCD3-205ENST00000464541 OAS1P00973 400 aaKnown RBP4.33□□□□□ -1.72
PTCD3-205ENST00000464541 DUX4L4P0CJ87 422 aa4.33□□□□□ -1.72
PTCD3-205ENST00000464541 HMGCLP35914 325 aa4.33□□□□□ -1.72
PTCD3-205ENST00000464541 MAGEA9P43362 315 aa4.33□□□□□ -1.72
PTCD3-205ENST00000464541 CNN1P51911 297 aaKnown RBP4.33□□□□□ -1.72
PTCD3-205ENST00000464541 C17orf67Q0P5P2 114 aa4.33□□□□□ -1.72
PTCD3-205ENST00000464541 RPA4Q13156 261 aa4.33□□□□□ -1.72
PTCD3-205ENST00000464541 PLBD1Q6P4A8 553 aa4.33□□□□□ -1.72
PTCD3-205ENST00000464541 SNX21Q969T3 373 aa4.33□□□□□ -1.72
PTCD3-205ENST00000464541 VNN3Q9NY84 501 aa4.33□□□□□ -1.72
PTCD3-205ENST00000464541 IKZF3Q9UKT9 509 aa4.33□□□□□ -1.72
PTCD3-205ENST00000464541 TRBV2A0A0J9YWF9 115 aa4.32□□□□□ -1.72
PTCD3-205ENST00000464541 HAT1O14929 419 aa4.32□□□□□ -1.72
PTCD3-205ENST00000464541 CFLARO15519 480 aa4.32□□□□□ -1.72
PTCD3-205ENST00000464541 BUB1O43683 1085 aa4.32□□□□□ -1.72
PTCD3-205ENST00000464541 TYROBPO43914 113 aa4.32□□□□□ -1.72
PTCD3-205ENST00000464541 GSTA1P08263 222 aa4.32□□□□□ -1.72
PTCD3-205ENST00000464541 SAA4P35542 130 aa4.32□□□□□ -1.72
PTCD3-205ENST00000464541 TRIM23P36406 574 aa4.32□□□□□ -1.72
PTCD3-205ENST00000464541 PEX19P40855 299 aa4.32□□□□□ -1.72
PTCD3-205ENST00000464541 MDH2P40926 338 aaKnown RBP4.32□□□□□ -1.72
PTCD3-205ENST00000464541 PPP1R8Q12972 351 aaKnown RBP4.32□□□□□ -1.72
PTCD3-205ENST00000464541 GSG1Q2KHT4 349 aa4.32□□□□□ -1.72
PTCD3-205ENST00000464541 MS4A13Q5J8X5 152 aa4.32□□□□□ -1.72
PTCD3-205ENST00000464541 TCHHL1Q5QJ38 904 aaPredicted RBP4.32□□□□□ -1.72
PTCD3-205ENST00000464541 CNSTQ6PJW8 725 aa4.32□□□□□ -1.72
PTCD3-205ENST00000464541 DLEU7Q6UYE1 221 aa4.32□□□□□ -1.72
PTCD3-205ENST00000464541 VASH2Q86V25 355 aa4.32□□□□□ -1.72
PTCD3-205ENST00000464541 ERICH1Q86X53 443 aa4.32□□□□□ -1.72
PTCD3-205ENST00000464541 PEX5LQ8IYB4 626 aa4.32□□□□□ -1.72
PTCD3-205ENST00000464541 PYROXD2Q8N2H3 581 aa4.32□□□□□ -1.72
PTCD3-205ENST00000464541 C11orf42Q8N5U0 333 aa4.32□□□□□ -1.72
PTCD3-205ENST00000464541 ZNF671Q8TAW3 534 aa4.32□□□□□ -1.72
PTCD3-205ENST00000464541 ANP32EQ9BTT0 268 aa4.32□□□□□ -1.72
PTCD3-205ENST00000464541 DEFB126Q9BYW3 111 aa4.32□□□□□ -1.72
PTCD3-205ENST00000464541 ABCG4Q9H172 646 aa4.32□□□□□ -1.72
PTCD3-205ENST00000464541 ADGRL4Q9HBW9 690 aa4.32□□□□□ -1.72
PTCD3-205ENST00000464541 ZNF275Q9NSD4 429 aaPredicted RBP4.32□□□□□ -1.72
PTCD3-205ENST00000464541 TRIM10Q9UDY6 481 aa4.32□□□□□ -1.72
PTCD3-205ENST00000464541 Q9UF83 564 aa4.32□□□□□ -1.72
PTCD3-205ENST00000464541 RNF115Q9Y4L5 304 aa4.32□□□□□ -1.72
PTCD3-205ENST00000464541 TRIM64CA6NLI5 447 aa4.31□□□□□ -1.72
PTCD3-205ENST00000464541 EFCAB7A8K855 629 aa4.31□□□□□ -1.72
PTCD3-205ENST00000464541 MPHOSPH10O00566 681 aaKnown RBP4.31□□□□□ -1.72
PTCD3-205ENST00000464541 GPAA1O43292 621 aa4.31□□□□□ -1.72
PTCD3-205ENST00000464541 MARCKSP29966 332 aaPredicted RBP4.31□□□□□ -1.72
PTCD3-205ENST00000464541 HPDP32754 393 aaPredicted RBP4.31□□□□□ -1.72
PTCD3-205ENST00000464541 CASP9P55211 416 aa4.31□□□□□ -1.72
PTCD3-205ENST00000464541 CXCL6P80162 114 aa4.31□□□□□ -1.72
PTCD3-205ENST00000464541 ZNF85Q03923 595 aa4.31□□□□□ -1.72
PTCD3-205ENST00000464541 SFRP1Q8N474 314 aa4.31□□□□□ -1.72
PTCD3-205ENST00000464541 MLKLQ8NB16 471 aa4.31□□□□□ -1.72
PTCD3-205ENST00000464541 SPC24Q8NBT2 197 aa4.31□□□□□ -1.72
PTCD3-205ENST00000464541 TMEM37Q8WXS4 190 aa4.31□□□□□ -1.72
PTCD3-205ENST00000464541 CYYR1Q96J86 154 aa4.31□□□□□ -1.72
PTCD3-205ENST00000464541 B3GALT6Q96L58 329 aa4.31□□□□□ -1.72
PTCD3-205ENST00000464541 ESM1Q9NQ30 184 aa4.31□□□□□ -1.72
PTCD3-205ENST00000464541 HPS4Q9NQG7 708 aa4.31□□□□□ -1.72
PTCD3-205ENST00000464541 STARD5Q9NSY2 213 aa4.31□□□□□ -1.72
PTCD3-205ENST00000464541 CYP39A1Q9NYL5 469 aa4.31□□□□□ -1.72
PTCD3-205ENST00000464541 TRMT6Q9UJA5 497 aaKnown RBP4.31□□□□□ -1.72
PTCD3-205ENST00000464541 MOSPD1Q9UJG1 213 aa4.31□□□□□ -1.72
PTCD3-205ENST00000464541 NTNG1Q9Y2I2 539 aa4.31□□□□□ -1.72
PTCD3-205ENST00000464541 ZNF175Q9Y473 711 aa4.31□□□□□ -1.72
PTCD3-205ENST00000464541 IKBKGQ9Y6K9 419 aa4.31□□□□□ -1.72
PTCD3-205ENST00000464541 CROCCQ5TZA2 2017 aa4.3□□□□□ -1.72
PTCD3-205ENST00000464541 IGHV3-35A0A0C4DH35 117 aa4.3□□□□□ -1.72
PTCD3-205ENST00000464541 PDLIM1O00151 329 aa4.3□□□□□ -1.72
PTCD3-205ENST00000464541 TLR4O00206 839 aa4.3□□□□□ -1.72
PTCD3-205ENST00000464541 SYNGR4O95473 234 aa4.3□□□□□ -1.72
PTCD3-205ENST00000464541 HOXB7P09629 217 aa4.3□□□□□ -1.72
PTCD3-205ENST00000464541 LAMP1P11279 417 aa4.3□□□□□ -1.72
PTCD3-205ENST00000464541 GDF1P27539 372 aa4.3□□□□□ -1.72
PTCD3-205ENST00000464541 PITPNBP48739 271 aa4.3□□□□□ -1.72
PTCD3-205ENST00000464541 ARHGDIBP52566 201 aa4.3□□□□□ -1.72
PTCD3-205ENST00000464541 ERVPABLB-1P60509 514 aa4.3□□□□□ -1.72
PTCD3-205ENST00000464541 GALK2Q01415 458 aa4.3□□□□□ -1.72
PTCD3-205ENST00000464541 PKN2Q16513 984 aaKnown RBP4.3□□□□□ -1.72
PTCD3-205ENST00000464541 CLPPQ16740 277 aaPredicted RBP4.3□□□□□ -1.72
PTCD3-205ENST00000464541 SEL1L2Q5TEA6 688 aa4.3□□□□□ -1.72
PTCD3-205ENST00000464541 PRAMEF7Q5VXH5 474 aa4.3□□□□□ -1.72
PTCD3-205ENST00000464541 TATDN1Q6P1N9 297 aa4.3□□□□□ -1.72
PTCD3-205ENST00000464541 CNTN4Q8IWV2 1026 aa4.3□□□□□ -1.72
PTCD3-205ENST00000464541 BADQ92934 168 aa4.3□□□□□ -1.72
PTCD3-205ENST00000464541 RAB3CQ96E17 227 aa4.3□□□□□ -1.72
PTCD3-205ENST00000464541 CABS1Q96KC9 395 aa4.3□□□□□ -1.72
PTCD3-205ENST00000464541 OR5M11Q96RB7 305 aa4.3□□□□□ -1.72
PTCD3-205ENST00000464541 TEX13AQ9BXU3 409 aaPredicted RBP4.3□□□□□ -1.72
PTCD3-205ENST00000464541 YTHDF1Q9BYJ9 559 aaKnown RBP4.3□□□□□ -1.72
PTCD3-205ENST00000464541 FAM124BQ9H5Z6 455 aaPredicted RBP4.3□□□□□ -1.72
PTCD3-205ENST00000464541 XPO7Q9UIA9 1087 aaKnown RBP4.3□□□□□ -1.72
PTCD3-205ENST00000464541 ZNF256Q9Y2P7 627 aaPredicted RBP4.3□□□□□ -1.72
PTCD3-205ENST00000464541 MACROD2A1Z1Q3 448 aa4.29□□□□□ -1.72
PTCD3-205ENST00000464541 CCDC69A6NI79 296 aa4.29□□□□□ -1.72
PTCD3-205ENST00000464541 A8MX80 341 aa4.29□□□□□ -1.72
PTCD3-205ENST00000464541 HSF2BPO75031 334 aa4.29□□□□□ -1.72
PTCD3-205ENST00000464541 LRP3O75074 770 aa4.29□□□□□ -1.72
PTCD3-205ENST00000464541 CXCL14O95715 111 aa4.29□□□□□ -1.72
PTCD3-205ENST00000464541 ECDO95905 644 aaPredicted RBP4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms