RNA–Protein interactions for RNA: ENST00000464275.5

PDLIM2-216, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2 BASIC

Gene PDLIM2, Length 1,995 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-216ENST00000464275 S100ZQ8WXG8 99 aa20.41■□□□□ 0.86
PDLIM2-216ENST00000464275 KAT2AQ92830 837 aa20.41■□□□□ 0.86
PDLIM2-216ENST00000464275 CCDC3Q9BQI4 270 aa20.41■□□□□ 0.86
PDLIM2-216ENST00000464275 RSPO3Q9BXY4 272 aaPredicted RBP20.41■□□□□ 0.86
PDLIM2-216ENST00000464275 PAK1IP1Q9NWT1 392 aaPredicted RBP20.41■□□□□ 0.86
PDLIM2-216ENST00000464275 DNAJB6O75190 326 aa20.41■□□□□ 0.86
PDLIM2-216ENST00000464275 CCNB2O95067 398 aa20.41■□□□□ 0.86
PDLIM2-216ENST00000464275 ZBTB11O95625 1053 aaPredicted RBP20.41■□□□□ 0.86
PDLIM2-216ENST00000464275 FOSL2P15408 326 aa20.41■□□□□ 0.86
PDLIM2-216ENST00000464275 ACVR2AP27037 513 aa20.41■□□□□ 0.86
PDLIM2-216ENST00000464275 OLR1P78380 273 aa20.41■□□□□ 0.86
PDLIM2-216ENST00000464275 SIM1P81133 766 aaPredicted RBP20.41■□□□□ 0.86
PDLIM2-216ENST00000464275 EMX1Q04741 257 aaPredicted RBP20.41■□□□□ 0.86
PDLIM2-216ENST00000464275 FUT5Q11128 374 aa20.41■□□□□ 0.86
PDLIM2-216ENST00000464275 GANABQ14697 944 aaKnown RBP20.41■□□□□ 0.86
PDLIM2-216ENST00000464275 ZNF846Q147U1 533 aa20.41■□□□□ 0.86
PDLIM2-216ENST00000464275 SYT6Q5T7P8 510 aaPredicted RBP20.41■□□□□ 0.86
PDLIM2-216ENST00000464275 B3GNT8Q7Z7M8 397 aa20.41■□□□□ 0.86
PDLIM2-216ENST00000464275 PHF10Q8WUB8 498 aaKnown RBP20.41■□□□□ 0.86
PDLIM2-216ENST00000464275 SGCDQ92629 289 aa20.41■□□□□ 0.86
PDLIM2-216ENST00000464275 VMP1Q96GC9 406 aa20.41■□□□□ 0.86
PDLIM2-216ENST00000464275 ACTRT3Q9BYD9 372 aa20.41■□□□□ 0.86
PDLIM2-216ENST00000464275 WDR12Q9GZL7 423 aaKnown RBP20.41■□□□□ 0.86
PDLIM2-216ENST00000464275 MIR1-1HGQ9H1L0 117 aa20.41■□□□□ 0.86
PDLIM2-216ENST00000464275 RHBDL2Q9NX52 303 aa20.41■□□□□ 0.86
PDLIM2-216ENST00000464275 HCN4Q9Y3Q4 1203 aa20.41■□□□□ 0.86
PDLIM2-216ENST00000464275 GIMAP1-GIMAP5A0A087WTJ2 511 aa20.4■□□□□ 0.86
PDLIM2-216ENST00000464275 ARRDC5A6NEK1 342 aa20.4■□□□□ 0.86
PDLIM2-216ENST00000464275 PTGES3LE9PB15 166 aa20.4■□□□□ 0.86
PDLIM2-216ENST00000464275 PCDH17O14917 1159 aa20.4■□□□□ 0.86
PDLIM2-216ENST00000464275 GALR3O60755 368 aaPredicted RBP20.4■□□□□ 0.86
PDLIM2-216ENST00000464275 CHRM4P08173 479 aa20.4■□□□□ 0.86
PDLIM2-216ENST00000464275 MAN2A2P49641 1150 aa20.4■□□□□ 0.86
PDLIM2-216ENST00000464275 RPP38P78345 283 aaKnown RBP20.4■□□□□ 0.86
PDLIM2-216ENST00000464275 CTF1Q16619 201 aa20.4■□□□□ 0.86
PDLIM2-216ENST00000464275 PROX2Q3B8N5 592 aa20.4■□□□□ 0.86
PDLIM2-216ENST00000464275 GPAT3Q53EU6 434 aa20.4■□□□□ 0.86
PDLIM2-216ENST00000464275 COLEC12Q5KU26 742 aa20.4■□□□□ 0.86
PDLIM2-216ENST00000464275 C19orf47Q8N9M1 422 aaKnown RBP20.4■□□□□ 0.86
PDLIM2-216ENST00000464275 GIMAP5Q96F15 307 aa20.4■□□□□ 0.86
PDLIM2-216ENST00000464275 OTUB1Q96FW1 271 aaPredicted RBP20.4■□□□□ 0.86
PDLIM2-216ENST00000464275 LDHAL6BQ9BYZ2 381 aaPredicted RBP20.4■□□□□ 0.86
PDLIM2-216ENST00000464275 CCDC90BQ9GZT6 254 aa20.4■□□□□ 0.86
PDLIM2-216ENST00000464275 HMG20AQ9NP66 347 aa20.4■□□□□ 0.86
PDLIM2-216ENST00000464275 CALML5Q9NZT1 146 aa20.4■□□□□ 0.86
PDLIM2-216ENST00000464275 LIPT1Q9Y234 373 aa20.4■□□□□ 0.86
PDLIM2-216ENST00000464275 KNL1Q8NG31 2342 aa20.4■□□□□ 0.86
PDLIM2-216ENST00000464275 ZNF860A6NHJ4 632 aa20.39■□□□□ 0.86
PDLIM2-216ENST00000464275 CPMP14384 443 aa20.39■□□□□ 0.86
PDLIM2-216ENST00000464275 SERPINB10P48595 397 aa20.39■□□□□ 0.86
PDLIM2-216ENST00000464275 SLC36A4Q6YBV0 504 aa20.39■□□□□ 0.86
PDLIM2-216ENST00000464275 CNIH3Q8TBE1 160 aa20.39■□□□□ 0.86
PDLIM2-216ENST00000464275 CLDN23Q96B33 292 aa20.39■□□□□ 0.86
PDLIM2-216ENST00000464275 HRASLS5Q96KN8 279 aa20.39■□□□□ 0.86
PDLIM2-216ENST00000464275 SPACA7Q96KW9 195 aa20.39■□□□□ 0.86
PDLIM2-216ENST00000464275 ALPK1Q96QP1 1244 aa20.39■□□□□ 0.86
PDLIM2-216ENST00000464275 TBC1D17Q9HA65 648 aa20.39■□□□□ 0.86
PDLIM2-216ENST00000464275 ZNF556Q9HAH1 456 aa20.39■□□□□ 0.86
PDLIM2-216ENST00000464275 FAM60AQ9NP50 221 aa20.39■□□□□ 0.86
PDLIM2-216ENST00000464275 LILRA5A6NI73 299 aa20.39■□□□□ 0.85
PDLIM2-216ENST00000464275 PORP16435 677 aaPredicted RBP20.39■□□□□ 0.85
PDLIM2-216ENST00000464275 MAD2L1BPQ15013 274 aaPredicted RBP20.39■□□□□ 0.85
PDLIM2-216ENST00000464275 NPTX1Q15818 432 aa20.39■□□□□ 0.85
PDLIM2-216ENST00000464275 PRSS48Q7RTY5 328 aa20.39■□□□□ 0.85
PDLIM2-216ENST00000464275 PRSS41Q7RTY9 318 aa20.39■□□□□ 0.85
PDLIM2-216ENST00000464275 TAGAPQ8N103 731 aa20.39■□□□□ 0.85
PDLIM2-216ENST00000464275 CA13Q8N1Q1 262 aa20.39■□□□□ 0.85
PDLIM2-216ENST00000464275 OR7G2Q8NG99 324 aa20.39■□□□□ 0.85
PDLIM2-216ENST00000464275 COL26A1Q96A83 441 aa20.39■□□□□ 0.85
PDLIM2-216ENST00000464275 HSPA12BQ96MM6 686 aa20.39■□□□□ 0.85
PDLIM2-216ENST00000464275 MS4A4EQ96PG1 132 aa20.39■□□□□ 0.85
PDLIM2-216ENST00000464275 EQTNQ9NQ60 294 aa20.39■□□□□ 0.85
PDLIM2-216ENST00000464275 TMEM74BQ9NUR3 256 aa20.39■□□□□ 0.85
PDLIM2-216ENST00000464275 RLIMQ9NVW2 624 aa20.39■□□□□ 0.85
PDLIM2-216ENST00000464275 PTGFRNQ9P2B2 879 aa20.39■□□□□ 0.85
PDLIM2-216ENST00000464275 ERGIC3Q9Y282 383 aa20.39■□□□□ 0.85
PDLIM2-216ENST00000464275 KCNE3Q9Y6H6 103 aa20.39■□□□□ 0.85
PDLIM2-216ENST00000464275 DUXAA6NLW8 204 aa20.38■□□□□ 0.85
PDLIM2-216ENST00000464275 CLDN25C9JDP6 229 aa20.38■□□□□ 0.85
PDLIM2-216ENST00000464275 FFAR1O14842 300 aa20.38■□□□□ 0.85
PDLIM2-216ENST00000464275 RGS10O43665 173 aa20.38■□□□□ 0.85
PDLIM2-216ENST00000464275 INMTO95050 263 aa20.38■□□□□ 0.85
PDLIM2-216ENST00000464275 PROS1P07225 676 aa20.38■□□□□ 0.85
PDLIM2-216ENST00000464275 EPHA2P29317 976 aa20.38■□□□□ 0.85
PDLIM2-216ENST00000464275 ST13P50502 369 aaKnown RBP20.38■□□□□ 0.85
PDLIM2-216ENST00000464275 NXPH1P58417 271 aa20.38■□□□□ 0.85
PDLIM2-216ENST00000464275 NR1D2Q14995 579 aa20.38■□□□□ 0.85
PDLIM2-216ENST00000464275 SPCS2Q15005 226 aa20.38■□□□□ 0.85
PDLIM2-216ENST00000464275 RGS21Q2M5E4 152 aa20.38■□□□□ 0.85
PDLIM2-216ENST00000464275 ATAD3BQ5T9A4 648 aa20.38■□□□□ 0.85
PDLIM2-216ENST00000464275 TCTN3Q6NUS6 607 aa20.38■□□□□ 0.85
PDLIM2-216ENST00000464275 DCDC5Q6ZRR9 648 aa20.38■□□□□ 0.85
PDLIM2-216ENST00000464275 OR4N5Q8IXE1 308 aa20.38■□□□□ 0.85
PDLIM2-216ENST00000464275 SDR16C5Q8N3Y7 309 aa20.38■□□□□ 0.85
PDLIM2-216ENST00000464275 SLC15A4Q8N697 577 aa20.38■□□□□ 0.85
PDLIM2-216ENST00000464275 VANGL1Q8TAA9 524 aaPredicted RBP20.38■□□□□ 0.85
PDLIM2-216ENST00000464275 FCGR1BQ92637 280 aa20.38■□□□□ 0.85
PDLIM2-216ENST00000464275 DHRS1Q96LJ7 313 aa20.38■□□□□ 0.85
PDLIM2-216ENST00000464275 IL21RQ9HBE5 538 aa20.38■□□□□ 0.85
PDLIM2-216ENST00000464275 GIN1Q9NXP7 522 aa20.38■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms