RNA–Protein interactions for RNA: ENST00000461798.5

BRCA1-207, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 3

Gene BRCA1, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-207ENST00000461798 SAMD14Q8IZD0 417 aaPredicted RBP8.39□□□□□ -1.07
BRCA1-207ENST00000461798 MMP21Q8N119 569 aa8.39□□□□□ -1.07
BRCA1-207ENST00000461798 VWA5B2Q8N398 1253 aa8.39□□□□□ -1.07
BRCA1-207ENST00000461798 CDYL2Q8N8U2 506 aa8.39□□□□□ -1.07
BRCA1-207ENST00000461798 ZNF675Q8TD23 568 aa8.39□□□□□ -1.07
BRCA1-207ENST00000461798 HGDQ93099 445 aa8.39□□□□□ -1.07
BRCA1-207ENST00000461798 ERP27Q96DN0 273 aa8.39□□□□□ -1.07
BRCA1-207ENST00000461798 CCDC126Q96EE4 140 aa8.39□□□□□ -1.07
BRCA1-207ENST00000461798 CNRIP1Q96F85 164 aaPredicted RBP8.39□□□□□ -1.07
BRCA1-207ENST00000461798 TMEM41AQ96HV5 264 aa8.39□□□□□ -1.07
BRCA1-207ENST00000461798 LCORQ96JN0 433 aaPredicted RBP8.39□□□□□ -1.07
BRCA1-207ENST00000461798 ZNF597Q96LX8 424 aa8.39□□□□□ -1.07
BRCA1-207ENST00000461798 PRR14Q9BWN1 585 aa8.39□□□□□ -1.07
BRCA1-207ENST00000461798 NXF5Q9H1B4 397 aaKnown RBP8.39□□□□□ -1.07
BRCA1-207ENST00000461798 SLC24A3Q9HC58 644 aa8.39□□□□□ -1.07
BRCA1-207ENST00000461798 PSMC3IPQ9P2W1 217 aaPredicted RBP8.39□□□□□ -1.07
BRCA1-207ENST00000461798 TNFRSF10DQ9UBN6 386 aa8.39□□□□□ -1.07
BRCA1-207ENST00000461798 HEY2Q9UBP5 337 aa8.39□□□□□ -1.07
BRCA1-207ENST00000461798 Q9UFV3 132 aa8.39□□□□□ -1.07
BRCA1-207ENST00000461798 ZNF780BQ9Y6R6 833 aa8.39□□□□□ -1.07
BRCA1-207ENST00000461798 CCDC151A5D8V7 595 aa8.38□□□□□ -1.07
BRCA1-207ENST00000461798 NKX2-6A6NCS4 301 aa8.38□□□□□ -1.07
BRCA1-207ENST00000461798 FAM181BA6NEQ2 426 aa8.38□□□□□ -1.07
BRCA1-207ENST00000461798 G3V2L1 256 aa8.38□□□□□ -1.07
BRCA1-207ENST00000461798 H3BQF6 201 aa8.38□□□□□ -1.07
BRCA1-207ENST00000461798 ERAL1O75616 437 aaKnown RBP8.38□□□□□ -1.07
BRCA1-207ENST00000461798 BCAS2O75934 225 aaPredicted RBP8.38□□□□□ -1.07
BRCA1-207ENST00000461798 ESRRBO95718 433 aa8.38□□□□□ -1.07
BRCA1-207ENST00000461798 EPPINO95925 133 aa8.38□□□□□ -1.07
BRCA1-207ENST00000461798 ENO1P06733 434 aaKnown RBP8.38□□□□□ -1.07
BRCA1-207ENST00000461798 HMOX2P30519 316 aa8.38□□□□□ -1.07
BRCA1-207ENST00000461798 ADH7P40394 386 aa8.38□□□□□ -1.07
BRCA1-207ENST00000461798 GSTM5P46439 218 aa8.38□□□□□ -1.07
BRCA1-207ENST00000461798 EMDP50402 254 aa8.38□□□□□ -1.07
BRCA1-207ENST00000461798 KRTAP10-9P60411 292 aa8.38□□□□□ -1.07
BRCA1-207ENST00000461798 PSPHP78330 225 aa8.38□□□□□ -1.07
BRCA1-207ENST00000461798 RAE1P78406 368 aaKnown RBP8.38□□□□□ -1.07
BRCA1-207ENST00000461798 TLE4Q04727 773 aa8.38□□□□□ -1.07
BRCA1-207ENST00000461798 DUSP2Q05923 314 aa8.38□□□□□ -1.07
BRCA1-207ENST00000461798 CRYZQ08257 329 aaKnown RBP8.38□□□□□ -1.07
BRCA1-207ENST00000461798 SNTA1Q13424 505 aa8.38□□□□□ -1.07
BRCA1-207ENST00000461798 SLC25A35Q3KQZ1 300 aa8.38□□□□□ -1.07
BRCA1-207ENST00000461798 TRMT12Q53H54 448 aaKnown RBP8.38□□□□□ -1.07
BRCA1-207ENST00000461798 SPIN4Q56A73 249 aa8.38□□□□□ -1.07
BRCA1-207ENST00000461798 ZNF628Q5EBL2 1059 aa8.38□□□□□ -1.07
BRCA1-207ENST00000461798 TCHHL1Q5QJ38 904 aaPredicted RBP8.38□□□□□ -1.07
BRCA1-207ENST00000461798 TIGD3Q6B0B8 471 aa8.38□□□□□ -1.07
BRCA1-207ENST00000461798 VASNQ6EMK4 673 aa8.38□□□□□ -1.07
BRCA1-207ENST00000461798 SLC30A6Q6NXT4 461 aa8.38□□□□□ -1.07
BRCA1-207ENST00000461798 SEM1Q6ZVN7 128 aa8.38□□□□□ -1.07
BRCA1-207ENST00000461798 LIX1LQ8IVB5 337 aa8.38□□□□□ -1.07
BRCA1-207ENST00000461798 ULK2Q8IYT8 1036 aa8.38□□□□□ -1.07
BRCA1-207ENST00000461798 KLHL29Q96CT2 875 aa8.38□□□□□ -1.07
BRCA1-207ENST00000461798 RILPQ96NA2 401 aa8.38□□□□□ -1.07
BRCA1-207ENST00000461798 HBEGFQ99075 208 aa8.38□□□□□ -1.07
BRCA1-207ENST00000461798 TIMP4Q99727 224 aa8.38□□□□□ -1.07
BRCA1-207ENST00000461798 ACPTQ9BZG2 426 aa8.38□□□□□ -1.07
BRCA1-207ENST00000461798 SHCBP1LQ9BZQ2 653 aa8.38□□□□□ -1.07
BRCA1-207ENST00000461798 BRINP2Q9C0B6 783 aa8.38□□□□□ -1.07
BRCA1-207ENST00000461798 PRDM14Q9GZV8 571 aa8.38□□□□□ -1.07
BRCA1-207ENST00000461798 SLC6A15Q9H2J7 730 aa8.38□□□□□ -1.07
BRCA1-207ENST00000461798 GSTO2Q9H4Y5 243 aa8.38□□□□□ -1.07
BRCA1-207ENST00000461798 EXO5Q9H790 373 aa8.38□□□□□ -1.07
BRCA1-207ENST00000461798 EHD3Q9NZN3 535 aa8.38□□□□□ -1.07
BRCA1-207ENST00000461798 PRODH2Q9UF12 536 aa8.38□□□□□ -1.07
BRCA1-207ENST00000461798 KCNN3Q9UGI6 736 aa8.38□□□□□ -1.07
BRCA1-207ENST00000461798 UTS2RQ9UKP6 389 aa8.38□□□□□ -1.07
BRCA1-207ENST00000461798 EMCNQ9ULC0 261 aa8.38□□□□□ -1.07
BRCA1-207ENST00000461798 DTX4Q9Y2E6 619 aa8.38□□□□□ -1.07
BRCA1-207ENST00000461798 DLGAP4Q9Y2H0 992 aa8.38□□□□□ -1.07
BRCA1-207ENST00000461798 GPR55Q9Y2T6 319 aaPredicted RBP8.38□□□□□ -1.07
BRCA1-207ENST00000461798 C15orf41Q9Y2V0 281 aa8.38□□□□□ -1.07
BRCA1-207ENST00000461798 WBP11Q9Y2W2 641 aaKnown RBP8.38□□□□□ -1.07
BRCA1-207ENST00000461798 CSMD1Q96PZ7 3565 aa8.38□□□□□ -1.07
BRCA1-207ENST00000461798 POLQO75417 2590 aa8.37□□□□□ -1.07
BRCA1-207ENST00000461798 FAM90A27PA6NNH2 459 aa8.37□□□□□ -1.07
BRCA1-207ENST00000461798 HSPB2A8KAH6 182 aa8.37□□□□□ -1.07
BRCA1-207ENST00000461798 GOLGA8RI6L899 631 aa8.37□□□□□ -1.07
BRCA1-207ENST00000461798 SYT5O00445 386 aa8.37□□□□□ -1.07
BRCA1-207ENST00000461798 UBFD1O14562 309 aaKnown RBP8.37□□□□□ -1.07
BRCA1-207ENST00000461798 IL3P08700 152 aa8.37□□□□□ -1.07
BRCA1-207ENST00000461798 RHOXF2BP0C7M4 288 aa8.37□□□□□ -1.07
BRCA1-207ENST00000461798 PCSK2P16519 638 aa8.37□□□□□ -1.07
BRCA1-207ENST00000461798 KRT15P19012 456 aa8.37□□□□□ -1.07
BRCA1-207ENST00000461798 GDF1P27539 372 aa8.37□□□□□ -1.07
BRCA1-207ENST00000461798 PTPN6P29350 595 aa8.37□□□□□ -1.07
BRCA1-207ENST00000461798 TIA1P31483 386 aaKnown RBP eCLIP8.37□□□□□ -1.07
BRCA1-207ENST00000461798 CEACAM8P31997 349 aaPredicted RBP8.37□□□□□ -1.07
BRCA1-207ENST00000461798 TIMP3P35625 211 aa8.37□□□□□ -1.07
BRCA1-207ENST00000461798 PTGDSP41222 190 aa8.37□□□□□ -1.07
BRCA1-207ENST00000461798 HTR6P50406 440 aa8.37□□□□□ -1.07
BRCA1-207ENST00000461798 DNAJB13P59910 316 aa8.37□□□□□ -1.07
BRCA1-207ENST00000461798 ACSM2AQ08AH3 577 aa8.37□□□□□ -1.07
BRCA1-207ENST00000461798 HEPACAMQ14CZ8 416 aa8.37□□□□□ -1.07
BRCA1-207ENST00000461798 EXOSC7Q15024 291 aaKnown RBP8.37□□□□□ -1.07
BRCA1-207ENST00000461798 SF3B4Q15427 424 aaKnown RBP eCLIP8.37□□□□□ -1.07
BRCA1-207ENST00000461798 HSPB2Q16082 182 aa8.37□□□□□ -1.07
BRCA1-207ENST00000461798 FAM219BQ5XKK7 198 aa8.37□□□□□ -1.07
BRCA1-207ENST00000461798 ACSM2BQ68CK6 577 aa8.37□□□□□ -1.07
BRCA1-207ENST00000461798 BICRALQ6AI39 1079 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms